Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d018362_T006
CDS Infomation	cds chromosome:B73_RefGen_v4:5:219168578:219177085:-1 gene:Zm00001d018362 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein TSS
Sequence	ATGACCATTTTTCCTTGTATCAGCTTAAGGATGCTGCTTCATAAGTCATGTGCTCAAGCA CCTGGAGTTCAACGGTTGCAGACTAGTGATCCTCAAGACAATGAGGCTACTCAAACTTTT GTCCGGAAGATATTAACAGACAGCCTGCAGAAGCTTGAAAATGAGGTTCCGATAGTAACA AGACCTATCAGATGGGAACTTGGTGCTTGTTGGGTACAACATCTACAGAACCCAACTTCC GAGAAGACAGAGACTAAGAAAAGTGACGAGACTAAGGATGTCCCTACAGTAAAGGGTCTG GGTAAACAATTTGGTCAGTTAAAGGAGATAAAAAAGAAGACAGATGACAAGGGTGGAAAA GGTACATATGTAAAAGGAAACAATTCACCTAATACAGATAATGGGCATACAGACAACACT GCCAGTGTAAAGGATGATAAGGACATTATTCTTCAGAGATTGCTTCCGGAAGCAGCTTTC CAAAGACTGAAGGAATCAGAAACTGGACTTCATGTTAAGTCACTGGATGAACTGATTGAG ATGTCACATAAATATTATGATGATACCGCGCTACCCAAATTGGTTGCAGACTTTGGCTCA CTTGAGCTTTCCCCTGTTGATGGAAGGACATTAACAGATTTTATGCACACTAGGGGCCTC CAGATGCGGTCACTGGGACGAGTGGTTGAGCTTTCGGATAAGCTTCCACATATACAGTCC TTGTGTATACATGAGATGGTAGTTCGAGCATTTAAGCACATAGTTCGGGCTGTTATTGCA GCTGTTGATGATATAAATGATATGGCAGACTCAGTTGCGTCATGTTTAAATATTTTGTTG GGACCATTTCTGGAGGAAAACAATGACAAAGATTGTGGTGAGGATCATAATCTCAGGAAA AGGTGGCTGGAGGTCTTTTTGATAAAGAGATTTGGTTGGAAGTGGAAAGATGAATATTGT CTTGATCTAAGAAAATATGCCATTCTCCGTGGTCTCTGCCATAAGGTAGGACTTGAGTTA ATAACAAAAGATTATGACATGGATATGCCAAACCCATTCAGAAAGTCGGATATTATCAGT GTTGTTCCTATCTACAAGCATGTTGCATGCTCATCAGCTGATGGCCGCACCCTGCTGGAG TCATCCAAGACTTTCCTGGATAAAGGGAAACTTGAGGATGCTGTTAGCTACGGCACAAAA GCTCTTGCAAAACTTGTTGCTGTTTGTGGTCCTTATCATAGAATGACGGCAGGAGCATAC AGCCTTCTTGCAGTAGTGCTTTATCATACTGGTGACTTCAACCAGGCAACCATCTATCAA CAGAAGGCTTTAGATATTAATGAGAGGGAACTTGGACTTGACCACCCAGATACAATGAAA AGCTATGGAGATCTTGCTGTTTTCTACTATCGCCTGCAACATACAGAACTAGCATTAAAG TATGTCAATCGTGCCCTATATCTTTTGCACCTTACATGTGGCCCTTCTCATCCTAACACC GCTGCAACTTATATCAATGTTGCGATGATGGAAGAAGGGTTGGGCAATGTCCATGTTGCA CTCCGTTACCTGCACGAAGCTCTAAAATGTAACCAACGGTTGCTTGGCGCTGATCACATA CAGACTGCGGCAAGTTATCATGCTATTGCTATTGCTTTGTCTTTAATGGAAGCGTACTCA