Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d018367_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:5:219274877:219276542:-1 gene:Zm00001d018367 gene_biotype:protein_coding transcript_biotype:protein_coding description:Spermidine hydroxycinnamoyl transferase
Sequence	ATGGAGGTGGAGATCCTCGAGTCCTGCATGGTGAAACCCAGCGACGACATAGGGACGCCG CCGCCGCCCATGCACGTGGTCTGGCTCTCCAACCTCGATCTACTCGTGGCCAGGAGCCAC ACGCCCACCGTATACGTGTACCGGCCCAGCCCTGACCCGGACTTCTTCTCGCCGGGCGTC CTCAGTGCTGCCCTGTCCAAGGCGCTCGTCCGCTTCTACCCCCTCGCCGGCCGGCTCGCG CAGGACGGCGCCGGCCGCCCGCAGATCCACTGCACCGGAGAAGGCGCGCTCCTCGTCACC GCGCGCGCCGACGCTACCCTCCAGGACATCCCCGGCGGGTTCGCCCCGTCGGATGAGCTG CGGCAGATGCTTGTCCCCTCGGCTGCCGACGGCGAAGACCGCGCCGGCATCTTGGCCATG TTCCAGGTGACGTCCTTCAAGTGCGGCGGGGTGTGCGTGGGCGCGGCGATCCACCACACG GCGGCGGACGGCCTAGCGGCGCTCGACTTCGTCAACACGTGGGCCGCCATCGCGAGCAAG GGCGTCGACGAGGCCGCGCCGGCGCCGCGCCCGTGGCTGGACCGCACGCTGCTCCGCGCG CGCTCCCCTCCCGACGTGCGCTTCGACCACAGCGAGTACTCCCCGCGGGGCGGCGGCGGT CCAAAGACGGCGAGGGTCCCGTTCGACTCCGCCATCCTACCCATGTCCAAGACCCAGGTG GACGCGCTCAGGGCCGGCAAGAAGGTGTCCACGTTCAAGGCCGTGGTCGCCCACGTGTGG CGGTGCGCGTGCATAGCGCGCGGGCTCGCGGGAGACGAGGACACCCGTCTGTACATGACC GCCGACGCGCGCTCCCGCGTCCGCCCGCCGCTCCCGGAAGGCTACCTCGGCAACGCCATC TTCCGCGCGTCAGCGGTGGCCACGGCGGGCGACGTCGTCTCCGAGCAGCTCGACGCCGTT GCGGGTAGGGTGTCCGGCGCCACCGCCCGGCTGGACGACGAGTACGTCCGATCGCTGGTG GACTACCTGGAGCAGGTGGTGGGCGATGTGGCGGGGCTCCGCAAGGGGGAGTGGGTGATG CCGGAGACCGACCTGTGGGTGATAAGCTGGCAGGGGCTGCCCATCTACGACGCCGACTTC GGCTGGGGACGGCCGGCGTTCATGGGCCGCGCGTGCCTCCAGTTCAGCGGCCTCGTGTAC CTCGTCCCGGGCCCGGACGGCGACGGCCGCCTCGACGTCGTCGTGGCCATGGAGCCCAAG AGCCTGGCCAGATTCAAGGAGCTGTTGTACGAGCTCAAAGGTGCAGGTGTTCCGTGCACG GCAGACTGA

Peptide Sequence

PEP ID	Zm00001d018367_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:5:219274877:219276542:-1 gene:Zm00001d018367 transcript:Zm00001d018367_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Spermidine hydroxycinnamoyl transferase
Sequence	MEVEILESCMVKPSDDIGTPPPPMHVVWLSNLDLLVARSHTPTVYVYRPSPDPDFFSPGV LSAALSKALVRFYPLAGRLAQDGAGRPQIHCTGEGALLVTARADATLQDIPGGFAPSDEL RQMLVPSAADGEDRAGILAMFQVTSFKCGGVCVGAAIHHTAADGLAALDFVNTWAAIASK GVDEAAPAPRPWLDRTLLRARSPPDVRFDHSEYSPRGGGGPKTARVPFDSAILPMSKTQV DALRAGKKVSTFKAVVAHVWRCACIARGLAGDEDTRLYMTADARSRVRPPLPEGYLGNAI FRASAVATAGDVVSEQLDAVAGRVSGATARLDDEYVRSLVDYLEQVVGDVAGLRKGEWVM PETDLWVISWQGLPIYDADFGWGRPAFMGRACLQFSGLVYLVPGPDGDGRLDVVVAMEPK SLARFKELLYELKGAGVPCTAD

