Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d018342_T003
CDS Infomation	cds chromosome:B73_RefGen_v4:5:218888425:218892344:1 gene:Zm00001d018342 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:trehalose-6-phosphate synthase11 description: trehalose-6-phosphate synthase11
Sequence	ATGCCTTCGATCTCCTGCCACAATCTCCTCGACCTCGCCGCGGCCGACGACGTGCCCCTG CCGTCGCCCACGCCGCTCCGCCTCCCGCGCGTCATGTCCGTCGCGTCCCCGGCCTCGCCC ACCTCGCCGCCCGCGCCCGCCCCGCCGCGCCGCGTCATCGTCTCCCACCGCCTGCCGCTC CGCGCGTCGCCGGACCCGGCGGCGCCCTTCGGGTTCGCCTTCTCCGTCGACGCCGGCACC GTCGCGTACCAGCTCCGCTCGGGGCTGCCCGCCAACGCGCCCGTCCTCCACATCGGCACC CTCCCAGCCGCCGCGGCCGAAGCCGCCTCAGATGAGCTGTCCGACTACCTGCTAGCCAAT TTCTCGTGCCTGCCGGTGTACCTCCCTACCGACCTCCACCACCGCTTCTACCACGGATTC TGCAAGCACTACCTCTGGCCGCTCCTCCATTACCTCCTCCCGCTGACGCCGTCGTCGCTC GGCGGCCTGCCGTTCCAGCGGACTCTATACCACTCCTTCCTCTCGGCGAACAGGGCCTTC GCCGACCGCCTCACCGAGGTGCTGTGCCCCGACGAGGACCTCGTCTGGATCCACGACTAC CACCTCCTCGCGCTCCCGACCTTCCTCCGCAAGCGCTTCCCGCGAGCCAAGGTCGGATTC TTCCTCCACTCACCTTTCCCCTCGTCGGAGATCTTCCGCACCATCCCCGTGCGGGATGAC CTCGTCCGCGCCCTCCTCAACGCCGACCTCGTCGGCTTCCACACCTTCGACTACGCGCGG CACTTCCTGACCGCGTGCTCGCGGCTGCTCGGACTCGACTACCAGTCCAAGCGCGGCTAC ATCGGCATCGAGTACTACGGCCGCACCGTCACGGTCAAGATTCTCCCCGTCGGGATCGAC ATGGGCCAGCTCAGATCGGTGGTCTCGGCGCCGGAGACGGAGGATGCGGTGCGGCGGGTG ACCGAGGCGTACAAGGGGCGGCGCCTCATGGTCGGCGTCGACGACGTCGATCTGTTCAAG GGGATCGGGCTCAAGTTCCTGGCGATGGAGCAGCTGCTCGTGGAGCACCGGGAGCTCCGC GGCCACGCCGTGCTCGTGCAGATCGCCAACCCTGCGCGCAGCGAGGGGCGCGACGTGCAG GGCGTGCAGGACGAGGCCAGGGCCATCAGCGCCCGGGTCAATGCGCGCTTCGGCACCCCC GGGTACACGCCGATCGTGCTCATCGACGCCCCGGTGACGCCGCAGGAGAAGGCTGCCTAC TACGCGGCTGCCGAGTGCTGCGTCGTCAGCGCCGTCCGCGACGGGCTCAACCGGATCCCC TACATCTACACGGTGTGCCGGCAGGAGAGCACCGCGCTCGGAGACGACTCGCCCAAGCGG AGCGTCATCGTGCTCTCGGAGTTCGTCGGTTGCTCCCCGTCCCTGAGCGGCGCGATCCGC GTCAACCCGTGGAGCGTGGAGTCCGTGGCGGAGGCCATGAACGCCGCGCTGCGGATGCCG GAGGCCGAGCAGCGGCTGCGGCACGAGAAGCACTACAAGTACGTGAGCACCCACGACGTC GCCTACTGGGCGCGGTCCTTCGACTCGGACCTGCAGCGCGCCTGCAAGGACCATTTCTCG CGCCGGCATTGGGGGATCGGCTTCGGCATGAGTTTCAAGGTGGTGGCCCTTGGCCCGAAT TTCCGGCGCCTCTCCGTGGAGCACATTGTCCCGTCGTATCGGAGGACGGATAACCGGCTG ATTCTCCTGGACTACGACGGCACCGTGATGCCGGAGAACTCCATCGACAGGACGCCGAGC AGTGAGGTCATTTCTGTGTTGAATCGTCTGTGCGAGGACCCCAAGAACAGAGTGTTCATC GTAAGCGGACGGGGGAAGGACGAGCTGAGCAGGTGGTTCGCCCCCTGCGAGAAGCTGGGC ATCGCCGCGGAGCACGGTTACCTCACAAGGTGGAGCAGGGACGCGCCATGGGATACCTCC GGGTTGGCCGCCGACTTCGACTGGAAGAAGACCGCGGAGCCGGGCATCAGCAAAGGCGTG GTAGTGGACAGCCTCCTGTCGTCGATGGTGAGGACGGGGAAGCCGCCGGACTTCGTGCTG TGCATCGGCGACGACCGGTCGGACGAGGACATGTTCGAGAGCATCGTGTGCCCGGCCTCC AACAGCGGCGTGAAGCTGCCGGCCAGCAGCGAGGTGTTCGCGTGCACGGTGGGCAAGAAG CCGAGCATGGCCAGGTACTACCTGGACGACACGGTGGACGTGGTCAAGATGCTGGACGGC CTGGCCAGCGCGCCGTCGCAGCAGCGGTCCAGGCCGGCGGTGCAGCTGCGGGTCTCGTTC GAAGGCTCGCTCTGA

