Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d018388_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:5:219784860:219785621:1 gene:Zm00001d018388 gene_biotype:protein_coding transcript_biotype:protein_coding description:Alginate regulatory protein AlgP

Sequence

ATGGCCACGGCGGTTCTCAGATCCCACGATGCGCTCAACAACCGCCTGCATCTCGACGCG
TACACCCCGTCCCCGGCGAAGCCGCGCCGGCGCCGTAGCCCCAAGCCGGCGGCCGCGTCT
TCGCCGCCCGCAAGGGCCGCGGCGCCCATAGCCTCGACGTCGCCGCCGAAGCCTGCTGCG
GCGCAGAAGACGGCGACGCCCGTTAAGGGTCCTGCAGCGTCTGGACGCCGTTCGCCGGTG
GCTAGGCCGGCTGCTTCGGCGCGGAAGCAGCTGTCCCCCGTTAAGGAGAATCCCAACCGG
CGGCTTGTCATGGAGGAGGTCCGGATCTTGAAGCGCGGCGAGGAACCGCCCGCTCCAGCT
CCCGCGCCAGCCCCTACGCCGGTGATAGCAGCGCCCCCCGCGGCGCAAGCCGCGGCGGTT
GACCAGCGCGCCCTCTGCTCCACTGGTCGGATCGGGCCGCAGGCGCCCGCCGTGGTGCCG
ACGAAGAAGATGGTGTCGCCCCCCGCTGCATCTCCAGCCAACGCGACCGTGTTCGCGCGC
CGGGTGTTTTCTGCCTCGGTGCCCGCCGTAGTGCCGACGAAGAAGACGGTGGCGGTCCCC
GCTGCATCACCAGCCAAAGCCCCCGTGTACGCGGGCCTGGCGTTTTCTACCGCAGCGCCT
GAGCCCAGCTCCCTCCCCATGCCCTCCTTCTTACTCCTTCCCGCGGAGTCCGAGGCTACT
CGTGGCCTTCGGTGCCTCCTCCGCATCGGCGACCTCGCCTGA

Peptide Sequence

PEP ID

Zm00001d018388_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:5:219784860:219785621:1 gene:Zm00001d018388 transcript:Zm00001d018388_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Alginate regulatory protein AlgP

Sequence

MATAVLRSHDALNNRLHLDAYTPSPAKPRRRRSPKPAAASSPPARAAAPIASTSPPKPAA
AQKTATPVKGPAASGRRSPVARPAASARKQLSPVKENPNRRLVMEEVRILKRGEEPPAPA
PAPAPTPVIAAPPAAQAAAVDQRALCSTGRIGPQAPAVVPTKKMVSPPAASPANATVFAR
RVFSASVPAVVPTKKTVAVPAASPAKAPVYAGLAFSTAAPEPSSLPMPSFLLLPAESEAT
RGLRCLLRIGDLA

Transcript Sequence

Transcript ID

Zm00001d018388_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:5:219784860:219785621:1 gene:Zm00001d018388 gene_biotype:protein_coding transcript_biotype:protein_coding description:Alginate regulatory protein AlgP

Sequence

ATGGCCACGGCGGTTCTCAGATCCCACGATGCGCTCAACAACCGCCTGCATCTCGACGCG
TACACCCCGTCCCCGGCGAAGCCGCGCCGGCGCCGTAGCCCCAAGCCGGCGGCCGCGTCT
TCGCCGCCCGCAAGGGCCGCGGCGCCCATAGCCTCGACGTCGCCGCCGAAGCCTGCTGCG
GCGCAGAAGACGGCGACGCCCGTTAAGGGTCCTGCAGCGTCTGGACGCCGTTCGCCGGTG
GCTAGGCCGGCTGCTTCGGCGCGGAAGCAGCTGTCCCCCGTTAAGGAGAATCCCAACCGG
CGGCTTGTCATGGAGGAGGTCCGGATCTTGAAGCGCGGCGAGGAACCGCCCGCTCCAGCT
CCCGCGCCAGCCCCTACGCCGGTGATAGCAGCGCCCCCCGCGGCGCAAGCCGCGGCGGTT
GACCAGCGCGCCCTCTGCTCCACTGGTCGGATCGGGCCGCAGGCGCCCGCCGTGGTGCCG
ACGAAGAAGATGGTGTCGCCCCCCGCTGCATCTCCAGCCAACGCGACCGTGTTCGCGCGC
CGGGTGTTTTCTGCCTCGGTGCCCGCCGTAGTGCCGACGAAGAAGACGGTGGCGGTCCCC
GCTGCATCACCAGCCAAAGCCCCCGTGTACGCGGGCCTGGCGTTTTCTACCGCAGCGCCT
GAGCCCAGCTCCCTCCCCATGCCCTCCTTCTTACTCCTTCCCGCGGAGTCCGAGGCTACT
CGTGGCCTTCGGTGCCTCCTCCGCATCGGCGACCTCGCCTGA