Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d018281_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:5:217840006:217842369:1 gene:Zm00001d018281 gene_biotype:protein_coding transcript_biotype:protein_coding description:Subtilisin-like protease SBT1.4
Sequence	ATGGCTGGGCTAGCCGGCGTGGTGTGCCTCTGCCTCCTCCTCGCTGCCAGCTCTGTCACC GCCGCGGCGGCGGCAGCGGCCGAGGAGGAGTCCCTGTCCTCCTACATCGTGCACGTCGCG GCGGAGCACGCGCCACGGTCGACACGCCCGCGCTTGCTCTCCCGCTCATACACCTCTTTC CTGCACGACAGCCTGCCGGCGCACCTGCTGCGCCCGGCGCCGCTGGTGTTCTACGGGTAC GCGCACGCCGCGACTGGCTTCGCGGCGCGGCTCACGGAGCGCCAGGCCGCGCACCTCGCG TCCCAGCACTCCGTCCTCGCCGTCGTCCCCGACGAGACGCTGCAGCCGCACACCACGCTG ACGCCGTCCTTCCTCGGCCTCTCCCCGTCGTCGGGGCTCCTCCCGAGGTCCAACGGCGCC GCGGACGTCGTCATTGGCGTCATCGACAGCGGCATCTACCCCATGGACCGCCCGTCCTTC GCCGCAGACGCGTCGCTGCCGCCACCGCCAAGCAAGTTCCGGGGCACCTGCGTCTCCACG CCGTCTTTCAACGGCTCCGCGTACTGCAACAACAAGCTCGTCGGCGCCAGGTTCTTCTAC CAGGGCATGCAGCAGCGCATGGGCGTGGCCGCCTTTAGTGAGGCGGGGGAGTCCTTGTCG CCGCTGGACACCCAAGGCCACGGCTCGCACACCGCCTCTACCGCTGCCGGCTCGGCCGGG GTGGACGCTTCCTTCTTCAACTACGCCAAGGGCAAGGCCATCGGCGTGGCCCCGGGCGCG CGCATTGCCGCCTACAAGGCATGCTGGAAACACGGGTGCTCTGACTCCGACATCCTCATG GCGTTTGAGGCGGCCATCACTGACAGGGTCGATGTCATCTCCGTCTCGCTCGGCGCCTCA AAGCCCAAGCCAAGAAAGTTCTACAAAGATGGCATTGCCGTCGGTTCGTTCAGAGCCGTG CGCAACGGCATCACCGTCTCTGTATCTTCGGGAAACTTCGGCCCAGGAGAGTTCACCACC GTCAACGTCGCGCCCTGGTTCTTGACGGTTGGCGCGTCAACCATAAACCGCAGGTTCCCA GCGAGCGTCGTCCTCGGCAACGGCGAGACATCCACCGGCACTTCGATCTACGCCGGCGCG CCGCTTGGCAAAGCCAAGATACCGCTAGTATACGGCAAGGACGTGGGCTCGCAAGTCTGC GAAGCCGGCAAGCTCAATGCTAGCATGGTCGCCGGGAAGATTGTGGTGTGCGACCCCGGC GTGAATGGCCGAGCAGCGAAAGGCGAGGCCGTCAAACAAGCAGGTGGCGCCGGAGCAATC CTCGTGAGCGACGAAAGCTTCGGCGAGCAGGCCCTGACTACCGCTCACATCCTCCCTGCA ACAGCCGTCAAGTTTGCCGACGCCGAGAGCATCAAGAAGTACATAAGATCGAATGCGTCA CCCCCTGTCGCGACGATCGAGTTCCATGGCACCGTCGTCGGCCGGACGCCTTCGTCACCG AGAATGGCGTCGTTCTCGAGCAGGGGCCCAAACCTCCTTGCGCCCGAGATCCTCAAGCCG GACGTGACTGCCCCTGGTGTCGACATCCTAGCCGCGTGGACCGGCGAGAACTCGCCGTCG CAGCTCGGCAGCGACCCGAGGCGGGTGAAGTACAACATCATCTCCGGCACGTCCATGTCG TGCCCGCACGTGAGCGGCATCGCCGCGCTGCTCCGGCAGGCGCGGCCGGACTGGAGCCCC GCCGCGGTCAAGTCCGCCATGATGACCACCGCGTACAACGTCGACAACGCCGGGGACATC