Peptide Sequence

PEP ID	Zm00001d018342_P003
PEP Infomation	pep chromosome:B73_RefGen_v4:5:218888425:218892344:1 gene:Zm00001d018342 transcript:Zm00001d018342_T003 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:trehalose-6-phosphate synthase11 description: trehalose-6-phosphate synthase11
Sequence	MPSISCHNLLDLAAADDVPLPSPTPLRLPRVMSVASPASPTSPPAPAPPRRVIVSHRLPL RASPDPAAPFGFAFSVDAGTVAYQLRSGLPANAPVLHIGTLPAAAAEAASDELSDYLLAN FSCLPVYLPTDLHHRFYHGFCKHYLWPLLHYLLPLTPSSLGGLPFQRTLYHSFLSANRAF ADRLTEVLCPDEDLVWIHDYHLLALPTFLRKRFPRAKVGFFLHSPFPSSEIFRTIPVRDD LVRALLNADLVGFHTFDYARHFLTACSRLLGLDYQSKRGYIGIEYYGRTVTVKILPVGID MGQLRSVVSAPETEDAVRRVTEAYKGRRLMVGVDDVDLFKGIGLKFLAMEQLLVEHRELR GHAVLVQIANPARSEGRDVQGVQDEARAISARVNARFGTPGYTPIVLIDAPVTPQEKAAY YAAAECCVVSAVRDGLNRIPYIYTVCRQESTALGDDSPKRSVIVLSEFVGCSPSLSGAIR VNPWSVESVAEAMNAALRMPEAEQRLRHEKHYKYVSTHDVAYWARSFDSDLQRACKDHFS RRHWGIGFGMSFKVVALGPNFRRLSVEHIVPSYRRTDNRLILLDYDGTVMPENSIDRTPS SEVISVLNRLCEDPKNRVFIVSGRGKDELSRWFAPCEKLGIAAEHGYLTRWSRDAPWDTS GLAADFDWKKTAEPGISKGVVVDSLLSSMVRTGKPPDFVLCIGDDRSDEDMFESIVCPAS NSGVKLPASSEVFACTVGKKPSMARYYLDDTVDVVKMLDGLASAPSQQRSRPAVQLRVSF EGSL

Transcript Sequence

Transcript ID	Zm00001d018342_T003
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:218888425:218892344:1 gene:Zm00001d018342 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:trehalose-6-phosphate synthase11 description: trehalose-6-phosphate synthase11
Sequence	ACAGGCACACGCATATCCAGGCTTGCCATATTTATACCACCACCTCACCTCCCTCACGCG CCCGAGACACACCTCGGCCGTTCTTATCCCCAGAAGCTTCCGATCGTCTCCCACACCCGA CCGCCTGCCAAACCCGACACACTCGTCGCGGCGCGGCGCTTCTCTCCTCTCCTCTTCATG CGCCATCGCCGCCGCCTCCACCTCTGCGACGCCCACAGATAGGCAGGAGGAGGAGGGGGC GATGCCTTCGATCTCCTGCCACAATCTCCTCGACCTCGCCGCGGCCGACGACGTGCCCCT GCCGTCGCCCACGCCGCTCCGCCTCCCGCGCGTCATGTCCGTCGCGTCCCCGGCCTCGCC CACCTCGCCGCCCGCGCCCGCCCCGCCGCGCCGCGTCATCGTCTCCCACCGCCTGCCGCT CCGCGCGTCGCCGGACCCGGCGGCGCCCTTCGGGTTCGCCTTCTCCGTCGACGCCGGCAC CGTCGCGTACCAGCTCCGCTCGGGGCTGCCCGCCAACGCGCCCGTCCTCCACATCGGCAC CCTCCCAGCCGCCGCGGCCGAAGCCGCCTCAGATGAGCTGTCCGACTACCTGCTAGCCAA