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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d018255_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:5:217462041:217466991:-1 gene:Zm00001d018255 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CCAAT-HAP2-transcription factor 213 description:Nuclear transcription factor Y subunit A-3

Sequence

ATGTACGCGTCCCTGGATTGCTCCGTTAAGCATCTCCTTTTGATGTCGGGTTGTGTGTGC
TATCTCGGATTGGGTTGCATGTCCCTTGGGAACACAGGTAACTCCTTTGGGAAAACCGTT
AACGATCATCTGAGGTCAACTTTGAGTTTTGATAACAAGCAACCTCCATTTGCGAGTCAA
AACTTTGACTACGGTCAAACAATAGCTTGCATTTCATACCCGTACAATCGTTCTAGATCA
GGAGATGTTTGGGCAGCCTATGAGTCACGCACCAGCACTGCCACTGTGTTGCATTTAAAG
CAGTTCCGTTCCCAAATTGCTGGTGGGGGTTCATCCACAAGAATTCCCTTGCCTTTGGAA
TTAGCAGAGAATGAACCCATATATGTGAATCCCAAACAATATCACGGGATACTTCGCAGA
AGACAGTTACGTGCCAAGCTAGAGGCTCAGAACAAGCTAGTCAGAGCCCGAAAGCCTTAC
CTTCATGAGTCTAGGCATCTTCATGCAATGAAGAGGGCACGAGGTTCCGGTGGACGATTC
CTCAACACTAAGCAGCTCCAGCAGTCTCACACAGCCCTCACCAGGTCCACCACCACAAGT
GGCACAAGCTCCTCAGGCTCAACTCATCTGCGGCTTGGTGGTGGCGCAGCCGCAGCTGGA
GATCGATCTGTGCTGGCACCCAAAACAATGGCCTCACAAGACAGTAGCAAGAAGGCCGTT
TCTTCAGCCCTCGCCTTCACTGCGACTCCAATGCTGCGCAGAGATGACGGCTTCTTGCAG
CACCCAAGCCATCTTTTCAGTTTTTCTGGTCATTTTGGGCAGGCAAGCGCGCAAGCTGGC
GTCCATAATGGAAGTCAGCATAGGGTTCCAGTTATGAGATGA

Peptide Sequence

PEP ID

Zm00001d018255_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:5:217462041:217466991:-1 gene:Zm00001d018255 transcript:Zm00001d018255_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CCAAT-HAP2-transcription factor 213 description:Nuclear transcription factor Y subunit A-3

Sequence

MYASLDCSVKHLLLMSGCVCYLGLGCMSLGNTGNSFGKTVNDHLRSTLSFDNKQPPFASQ
NFDYGQTIACISYPYNRSRSGDVWAAYESRTSTATVLHLKQFRSQIAGGGSSTRIPLPLE
LAENEPIYVNPKQYHGILRRRQLRAKLEAQNKLVRARKPYLHESRHLHAMKRARGSGGRF
LNTKQLQQSHTALTRSTTTSGTSSSGSTHLRLGGGAAAAGDRSVLAPKTMASQDSSKKAV
SSALAFTATPMLRRDDGFLQHPSHLFSFSGHFGQASAQAGVHNGSQHRVPVMR

Transcript Sequence

Transcript ID

Zm00001d018255_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:5:217462041:217466991:-1 gene:Zm00001d018255 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CCAAT-HAP2-transcription factor 213 description:Nuclear transcription factor Y subunit A-3

Sequence

TTCCATCTCTCTCTCCCGCCATATGACTAGTGTTCCTGTTGGCTGTTGCTGTGTCGGTCC
GCCATGTACGCGTCCCTGGATTGCTCCGTTAAGCATCTCCTTTTGATGTCGGGTTGTGTG
TGCTATCTCGGATTGGGTTGCATGTCCCTTGGGAACACAGGTAACTCCTTTGGGAAAACC
GTTAACGATCATCTGAGGTCAACTTTGAGTTTTGATAACAAGCAACCTCCATTTGCGAGT
CAAAACTTTGACTACGGTCAAACAATAGCTTGCATTTCATACCCGTACAATCGTTCTAGA
TCAGGAGATGTTTGGGCAGCCTATGAGTCACGCACCAGCACTGCCACTGTGTTGCATTTA
AAGCAGTTCCGTTCCCAAATTGCTGGTGGGGGTTCATCCACAAGAATTCCCTTGCCTTTG
GAATTAGCAGAGAATGAACCCATATATGTGAATCCCAAACAATATCACGGGATACTTCGC
AGAAGACAGTTACGTGCCAAGCTAGAGGCTCAGAACAAGCTAGTCAGAGCCCGAAAGCCT
TACCTTCATGAGTCTAGGCATCTTCATGCAATGAAGAGGGCACGAGGTTCCGGTGGACGA
TTCCTCAACACTAAGCAGCTCCAGCAGTCTCACACAGCCCTCACCAGGTCCACCACCACA
AGTGGCACAAGCTCCTCAGGCTCAACTCATCTGCGGCTTGGTGGTGGCGCAGCCGCAGCT
GGAGATCGATCTGTGCTGGCACCCAAAACAATGGCCTCACAAGACAGTAGCAAGAAGGCC
GTTTCTTCAGCCCTCGCCTTCACTGCGACTCCAATGCTGCGCAGAGATGACGGCTTCTTG
CAGCACCCAAGCCATCTTTTCAGTTTTTCTGGTCATTTTGGGCAGGCAAGCGCGCAAGCT
GGCGTCCATAATGGAAGTCAGCATAGGGTTCCAGTTATGAGATGACCGGTTTGCGAACCA
TAGCTGGTGATCCAGGCGTCTAGGGTCAACTTCGCTGTGGTGTCTTAGTCTCTCAGGCAA
TTCATCCTTGGCTTAATTTCTGGCTTTTTATTAGAAGGTACCAAAATGTGTTCCATACCG
TTGTGGCCACAGAGCCCATAAACCAGGGGGTTTGATGGTTGGCACTCCTACCCAAACTAT
TGTTGCAGTGGTGTTTGTTAGAATAAACCTTGACTATTATTCTGTACAATTTGCCTTTAT
CTTGTACTGCCAATTATTGTGTAGTGGTCACCTGTCCAGTTTATGGCCTCAAGACTAGTC
TACCCTGTTTGTCACAACATCTGCCCTGAAAAATCATACTGCAGCTGTACTGGAGTGGTC
CGTCCCAGCTGTGATCTTCCTAATTTTTAGCCGTACAAACCAGAAT