ATCAAGGACATGTCCACCGGCAAGGCGTCGACGCCGTTCGTGCGCGGGGCCGGACACGTG GACCCGGACCGCGCGGTCGACCCGGGCCTCGTGTACGACGCCGGCGCCGACGAGTACCTC TCCTTCCTGTGCGCGATCGGTTACACCGCCGAGCAGATCGCCGTGTTCAGGACGAAAGAC GACCCCGCGGTCGACTGTTCGAAGCGCAAGGCCTCCGTCGGCGACCACAACTACCCTGCC TTCTCTGTGGTACTCAACTCCACCAGGGACGCCGTCACGCAGCGCCGCGTCGTGCGCAAC GTCGGGAGCAGCGCCAGGGCCACGTACTGGGCCAGCGTCACCAGCCCGGCCGGCGTGCGC GTGACGGTGAACCCACGGAAGCTACGGTTCAGCGCGACGCAGAAGACGCAGGCGTACGAG ATCACTTTCACGTCGCGACGCATGTGGAGCGTGCCCGACAAGTACACGTTCGGGTCCATC GTGTGGAGCGACGGCGAGCATAAGGTGACTAGCCCCATCGCCATCACCTGGCCAGCGACA GCGAGCCAAGTGGCGGCGATGTGA

Peptide Sequence

PEP ID	Zm00001d018281_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:5:217840006:217842369:1 gene:Zm00001d018281 transcript:Zm00001d018281_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Subtilisin-like protease SBT1.4
Sequence	MAGLAGVVCLCLLLAASSVTAAAAAAAEEESLSSYIVHVAAEHAPRSTRPRLLSRSYTSF LHDSLPAHLLRPAPLVFYGYAHAATGFAARLTERQAAHLASQHSVLAVVPDETLQPHTTL TPSFLGLSPSSGLLPRSNGAADVVIGVIDSGIYPMDRPSFAADASLPPPPSKFRGTCVST PSFNGSAYCNNKLVGARFFYQGMQQRMGVAAFSEAGESLSPLDTQGHGSHTASTAAGSAG VDASFFNYAKGKAIGVAPGARIAAYKACWKHGCSDSDILMAFEAAITDRVDVISVSLGAS KPKPRKFYKDGIAVGSFRAVRNGITVSVSSGNFGPGEFTTVNVAPWFLTVGASTINRRFP ASVVLGNGETSTGTSIYAGAPLGKAKIPLVYGKDVGSQVCEAGKLNASMVAGKIVVCDPG VNGRAAKGEAVKQAGGAGAILVSDESFGEQALTTAHILPATAVKFADAESIKKYIRSNAS PPVATIEFHGTVVGRTPSSPRMASFSSRGPNLLAPEILKPDVTAPGVDILAAWTGENSPS QLGSDPRRVKYNIISGTSMSCPHVSGIAALLRQARPDWSPAAVKSAMMTTAYNVDNAGDI IKDMSTGKASTPFVRGAGHVDPDRAVDPGLVYDAGADEYLSFLCAIGYTAEQIAVFRTKD DPAVDCSKRKASVGDHNYPAFSVVLNSTRDAVTQRRVVRNVGSSARATYWASVTSPAGVR VTVNPRKLRFSATQKTQAYEITFTSRRMWSVPDKYTFGSIVWSDGEHKVTSPIAITWPAT ASQVAAM

Transcript Sequence

Transcript ID	Zm00001d018281_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:217840006:217842369:1 gene:Zm00001d018281 gene_biotype:protein_coding transcript_biotype:protein_coding description:Subtilisin-like protease SBT1.4