TTGAGTGTCCAACATGAAAAGACCACGCTAAGGATACTTCAAGCAAAGCTTGGATCCGAG GATCTTCGGACCCAGGATGCTTCTGCTTGGCTGGAATACTTTGAATCCAAGGCACTAGAG CAGCAGGAAGCAGCACGAAATGGTACTCCAAAGCCTGATGCTTCAATAGCAAGCAGAGGA CATCTGAGTGTATCAGATCTTTTGGATTATATCAACCCGGATGATGAGCTCAAGGCTAAG GAAATGCAAAGGAAACAAGTCCGTGCTAAGATCAAAGGTCGCACTGGGCAAAACCAATCT GAACTTGTTGATGATGAAGATCAAAGGAGTCCTGCACCTAACAATGATAAAAATTTATTA ACCGAGAATGGAAACTCTGGAGTAAAAGAGAATGGAACCTTTGTTGAGCATGTGAAAGAT GAAATATCAAGTGACACTGCAATCCACATACCTCAAGATGGTTTTACTGAAGAGTGCACA TCTGATGAGGGGTGGCAAGCGGCTGTTCCAAAGGGGCGATCCACAGGGAGCCGCAGAACT GGTGCAGGCACGAGGAGGCCAAATCTGGCAAAAATTAATACTAGTTCACTAAACAGTGAG AATGGAAGATACAAAGGAAGAGGTATATCTAACTTCTCTTCCCCTCGAGTTTCACCTAGT GAGGCTGCAGTTTCTATTGGTTCTAGACCTCTTGCAAAGAAATTGGCTAAGAGTTCAAGC TTCAATTCCAAAGCAGTTAGCACTGCCGTCTCATCGAATACTGGTGAGAATTCTTTCAAT CTCAACTCCAAGCCAGCAAGCCCTGCCATTGCCACAGCTGCTGCCAAGGTGATACCATCC ACAACACCAAGTGCTAGTCAAACAGTAAGGAAGTCACTTTCATACAAGGAGGTAGCAATA GCTGCACCAGGGACTCTTGCCAAAGCATCGAGTGATGTACACACAGAAGAAAAAGATACA GGTGACCAAGGTGCAAGTCCTGAAAGTTCTAATTCTAAGTCTCCAAAAGAAATCAATGGT CACCCTTCTGGGGAGAAAGATGGGGCAATAGAAGTGTCGCCACAGGATGATACTTCACAG GTATCTAAATCACCTGATGGAGGTAAACCTGAGCAAACTGATGTTTTGATTGGTTCAAAT CAACCAGATACAGTACATAAAAAATCCTCAGATCCAGCAGAGACATCTGTAGCAAAGGAC ATAGATCTTCCGGCCCCGGTCATATCATCTGGAACACAAACTGAGGCTGACACCCCAAAT GATGAAGCACCAACTGCAATTGAGGCAAATGATTCTTCCTCCAATGACGATGAAAGAGAT TCAGGAGCAGATACACCAGAACAACTGTCTAGTGGAGGTGAAAATGAGAAATCTTCACTA TCTGAGAGTGAAAAGAATGATACACCAAGAGAAGGTGCTAAAGAGACAACAAGTAAACTT TCTGCTGCTGCGGCTCCATTCAATCCATCCAGCGTACCAGCTTTTGGTTCAATGGCTGTC CCAGGTTTCAGAGAACATGGAGGGCTATTGCCATCACCAGCCAATGTGCCCCCTATGCTG TCCATTCCTCTCCGCAAGCACCCTCACCAATCTGCAACTGCAAGGGTACCTTATGGTCCA CGTCTGGCTGGAGGCTACAATAGATCAGGGCACCGAGGACTTCGTAAGAAGCCTGTGTTG ACAAGTGGTGAAGCCCCTACAGAAACAAACACGTCTGGCCCCAGGATTATGAACCCTAAC GCCCCAGAGTTTGTTCCAGGTCAATCTCGGAGTCCTAATGGGCATCCAGCATCTCCAAAT GGTCCTTTAGCATCTCCAGGTGGTATTCCATCTTCACCACAGGACCTTCTATCCTCTCCA GATAGTACCTTGGAGTCACCAGTAACTGCATCCCCACAAGTTTCTGAATGTAGCCAGATT AGTCCTGAAGGAGATGTTGAGGGTGTGGGTGTAAAGCAGAACATGGATGACACGAACCAC CCAGAAAGTAAAGATGGTGAAGTGGAGCCTGAGCAAACCAAAGCTCCTGAAGGTACAGAA GAAGGCGCAGCGGTAAAAGATGCTGCTGAAGAGTTGATTGCAGCCGAGCAGCCCAAATCC TGGGCTGACTACAGCGATGGAGAGGTTGAGGTCGTTGAGGTTGCAAGCTAA