TTTCTCGTGCCTGCCGGTGTACCTCCCTACCGACCTCCACCACCGCTTCTACCACGGATT CTGCAAGCACTACCTCTGGCCGCTCCTCCATTACCTCCTCCCGCTGACGCCGTCGTCGCT CGGCGGCCTGCCGTTCCAGCGGACTCTATACCACTCCTTCCTCTCGGCGAACAGGGCCTT CGCCGACCGCCTCACCGAGGTGCTGTGCCCCGACGAGGACCTCGTCTGGATCCACGACTA CCACCTCCTCGCGCTCCCGACCTTCCTCCGCAAGCGCTTCCCGCGAGCCAAGGTCGGATT CTTCCTCCACTCACCTTTCCCCTCGTCGGAGATCTTCCGCACCATCCCCGTGCGGGATGA CCTCGTCCGCGCCCTCCTCAACGCCGACCTCGTCGGCTTCCACACCTTCGACTACGCGCG GCACTTCCTGACCGCGTGCTCGCGGCTGCTCGGACTCGACTACCAGTCCAAGCGCGGCTA CATCGGCATCGAGTACTACGGCCGCACCGTCACGGTCAAGATTCTCCCCGTCGGGATCGA CATGGGCCAGCTCAGATCGGTGGTCTCGGCGCCGGAGACGGAGGATGCGGTGCGGCGGGT GACCGAGGCGTACAAGGGGCGGCGCCTCATGGTCGGCGTCGACGACGTCGATCTGTTCAA GGGGATCGGGCTCAAGTTCCTGGCGATGGAGCAGCTGCTCGTGGAGCACCGGGAGCTCCG CGGCCACGCCGTGCTCGTGCAGATCGCCAACCCTGCGCGCAGCGAGGGGCGCGACGTGCA GGGCGTGCAGGACGAGGCCAGGGCCATCAGCGCCCGGGTCAATGCGCGCTTCGGCACCCC CGGGTACACGCCGATCGTGCTCATCGACGCCCCGGTGACGCCGCAGGAGAAGGCTGCCTA CTACGCGGCTGCCGAGTGCTGCGTCGTCAGCGCCGTCCGCGACGGGCTCAACCGGATCCC CTACATCTACACGGTGTGCCGGCAGGAGAGCACCGCGCTCGGAGACGACTCGCCCAAGCG GAGCGTCATCGTGCTCTCGGAGTTCGTCGGTTGCTCCCCGTCCCTGAGCGGCGCGATCCG CGTCAACCCGTGGAGCGTGGAGTCCGTGGCGGAGGCCATGAACGCCGCGCTGCGGATGCC GGAGGCCGAGCAGCGGCTGCGGCACGAGAAGCACTACAAGTACGTGAGCACCCACGACGT CGCCTACTGGGCGCGGTCCTTCGACTCGGACCTGCAGCGCGCCTGCAAGGACCATTTCTC GCGCCGGCATTGGGGGATCGGCTTCGGCATGAGTTTCAAGGTGGTGGCCCTTGGCCCGAA TTTCCGGCGCCTCTCCGTGGAGCACATTGTCCCGTCGTATCGGAGGACGGATAACCGGCT GATTCTCCTGGACTACGACGGCACCGTGATGCCGGAGAACTCCATCGACAGGACGCCGAG CAGTGAGGTCATTTCTGTGTTGAATCGTCTGTGCGAGGACCCCAAGAACAGAGTGTTCAT CGTAAGCGGACGGGGGAAGGACGAGCTGAGCAGGTGGTTCGCCCCCTGCGAGAAGCTGGG CATCGCCGCGGAGCACGGTTACCTCACAAGGTGGAGCAGGGACGCGCCATGGGATACCTC CGGGTTGGCCGCCGACTTCGACTGGAAGAAGACCGCGGAGCCGGGCATCAGCAAAGGCGT GGTAGTGGACAGCCTCCTGTCGTCGATGGTGAGGACGGGGAAGCCGCCGGACTTCGTGCT GTGCATCGGCGACGACCGGTCGGACGAGGACATGTTCGAGAGCATCGTGTGCCCGGCCTC CAACAGCGGCGTGAAGCTGCCGGCCAGCAGCGAGGTGTTCGCGTGCACGGTGGGCAAGAA GCCGAGCATGGCCAGGTACTACCTGGACGACACGGTGGACGTGGTCAAGATGCTGGACGG CCTGGCCAGCGCGCCGTCGCAGCAGCGGTCCAGGCCGGCGGTGCAGCTGCGGGTCTCGTT CGAAGGCTCGCTCTGAGGGGGAAGAGGAGAACACACAGCGCTAGTAGCAGCAGTAAACAG CAAACATCGAGCAAGGATAACCAGTGGTGATGAACACAACGAGATTCAGCAGACGGCGTG GTGTAGGATTGATTAGCTGCAGTTTACAGGATCGACAATTTTTTTTTGCTTTCTTCTACA TTGCTACCCCCAAATCTTTCGTGCCTGTATATGCCCGCATGGTAATATGCAAAGAATAAC GTTTCGACCACCAACCAAACCACCATTGTACATGTAGTTGACGATGACGACGAGATCAGA AAAGGAGAAGTGGGGAAAA