Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d018274_T016
CDS Infomation

cds chromosome:B73_RefGen_v4:5:217743843:217763194:1 gene:Zm00001d018274 gene_biotype:protein_coding transcript_biotype:protein_coding description:Isoleucine--tRNA ligase chloroplastic/mitochondrial
Sequence

ATGGAAGCCGCCTCATGCTGCCGCGTCTTCTCCACGCAGCGGTGCCGCTTCCCGCTCCGC
AGGCTGTCGGCGCCGCCGTGGCCGCAGCCGTTCTGCACCGAGTCCAGCGGCGGCCTCGTC
ACCCCGTCGGCCTCCAAGCGGAGGTCCAGGGGCCCCGTCATGGCCGCGAAGAAGGCCGCG
GAGGGCGAAAAACAAGAAGATGGAAAATACAAGCACACTGTGGATCTCCCGAAAACAACA
TTTGGGCTGAGAGCGAATTCTGTACAGCGGGAGCCAGAGCTCCAAAAATTATGGGACGAT
AATCAGGTTCTGAAAAGGGTTTCTGAAAGGAACACTGGGACTGCTTTTGTTCTCCACGAT
GGCCCTCCCTATGCTAATGGTGATCTTCACATGGGCCATGCGCTCAATAAAATCCTCAAG
GATTTTATAAATCGCTACAAGCTGCTTCAGAATCATAAAGTGTCCTTTGTTCCTGGTTGG
GATTGCCACGGCCTTCCAATAGAACTAAAAGTTTTGAAGTCAATGGATAAGGAAACTTTG
AGTGCTCTTACACCCATAAAATTAAGACAAAAAGCTGCAAAATTTGCTAAAGCAACAGTC
GATGCACAAATGAAATCTTTCAAGCGGTATGGTGTATGGGCCGATTGGGACAACCCTTAC
CTAACTCTGTCACCGGAATACGAAGCTGCTCAGTTGGAAGTGTTTGGGCAAATGGTTATG
AAAGGATATATCTATAGAGGACGAAAGCCTGTCCATTGGAGTCCATCATCACGTACGGCT
TTGGCAGAAGCTGAACTGGAGTATTCCGAAAATCACATTTCCAGAAGCATATATGCCGCA
TTCAAGATTACTAATCCATCTAAATCTGGGATGCTAGACGATTTTTTTCCAAATGTATCT
TTGGTCATATGGACCACCACTCCATGGACAATTCCGGCTAATGCTGCTGTTGCTGTGAAC
CCAAAGCTTATTTATGCAGTAGCTGAGGTACAGTCTGTATTTGAAAGTGAGTCAACATCC
GGTGGTAAACAAAGAAAAGTTGGAAATATATTGAGTTCTGAGAAAGGAAAACTGTTCGTT
ATTGTGGCTTCTGATCTTATCACAACTCTTGAGTCCAAATGGGGTGTGAAGCTTGTAGTA
CACAAATCATTTCCCGGATCTGCCTTGGAGCACTGCAGGTATGCCCATCCTGTGAATAGC
AACGAATGTTCCGTCATTCTAGGAGGAGATTACATTACAACTGAATCGGGCACTGGCCTT
GTTCATACTGCCCCTGGCCATGGCCAGGAAGACTACATAACAGGTTTGAAGTATGGGCTT
CCTATCATTTCTCCTGTGGACGATGAAGGGAACTTCACGGCTGAAGCTGGACAGTTCGGT
GGTTTGTCTGTCCTGGGGGCTGGCAATGCTGCAGTTGTGAAGTATCTGGATGAACAGTAT
TCACTCATTTTAGAGGAACCATACAAACACAAGTACCCCTATGACTGGAGATCTAAAGAA
CCAACTATATTCCGAGCAACTGAGCAGTGGTTTGCATCTGTGGATGGTTTTCGTGATGCT
GCAATGGATGCAATCAGACGAGTAACTTGGGTTCCTTCTCAGGCACAAAACAGGATTGTT
GCCATGACCTCTAGCCGTTCTGATTGGTGTATTTCACGGCAGAGAACTTGGGGTGTCCCT
ATTCCAGTTTTTTACCATGTGGACTCACAGGAACCTCTTATAACTGAAGAAACGATTGAA
CACATCAAGGCTATTGTGTTGAAGAAAGGTAGCGATGCATGGTGGTATATGACAACTGAG
GAACTTCTTCCAGATAGATATCGGGACAAAGCATCTGAATATCGCAAGGGAACTGATACA
ATGGATGTTTGGTTTGACTCTGGCTCTTCATGGGCAGCTGTTTTAGCAAAAAGGGACGGT
CTTAATTTTCCTGCGGATATTTATCTTGAAGGTTCAGATCAACATCGTGGATGGTTCCAG
AGCTCATTGTTGACTAGCATTGCTACAACAGGGAAGGCTCCCTACTCCAGTGTTATTACA
CATGGATTTGTACTGGATGAAAAGGGTTTCAAAATGAGTAAATCAATTGGTAATGTAGTG
GACCCAGAGAAAATCATTGTTGGTGGCAAAAACCATAGGGAAGAACCTGGCTATGGAGCA
GATGTTCTCCGTCTATGGGTTTCTAGTGTTGATTACACTACAGATGTGTTGATTGGCCCA
CAAATCTTGCGCCAGATGTCTGACATGTATAGAAAACTACGAGGCACGATGCGATTTCTT
TTGTCGAATCTCCATGATTGGAAGCCGGATAATTCTGTGCCGTACAATGATCTGCCAAAA
ATCGACAAGTATGCACTTTTCCATTTGGAGACTGTCATGACTTCCATGAAGGATAGTTAT
GAAAGTTATCAATTCTATAAAGTATACCAGATCCTTCAAAGATTTGCTACTGTTGGTTTG
TCCAATTTCTATTTGGATGTTGCAAAGGATCGCCTTTATGTTGGGCCGAGTCAGCTTCAC
AAGGAAAAGTTGTCAGACTGTGCTCATGGCACATCTGCTCTACCTTGTTAG