Peptide Sequence

PEP ID	Zm00001d018362_P006
PEP Infomation	pep chromosome:B73_RefGen_v4:5:219168578:219177085:-1 gene:Zm00001d018362 transcript:Zm00001d018362_T006 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein TSS
Sequence	MTIFPCISLRMLLHKSCAQAPGVQRLQTSDPQDNEATQTFVRKILTDSLQKLENEVPIVT RPIRWELGACWVQHLQNPTSEKTETKKSDETKDVPTVKGLGKQFGQLKEIKKKTDDKGGK GTYVKGNNSPNTDNGHTDNTASVKDDKDIILQRLLPEAAFQRLKESETGLHVKSLDELIE MSHKYYDDTALPKLVADFGSLELSPVDGRTLTDFMHTRGLQMRSLGRVVELSDKLPHIQS LCIHEMVVRAFKHIVRAVIAAVDDINDMADSVASCLNILLGPFLEENNDKDCGEDHNLRK RWLEVFLIKRFGWKWKDEYCLDLRKYAILRGLCHKVGLELITKDYDMDMPNPFRKSDIIS VVPIYKHVACSSADGRTLLESSKTFLDKGKLEDAVSYGTKALAKLVAVCGPYHRMTAGAY SLLAVVLYHTGDFNQATIYQQKALDINERELGLDHPDTMKSYGDLAVFYYRLQHTELALK YVNRALYLLHLTCGPSHPNTAATYINVAMMEEGLGNVHVALRYLHEALKCNQRLLGADHI QTAASYHAIAIALSLMEAYSLSVQHEKTTLRILQAKLGSEDLRTQDASAWLEYFESKALE QQEAARNGTPKPDASIASRGHLSVSDLLDYINPDDELKAKEMQRKQVRAKIKGRTGQNQS ELVDDEDQRSPAPNNDKNLLTENGNSGVKENGTFVEHVKDEISSDTAIHIPQDGFTEECT SDEGWQAAVPKGRSTGSRRTGAGTRRPNLAKINTSSLNSENGRYKGRGISNFSSPRVSPS EAAVSIGSRPLAKKLAKSSSFNSKAVSTAVSSNTGENSFNLNSKPASPAIATAAAKVIPS TTPSASQTVRKSLSYKEVAIAAPGTLAKASSDVHTEEKDTGDQGASPESSNSKSPKEING HPSGEKDGAIEVSPQDDTSQVSKSPDGGKPEQTDVLIGSNQPDTVHKKSSDPAETSVAKD IDLPAPVISSGTQTEADTPNDEAPTAIEANDSSSNDDERDSGADTPEQLSSGGENEKSSL SESEKNDTPREGAKETTSKLSAAAAPFNPSSVPAFGSMAVPGFREHGGLLPSPANVPPML SIPLRKHPHQSATARVPYGPRLAGGYNRSGHRGLRKKPVLTSGEAPTETNTSGPRIMNPN APEFVPGQSRSPNGHPASPNGPLASPGGIPSSPQDLLSSPDSTLESPVTASPQVSECSQI SPEGDVEGVGVKQNMDDTNHPESKDGEVEPEQTKAPEGTEEGAAVKDAAEELIAAEQPKS WADYSDGEVEVVEVAS

Transcript Sequence

Transcript ID	Zm00001d018362_T006
