Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d018305_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:5:218213866:218216075:-1 gene:Zm00001d018305 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:AP2-EREBP-transcription factor 90 description:Ethylene-responsive transcription factor RAP2-3
Sequence

ATGTGCGGCGGCGCGATCCTTGCCAACCTTCGCGAGCCGGCGCCGCGCCGGCTCACAGAG
CGGGACATCTGGCAGCAGAAAAAGAAGCTCAAGAGGGGCGGCGGCGGCGGGAGGCGCTCG
TTCGCGGCGGAGGACGATGAGGACTTCGAGGCCGACTTTGAGGTCTTCGAGGCCGACTCC
AGTGATTCAGATTTGGAGCTCAGGGAGGGGACTGACGACGACGTCGTCGAGATCAAGCCC
TTCACTGCCAAGAGGACTTTCTCCAGCGCAGTTGGTCAGAAGCACCGTTCTGGCTCAGCT
TCTGCTAAAGCATCCAAGTCAAGTTTTGGACAGAAGCCTATCGTCAAAGTAGCTATGAAC
AACCTTGCCAACACAAATGCATCCTTCTTCCAATCTGCTAGCTACCCCTCCAATTTATTT
GTTCAGCATGGCAATATGCCATTTGTTCCAGCAATGAACTCTACTGCTTCTGTTGATGAT
CTTATCATGAATCTGCACTCTGACCAGGGAAGTAACTCCTTTGGCTGCTCAGACTTGGGC
TGGGAGAATGATACCAAGACACCAGACATCACTTCCATTGCTCCCATTTCCACTATTGCG
GAAGGCGACGAGTCTGCATTTGTCGACAGCAATTCAAACAGCTCATTTGTGCTTCCTGCC
CTGGAGAACAGTGCTGTTGATCTCACTGATGGGCTGACAGATTTAGAATCCTATATGAGG
TTTCTTCTGGATGGTGGTCCAAGTGATTCAGTTGATAGCCTTCTGAACCTTGATGGATCG
CAGGATGTTGGTAGCGACATGGACCTCTGGAGCTTCGACGACATGCCCATCGTCGGCGAT
TTCTTTTGA

Peptide Sequence

PEP ID

Zm00001d018305_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:5:218213866:218216075:-1 gene:Zm00001d018305 transcript:Zm00001d018305_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:AP2-EREBP-transcription factor 90 description:Ethylene-responsive transcription factor RAP2-3
Sequence

MCGGAILANLREPAPRRLTERDIWQQKKKLKRGGGGGRRSFAAEDDEDFEADFEVFEADS
SDSDLELREGTDDDVVEIKPFTAKRTFSSAVGQKHRSGSASAKASKSSFGQKPIVKVAMN
NLANTNASFFQSASYPSNLFVQHGNMPFVPAMNSTASVDDLIMNLHSDQGSNSFGCSDLG
WENDTKTPDITSIAPISTIAEGDESAFVDSNSNSSFVLPALENSAVDLTDGLTDLESYMR
FLLDGGPSDSVDSLLNLDGSQDVGSDMDLWSFDDMPIVGDFF

Transcript Sequence

Transcript ID

Zm00001d018305_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:5:218213866:218216075:-1 gene:Zm00001d018305 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:AP2-EREBP-transcription factor 90 description:Ethylene-responsive transcription factor RAP2-3
Sequence

GCTCTCCAAAGTTTCGTCCACCATTTCGCTCCCGCAAGCACCGATTTGTTTACTGCTCTC
TCCGACGCGCGGCGGCGGAGCTCCCTACGACGACTGAACCATGTGCGGCGGCGCGATCCT
TGCCAACCTTCGCGAGCCGGCGCCGCGCCGGCTCACAGAGCGGGACATCTGGCAGCAGAA
AAAGAAGCTCAAGAGGGGCGGCGGCGGCGGGAGGCGCTCGTTCGCGGCGGAGGACGATGA
GGACTTCGAGGCCGACTTTGAGGTCTTCGAGGCCGACTCCAGTGATTCAGATTTGGAGCT
CAGGGAGGGGACTGACGACGACGTCGTCGAGATCAAGCCCTTCACTGCCAAGAGGACTTT
CTCCAGCGCAGTTGGTCAGAAGCACCGTTCTGGCTCAGCTTCTGCTAAAGCATCCAAGTC
AAGTTTTGGACAGAAGCCTATCGTCAAAGTAGCTATGAACAACCTTGCCAACACAAATGC
ATCCTTCTTCCAATCTGCTAGCTACCCCTCCAATTTATTTGTTCAGCATGGCAATATGCC
ATTTGTTCCAGCAATGAACTCTACTGCTTCTGTTGATGATCTTATCATGAATCTGCACTC
TGACCAGGGAAGTAACTCCTTTGGCTGCTCAGACTTGGGCTGGGAGAATGATACCAAGAC
ACCAGACATCACTTCCATTGCTCCCATTTCCACTATTGCGGAAGGCGACGAGTCTGCATT
TGTCGACAGCAATTCAAACAGCTCATTTGTGCTTCCTGCCCTGGAGAACAGTGCTGTTGA
TCTCACTGATGGGCTGACAGATTTAGAATCCTATATGAGGTTTCTTCTGGATGGTGGTCC
AAGTGATTCAGTTGATAGCCTTCTGAACCTTGATGGATCGCAGGATGTTGGTAGCGACAT
GGACCTCTGGAGCTTCGACGACATGCCCATCGTCGGCGATTTCTTTTGA