Peptide Sequence

PEP ID

Zm00001d018274_P016
PEP Infomation

pep chromosome:B73_RefGen_v4:5:217743843:217763194:1 gene:Zm00001d018274 transcript:Zm00001d018274_T016 gene_biotype:protein_coding transcript_biotype:protein_coding description:Isoleucine--tRNA ligase chloroplastic/mitochondrial
Sequence

MEAASCCRVFSTQRCRFPLRRLSAPPWPQPFCTESSGGLVTPSASKRRSRGPVMAAKKAA
EGEKQEDGKYKHTVDLPKTTFGLRANSVQREPELQKLWDDNQVLKRVSERNTGTAFVLHD
GPPYANGDLHMGHALNKILKDFINRYKLLQNHKVSFVPGWDCHGLPIELKVLKSMDKETL
SALTPIKLRQKAAKFAKATVDAQMKSFKRYGVWADWDNPYLTLSPEYEAAQLEVFGQMVM
KGYIYRGRKPVHWSPSSRTALAEAELEYSENHISRSIYAAFKITNPSKSGMLDDFFPNVS
LVIWTTTPWTIPANAAVAVNPKLIYAVAEVQSVFESESTSGGKQRKVGNILSSEKGKLFV
IVASDLITTLESKWGVKLVVHKSFPGSALEHCRYAHPVNSNECSVILGGDYITTESGTGL
VHTAPGHGQEDYITGLKYGLPIISPVDDEGNFTAEAGQFGGLSVLGAGNAAVVKYLDEQY
SLILEEPYKHKYPYDWRSKEPTIFRATEQWFASVDGFRDAAMDAIRRVTWVPSQAQNRIV
AMTSSRSDWCISRQRTWGVPIPVFYHVDSQEPLITEETIEHIKAIVLKKGSDAWWYMTTE
ELLPDRYRDKASEYRKGTDTMDVWFDSGSSWAAVLAKRDGLNFPADIYLEGSDQHRGWFQ
SSLLTSIATTGKAPYSSVITHGFVLDEKGFKMSKSIGNVVDPEKIIVGGKNHREEPGYGA
DVLRLWVSSVDYTTDVLIGPQILRQMSDMYRKLRGTMRFLLSNLHDWKPDNSVPYNDLPK
IDKYALFHLETVMTSMKDSYESYQFYKVYQILQRFATVGLSNFYLDVAKDRLYVGPSQLH
KEKLSDCAHGTSALPC