Sequence	ATGGCTGGGCTAGCCGGCGTGGTGTGCCTCTGCCTCCTCCTCGCTGCCAGCTCTGTCACC GCCGCGGCGGCGGCAGCGGCCGAGGAGGAGTCCCTGTCCTCCTACATCGTGCACGTCGCG GCGGAGCACGCGCCACGGTCGACACGCCCGCGCTTGCTCTCCCGCTCATACACCTCTTTC CTGCACGACAGCCTGCCGGCGCACCTGCTGCGCCCGGCGCCGCTGGTGTTCTACGGGTAC GCGCACGCCGCGACTGGCTTCGCGGCGCGGCTCACGGAGCGCCAGGCCGCGCACCTCGCG TCCCAGCACTCCGTCCTCGCCGTCGTCCCCGACGAGACGCTGCAGCCGCACACCACGCTG ACGCCGTCCTTCCTCGGCCTCTCCCCGTCGTCGGGGCTCCTCCCGAGGTCCAACGGCGCC GCGGACGTCGTCATTGGCGTCATCGACAGCGGCATCTACCCCATGGACCGCCCGTCCTTC GCCGCAGACGCGTCGCTGCCGCCACCGCCAAGCAAGTTCCGGGGCACCTGCGTCTCCACG CCGTCTTTCAACGGCTCCGCGTACTGCAACAACAAGCTCGTCGGCGCCAGGTTCTTCTAC CAGGGCATGCAGCAGCGCATGGGCGTGGCCGCCTTTAGTGAGGCGGGGGAGTCCTTGTCG CCGCTGGACACCCAAGGCCACGGCTCGCACACCGCCTCTACCGCTGCCGGCTCGGCCGGG GTGGACGCTTCCTTCTTCAACTACGCCAAGGGCAAGGCCATCGGCGTGGCCCCGGGCGCG CGCATTGCCGCCTACAAGGCATGCTGGAAACACGGGTGCTCTGACTCCGACATCCTCATG GCGTTTGAGGCGGCCATCACTGACAGGGTCGATGTCATCTCCGTCTCGCTCGGCGCCTCA AAGCCCAAGCCAAGAAAGTTCTACAAAGATGGCATTGCCGTCGGTTCGTTCAGAGCCGTG CGCAACGGCATCACCGTCTCTGTATCTTCGGGAAACTTCGGCCCAGGAGAGTTCACCACC GTCAACGTCGCGCCCTGGTTCTTGACGGTTGGCGCGTCAACCATAAACCGCAGGTTCCCA GCGAGCGTCGTCCTCGGCAACGGCGAGACATCCACCGGCACTTCGATCTACGCCGGCGCG CCGCTTGGCAAAGCCAAGATACCGCTAGTATACGGCAAGGACGTGGGCTCGCAAGTCTGC GAAGCCGGCAAGCTCAATGCTAGCATGGTCGCCGGGAAGATTGTGGTGTGCGACCCCGGC GTGAATGGCCGAGCAGCGAAAGGCGAGGCCGTCAAACAAGCAGGTGGCGCCGGAGCAATC CTCGTGAGCGACGAAAGCTTCGGCGAGCAGGCCCTGACTACCGCTCACATCCTCCCTGCA ACAGCCGTCAAGTTTGCCGACGCCGAGAGCATCAAGAAGTACATAAGATCGAATGCGTCA CCCCCTGTCGCGACGATCGAGTTCCATGGCACCGTCGTCGGCCGGACGCCTTCGTCACCG AGAATGGCGTCGTTCTCGAGCAGGGGCCCAAACCTCCTTGCGCCCGAGATCCTCAAGCCG GACGTGACTGCCCCTGGTGTCGACATCCTAGCCGCGTGGACCGGCGAGAACTCGCCGTCG CAGCTCGGCAGCGACCCGAGGCGGGTGAAGTACAACATCATCTCCGGCACGTCCATGTCG TGCCCGCACGTGAGCGGCATCGCCGCGCTGCTCCGGCAGGCGCGGCCGGACTGGAGCCCC GCCGCGGTCAAGTCCGCCATGATGACCACCGCGTACAACGTCGACAACGCCGGGGACATC ATCAAGGACATGTCCACCGGCAAGGCGTCGACGCCGTTCGTGCGCGGGGCCGGACACGTG GACCCGGACCGCGCGGTCGACCCGGGCCTCGTGTACGACGCCGGCGCCGACGAGTACCTC TCCTTCCTGTGCGCGATCGGTTACACCGCCGAGCAGATCGCCGTGTTCAGGACGAAAGAC GACCCCGCGGTCGACTGTTCGAAGCGCAAGGCCTCCGTCGGCGACCACAACTACCCTGCC TTCTCTGTGGTACTCAACTCCACCAGGGACGCCGTCACGCAGCGCCGCGTCGTGCGCAAC GTCGGGAGCAGCGCCAGGGCCACGTACTGGGCCAGCGTCACCAGCCCGGCCGGCGTGCGC GTGACGGTGAACCCACGGAAGCTACGGTTCAGCGCGACGCAGAAGACGCAGGCGTACGAG ATCACTTTCACGTCGCGACGCATGTGGAGCGTGCCCGACAAGTACACGTTCGGGTCCATC GTGTGGAGCGACGGCGAGCATAAGGTGACTAGCCCCATCGCCATCACCTGGCCAGCGACA GCGAGCCAAGTGGCGGCGATGTGA