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:219168578:219177085:-1 gene:Zm00001d018362 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein TSS
Sequence	GCGAGCAGTCAGTCACTGACCCACACCCACCACCTCCTCGCCGTCCCGCGCAGAGGACTA CACGGAGGAGCTCGCCGTCGCGCACGTGCGTCGCCTGCTCGACATCGTCGCCTGCACCAC CGTGTTCGGGGCGAAGAAGCCCGAGCCGAAGCCCGATGCGGCGGATGCCGCGGCCGAGTC CGCCAAAGCCGGCTCGCCCTCGCCCGGTAAGACGGCGCCCGGCGGCGGCGAGGAGCCCAT GTACCCGCCGCCGAAGCTGGAGCAGTTCTACGATTTCTTCACCTTCTCGCACCTCACGCC GCCGCTGCACTACATTCGGAGGTCGTCCCGCCCATTCGTTGATGACAAGAGAGAAGACGA CTTCTTCCAGATCGATGTGCGAGTTTGTAACGGGAAACCCGTGACGATTGTGGCATCCCA AGAAGGATTCTACCCTGCAGGGAAGCGAGCACTCATCAGCCGCTCCCTCGTTGGACTGTT GCAGCAGACAAGCCGTGCATTTGATGGAGCCTACAAGGCTCTGATGAAGGCATTTGTCGA GCACAACAAGTTTGGAAATCTACCTTATGGGTTCCGATCAAACACATGGGTGGCTCCCCC TGTCGTTGCCGACTCACCATCAGTGTTCCCACCTCTCCCAACCGAAGATGAAACCTGGGG TGGCAGTGGTGGTGGTCAAGGAAGAGACGGAAAGCACGACCATAGACCATGGGTGAAAGA ATTTGCCATTCTTGCTGCAATGCCTTGCAAAACAGCTGAGGAGAGGCAAATCAGAGACAG AAAGGCTTTCCTACTCCACAGTTTGTTTGTGGATGTTGCAGTCCTCAAAGCTGTTGCATC TATCCAGCAACTGATTTCCAACCATACAAGTTTACATGAAACAGAGAATGGCACCATCGG TTCAGTTTTGCACACCGAGCAAGTAGGTGATATGAAAATAATGATCACAAAGGACAAAAC AGATGCAAGCTCCAAGCTAGATGTCAAATTGGATGGAAGTCAGGCTCCAGGGATGTCTTC TGATGAGCTTGCTCAGAGAAACTTGTTGAAAGGCATCACTGCTGATGAGAGTGCAACAGT ACATCATTTTATGAAGTATTGAAGTTATGCTATCCAATTACAGGATACAGCCACTCTTGG TGTGGTTATTGTAAAGCATTGTGGGTATACAGCTGTTGTCCAAGTTCCAGTAGATACTGA ACTGCCAGCTGCTTCTGTAGCACAGCAGGAGATCCACATTGAAGACCAGCCTGAAGGAGG TAGCAATGCTCTTAATGTCAACAGATGACCATTTTTCCTTGTATCAGCTTAAGGATGCTG CTTCATAAGTCATGTGCTCAAGCACCTGGAGTTCAACGGTTGCAGACTAGTGATCCTCAA GACAATGAGGCTACTCAAACTTTTGTCCGGAAGATATTAACAGACAGCCTGCAGAAGCTT GAAAATGAGGTTCCGATAGTAACAAGACCTATCAGATGGGAACTTGGTGCTTGTTGGGTA CAACATCTACAGAACCCAACTTCCGAGAAGACAGAGACTAAGAAAAGTGACGAGACTAAG GATGTCCCTACAGTAAAGGGTCTGGGTAAACAATTTGGTCAGTTAAAGGAGATAAAAAAG AAGACAGATGACAAGGGTGGAAAAGGTACATATGTAAAAGGAAACAATTCACCTAATACA GATAATGGGCATACAGACAACACTGCCAGTGTAAAGGATGATAAGGACATTATTCTTCAG AGATTGCTTCCGGAAGCAGCTTTCCAAAGACTGAAGGAATCAGAAACTGGACTTCATGTT