Transcript Sequence

Transcript ID

Zm00001d018274_T016
Transcript Infomation

cdna chromosome:B73_RefGen_v4:5:217743843:217763194:1 gene:Zm00001d018274 gene_biotype:protein_coding transcript_biotype:protein_coding description:Isoleucine--tRNA ligase chloroplastic/mitochondrial
Sequence

GTTGCCCGCTCCGTTCAGAAGCGCCTCGCCGCTGACCGGTCGTGACCCGCCTCGCACCTC
CGCCTTCTCCGTCCCTCGCGGCCGCGGCTGCCGCCGAATGGAAGCCGCCTCATGCTGCCG
CGTCTTCTCCACGCAGCGGTGCCGCTTCCCGCTCCGCAGGCTGTCGGCGCCGCCGTGGCC
GCAGCCGTTCTGCACCGAGTCCAGCGGCGGCCTCGTCACCCCGTCGGCCTCCAAGCGGAG
GTCCAGGGGCCCCGTCATGGCCGCGAAGAAGGCCGCGGAGGGCGAAAAACAAGAAGATGG
AAAATACAAGCACACTGTGGATCTCCCGAAAACAACATTTGGGCTGAGAGCGAATTCTGT
ACAGCGGGAGCCAGAGCTCCAAAAATTATGGGACGATAATCAGGTTCTGAAAAGGGTTTC
TGAAAGGAACACTGGGACTGCTTTTGTTCTCCACGATGGCCCTCCCTATGCTAATGGTGA
TCTTCACATGGGCCATGCGCTCAATAAAATCCTCAAGGATTTTATAAATCGCTACAAGCT
GCTTCAGAATCATAAAGTGTCCTTTGTTCCTGGTTGGGATTGCCACGGCCTTCCAATAGA
ACTAAAAGTTTTGAAGTCAATGGATAAGGAAACTTTGAGTGCTCTTACACCCATAAAATT
AAGACAAAAAGCTGCAAAATTTGCTAAAGCAACAGTCGATGCACAAATGAAATCTTTCAA
GCGGTATGGTGTATGGGCCGATTGGGACAACCCTTACCTAACTCTGTCACCGGAATACGA
AGCTGCTCAGTTGGAAGTGTTTGGGCAAATGGTTATGAAAGGATATATCTATAGAGGACG
AAAGCCTGTCCATTGGAGTCCATCATCACGTACGGCTTTGGCAGAAGCTGAACTGGAGTA
TTCCGAAAATCACATTTCCAGAAGCATATATGCCGCATTCAAGATTACTAATCCATCTAA
ATCTGGGATGCTAGACGATTTTTTTCCAAATGTATCTTTGGTCATATGGACCACCACTCC
ATGGACAATTCCGGCTAATGCTGCTGTTGCTGTGAACCCAAAGCTTATTTATGCAGTAGC
TGAGGTACAGTCTGTATTTGAAAGTGAGTCAACATCCGGTGGTAAACAAAGAAAAGTTGG
AAATATATTGAGTTCTGAGAAAGGAAAACTGTTCGTTATTGTGGCTTCTGATCTTATCAC
AACTCTTGAGTCCAAATGGGGTGTGAAGCTTGTAGTACACAAATCATTTCCCGGATCTGC
CTTGGAGCACTGCAGGTATGCCCATCCTGTGAATAGCAACGAATGTTCCGTCATTCTAGG
AGGAGATTACATTACAACTGAATCGGGCACTGGCCTTGTTCATACTGCCCCTGGCCATGG
CCAGGAAGACTACATAACAGGTTTGAAGTATGGGCTTCCTATCATTTCTCCTGTGGACGA
TGAAGGGAACTTCACGGCTGAAGCTGGACAGTTCGGTGGTTTGTCTGTCCTGGGGGCTGG
CAATGCTGCAGTTGTGAAGTATCTGGATGAACAGTATTCACTCATTTTAGAGGAACCATA
CAAACACAAGTACCCCTATGACTGGAGATCTAAAGAACCAACTATATTCCGAGCAACTGA
GCAGTGGTTTGCATCTGTGGATGGTTTTCGTGATGCTGCAATGGATGCAATCAGACGAGT