Transcript Sequence

Transcript ID	Zm00001d018367_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:219274877:219276542:-1 gene:Zm00001d018367 gene_biotype:protein_coding transcript_biotype:protein_coding description:Spermidine hydroxycinnamoyl transferase
Sequence	GGCAGTGTTGAGGCCAAGGCCACCGACCCACCTCTCTCATAGCACTAGCAGCAATGGAGG TGGAGATCCTCGAGTCCTGCATGGTGAAACCCAGCGACGACATAGGGACGCCGCCGCCGC CCATGCACGTGGTCTGGCTCTCCAACCTCGATCTACTCGTGGCCAGGAGCCACACGCCCA CCGTATACGTGTACCGGCCCAGCCCTGACCCGGACTTCTTCTCGCCGGGCGTCCTCAGTG CTGCCCTGTCCAAGGCGCTCGTCCGCTTCTACCCCCTCGCCGGCCGGCTCGCGCAGGACG GCGCCGGCCGCCCGCAGATCCACTGCACCGGAGAAGGCGCGCTCCTCGTCACCGCGCGCG CCGACGCTACCCTCCAGGACATCCCCGGCGGGTTCGCCCCGTCGGATGAGCTGCGGCAGA TGCTTGTCCCCTCGGCTGCCGACGGCGAAGACCGCGCCGGCATCTTGGCCATGTTCCAGG TGACGTCCTTCAAGTGCGGCGGGGTGTGCGTGGGCGCGGCGATCCACCACACGGCGGCGG ACGGCCTAGCGGCGCTCGACTTCGTCAACACGTGGGCCGCCATCGCGAGCAAGGGCGTCG ACGAGGCCGCGCCGGCGCCGCGCCCGTGGCTGGACCGCACGCTGCTCCGCGCGCGCTCCC CTCCCGACGTGCGCTTCGACCACAGCGAGTACTCCCCGCGGGGCGGCGGCGGTCCAAAGA CGGCGAGGGTCCCGTTCGACTCCGCCATCCTACCCATGTCCAAGACCCAGGTGGACGCGC TCAGGGCCGGCAAGAAGGTGTCCACGTTCAAGGCCGTGGTCGCCCACGTGTGGCGGTGCG CGTGCATAGCGCGCGGGCTCGCGGGAGACGAGGACACCCGTCTGTACATGACCGCCGACG CGCGCTCCCGCGTCCGCCCGCCGCTCCCGGAAGGCTACCTCGGCAACGCCATCTTCCGCG CGTCAGCGGTGGCCACGGCGGGCGACGTCGTCTCCGAGCAGCTCGACGCCGTTGCGGGTA GGGTGTCCGGCGCCACCGCCCGGCTGGACGACGAGTACGTCCGATCGCTGGTGGACTACC TGGAGCAGGTGGTGGGCGATGTGGCGGGGCTCCGCAAGGGGGAGTGGGTGATGCCGGAGA CCGACCTGTGGGTGATAAGCTGGCAGGGGCTGCCCATCTACGACGCCGACTTCGGCTGGG GACGGCCGGCGTTCATGGGCCGCGCGTGCCTCCAGTTCAGCGGCCTCGTGTACCTCGTCC CGGGCCCGGACGGCGACGGCCGCCTCGACGTCGTCGTGGCCATGGAGCCCAAGAGCCTGG CCAGATTCAAGGAGCTGTTGTACGAGCTCAAAGGTGCAGGTGTTCCGTGCACGGCAGACT GAGCTGCTGCATTCCGTGCAGGTTCCTTGGCTTGCTACCGGCTGGCAAAACGAAAACCTG TTTGACAAATTGTTCCTTGCATTGCCTATCTACTTCGACCTTTACTGCAGTACTCCTAGT TTTCTACTCGTTGTTTGTGATCGCAATCTGGTGAGTACTGTACTCTATATGCATTTACAT GGCTATCTATATTCGGAGCTAAA