AAGTCACTGGATGAACTGATTGAGATGTCACATAAATATTATGATGATACCGCGCTACCC AAATTGGTTGCAGACTTTGGCTCACTTGAGCTTTCCCCTGTTGATGGAAGGACATTAACA GATTTTATGCACACTAGGGGCCTCCAGATGCGGTCACTGGGACGAGTGGTTGAGCTTTCG GATAAGCTTCCACATATACAGTCCTTGTGTATACATGAGATGGTAGTTCGAGCATTTAAG CACATAGTTCGGGCTGTTATTGCAGCTGTTGATGATATAAATGATATGGCAGACTCAGTT GCGTCATGTTTAAATATTTTGTTGGGACCATTTCTGGAGGAAAACAATGACAAAGATTGT GGTGAGGATCATAATCTCAGGAAAAGGTGGCTGGAGGTCTTTTTGATAAAGAGATTTGGT TGGAAGTGGAAAGATGAATATTGTCTTGATCTAAGAAAATATGCCATTCTCCGTGGTCTC TGCCATAAGGTAGGACTTGAGTTAATAACAAAAGATTATGACATGGATATGCCAAACCCA TTCAGAAAGTCGGATATTATCAGTGTTGTTCCTATCTACAAGCATGTTGCATGCTCATCA GCTGATGGCCGCACCCTGCTGGAGTCATCCAAGACTTTCCTGGATAAAGGGAAACTTGAG GATGCTGTTAGCTACGGCACAAAAGCTCTTGCAAAACTTGTTGCTGTTTGTGGTCCTTAT CATAGAATGACGGCAGGAGCATACAGCCTTCTTGCAGTAGTGCTTTATCATACTGGTGAC TTCAACCAGGCAACCATCTATCAACAGAAGGCTTTAGATATTAATGAGAGGGAACTTGGA CTTGACCACCCAGATACAATGAAAAGCTATGGAGATCTTGCTGTTTTCTACTATCGCCTG CAACATACAGAACTAGCATTAAAGTATGTCAATCGTGCCCTATATCTTTTGCACCTTACA TGTGGCCCTTCTCATCCTAACACCGCTGCAACTTATATCAATGTTGCGATGATGGAAGAA GGGTTGGGCAATGTCCATGTTGCACTCCGTTACCTGCACGAAGCTCTAAAATGTAACCAA CGGTTGCTTGGCGCTGATCACATACAGACTGCGGCAAGTTATCATGCTATTGCTATTGCT TTGTCTTTAATGGAAGCGTACTCATTGAGTGTCCAACATGAAAAGACCACGCTAAGGATA CTTCAAGCAAAGCTTGGATCCGAGGATCTTCGGACCCAGGATGCTTCTGCTTGGCTGGAA TACTTTGAATCCAAGGCACTAGAGCAGCAGGAAGCAGCACGAAATGGTACTCCAAAGCCT GATGCTTCAATAGCAAGCAGAGGACATCTGAGTGTATCAGATCTTTTGGATTATATCAAC CCGGATGATGAGCTCAAGGCTAAGGAAATGCAAAGGAAACAAGTCCGTGCTAAGATCAAA GGTCGCACTGGGCAAAACCAATCTGAACTTGTTGATGATGAAGATCAAAGGAGTCCTGCA CCTAACAATGATAAAAATTTATTAACCGAGAATGGAAACTCTGGAGTAAAAGAGAATGGA ACCTTTGTTGAGCATGTGAAAGATGAAATATCAAGTGACACTGCAATCCACATACCTCAA GATGGTTTTACTGAAGAGTGCACATCTGATGAGGGGTGGCAAGCGGCTGTTCCAAAGGGG CGATCCACAGGGAGCCGCAGAACTGGTGCAGGCACGAGGAGGCCAAATCTGGCAAAAATT AATACTAGTTCACTAAACAGTGAGAATGGAAGATACAAAGGAAGAGGTATATCTAACTTC TCTTCCCCTCGAGTTTCACCTAGTGAGGCTGCAGTTTCTATTGGTTCTAGACCTCTTGCA AAGAAATTGGCTAAGAGTTCAAGCTTCAATTCCAAAGCAGTTAGCACTGCCGTCTCATCG