AACTTGGGTTCCTTCTCAGGCACAAAACAGGATTGTTGCCATGACCTCTAGCCGTTCTGA
TTGGTGTATTTCACGGCAGAGAACTTGGGGTGTCCCTATTCCAGTTTTTTACCATGTGGA
CTCACAGGAACCTCTTATAACTGAAGAAACGATTGAACACATCAAGGCTATTGTGTTGAA
GAAAGGTAGCGATGCATGGTGGTATATGACAACTGAGGAACTTCTTCCAGATAGATATCG
GGACAAAGCATCTGAATATCGCAAGGGAACTGATACAATGGATGTTTGGTTTGACTCTGG
CTCTTCATGGGCAGCTGTTTTAGCAAAAAGGGACGGTCTTAATTTTCCTGCGGATATTTA
TCTTGAAGGTTCAGATCAACATCGTGGATGGTTCCAGAGCTCATTGTTGACTAGCATTGC
TACAACAGGGAAGGCTCCCTACTCCAGTGTTATTACACATGGATTTGTACTGGATGAAAA
GGGTTTCAAAATGAGTAAATCAATTGGTAATGTAGTGGACCCAGAGAAAATCATTGTTGG
TGGCAAAAACCATAGGGAAGAACCTGGCTATGGAGCAGATGTTCTCCGTCTATGGGTTTC
TAGTGTTGATTACACTACAGATGTGTTGATTGGCCCACAAATCTTGCGCCAGATGTCTGA
CATGTATAGAAAACTACGAGGCACGATGCGATTTCTTTTGTCGAATCTCCATGATTGGAA
GCCGGATAATTCTGTGCCGTACAATGATCTGCCAAAAATCGACAAGTATGCACTTTTCCA
TTTGGAGACTGTCATGACTTCCATGAAGGATAGTTATGAAAGTTATCAATTCTATAAAGT
ATACCAGATCCTTCAAAGATTTGCTACTGTTGGTTTGTCCAATTTCTATTTGGATGTTGC
AAAGGATCGCCTTTATGTTGGGCCGAGTCAGCTTCACAAGGAAAAGTTGTCAGACTGTGC
TCATGGCACATCTGCTCTACCTTGTTAGGGCCATTTCCCCGATTATGCCTCACCTAGCTG
AGGATGTCTGGCAGAACCTACCCTTTCAATACACCTTGCAGGATGGATCCCTTGCAAACT
TTGTTTTTGATCTGAAATGGCCAGAAAAGAATGAAGAATGGCTCTCGGCCCCGAAGGATG
ATGTTGATTTCCTGGGTGTTATCCTGGAGTTGAGGTCAGAGGTCAACAAAATTTTGGAGA
ATGCTCGCACTGGAAAGTTGATTGGTTCTAGCTTAGATGCAAAGGTTTATCTCCATACCG
AAAGTTCAGATACGGTATTAAAGCTAAAGGAGCTATCTTCTGCATCCAATGATGCAGACG
CTCTGCATCGCCTGTTTATCACATCTCAGGTCGATATTCTTCCAATCCTAAATGAAGAGA
TTACATCATCTGTACCATACACAGGAAAGTTCAGTAACCCACGCACTGGAGTCATATGGA
TTGGTGTGACTCGTGCGGATGGTGCAAAATGTGAGAGGTGTTGGAATTACACACAGGACG
TTGGATCTTTCCATGACCATCCTACTCTCTGCGTTCGGTGCTATGGTGTCATTGAGTTGC
AGACACAACCTGCGGCCGCAGCTGTCAGTTGAAAGGAGTGATGTTAACGTATCCTATCGA
ACCATCTAATTTTGAGGATCATTGGTGGAATTCATTCTTTTGGAGAGCTTTCACGCTACC
ATGTGGCGGTAGCCTGGGACTCCAGCTTGAATCAAGTTTTGCATGCAGCAAGCTGTACTT
TAGATTCTTCATACATAGGTCACGAGAGTTGTTTGGAGCTTGGGTCATCGCTTACTTTCC
CATACTACTGGGGGGCTTATTTGGAACAGTTTTTTACACAAAACTCCTGACCTGTAAATC
AATTTTGGAAAACCGTATCCGGTGGTCGATCCATGTATTAATAGAGTAATAATGTTACTA
TGTTCATCCAAATCTCAAAGACGTGATGGTTGTGTTGAAAAAACAGCTTGAATCACTTGC