AATACTGGTGAGAATTCTTTCAATCTCAACTCCAAGCCAGCAAGCCCTGCCATTGCCACA GCTGCTGCCAAGGTGATACCATCCACAACACCAAGTGCTAGTCAAACAGTAAGGAAGTCA CTTTCATACAAGGAGGTAGCAATAGCTGCACCAGGGACTCTTGCCAAAGCATCGAGTGAT GTACACACAGAAGAAAAAGATACAGGTGACCAAGGTGCAAGTCCTGAAAGTTCTAATTCT AAGTCTCCAAAAGAAATCAATGGTCACCCTTCTGGGGAGAAAGATGGGGCAATAGAAGTG TCGCCACAGGATGATACTTCACAGGTATCTAAATCACCTGATGGAGGTAAACCTGAGCAA ACTGATGTTTTGATTGGTTCAAATCAACCAGATACAGTACATAAAAAATCCTCAGATCCA GCAGAGACATCTGTAGCAAAGGACATAGATCTTCCGGCCCCGGTCATATCATCTGGAACA CAAACTGAGGCTGACACCCCAAATGATGAAGCACCAACTGCAATTGAGGCAAATGATTCT TCCTCCAATGACGATGAAAGAGATTCAGGAGCAGATACACCAGAACAACTGTCTAGTGGA GGTGAAAATGAGAAATCTTCACTATCTGAGAGTGAAAAGAATGATACACCAAGAGAAGGT GCTAAAGAGACAACAAGTAAACTTTCTGCTGCTGCGGCTCCATTCAATCCATCCAGCGTA CCAGCTTTTGGTTCAATGGCTGTCCCAGGTTTCAGAGAACATGGAGGGCTATTGCCATCA CCAGCCAATGTGCCCCCTATGCTGTCCATTCCTCTCCGCAAGCACCCTCACCAATCTGCA ACTGCAAGGGTACCTTATGGTCCACGTCTGGCTGGAGGCTACAATAGATCAGGGCACCGA GGACTTCGTAAGAAGCCTGTGTTGACAAGTGGTGAAGCCCCTACAGAAACAAACACGTCT GGCCCCAGGATTATGAACCCTAACGCCCCAGAGTTTGTTCCAGGTCAATCTCGGAGTCCT AATGGGCATCCAGCATCTCCAAATGGTCCTTTAGCATCTCCAGGTGGTATTCCATCTTCA CCACAGGACCTTCTATCCTCTCCAGATAGTACCTTGGAGTCACCAGTAACTGCATCCCCA CAAGTTTCTGAATGTAGCCAGATTAGTCCTGAAGGAGATGTTGAGGGTGTGGGTGTAAAG CAGAACATGGATGACACGAACCACCCAGAAAGTAAAGATGGTGAAGTGGAGCCTGAGCAA ACCAAAGCTCCTGAAGGTACAGAAGAAGGCGCAGCGGTAAAAGATGCTGCTGAAGAGTTG ATTGCAGCCGAGCAGCCCAAATCCTGGGCTGACTACAGCGATGGAGAGGTTGAGGTCGTT GAGGTTGCAAGCTAATGAAAATACGACCTTCTCAGATAGCCAACACAGAGTGGAATTTTT ATTTCTCGAACAGATGAGCATTTCTCCTTCTCAATAGATGGTGCATTTTTTTACAGTGCG GGCTTCTCCCGCTGTATTTTCTGCTAAAGAAAAGATGCTGCTTTTTTGGGGATAGACTGA ATTGCCTTCCAGTGGCATTCAATGACCTTTGGGACTTGAAATTTTGAAGACTTTCCAGAA TGTGTCAGCCTTTGGGATTTGGCATTTCTTCATCTATTTTTTTGCTGCGAAGAATTTTGG GGAATAAGAGCACCTCAAAGTATCAGCAGGGGAGATACGGCGTTAACATTTCATCATTTC CCCATCTTGCTCCTGATTTCCCCCCCTTGGTGAATGTACTGTCGACTTAACGTCTTTCAT AGTTATTTCTTTGTTACAATAAATAGACTTTTTGAACCATGTATAAAATATAAAGCAAGA GATTTTAT