Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d018225_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:5:216949284:216953293:1 gene:Zm00001d018225 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Homeobox-transcription factor 71 description:Homeodomain leucine zipper family IV protein
Sequence	ATGGACTTCGGCGACGACGTCATGGACGGCGGCTCCGACGCGCAGCGCCGCAAGAAGAGA TACCACCGCCACACTCCGCGCCAGATTCAGCAGCTCGAGGCGATGTTCAAGGAGTGCCCG CACCCGGACGAGAACCAGCGGATGCAGCTGAGCAGGGAGCTGGGGCTGGAGCCCCGGCAG ATCAAGTTCTGGTTCCAGAACCGCCGGACGCAGATGAAGGCGCAGCACGAGCGCCAGGAC AACTGTTTCCTGCGCGCGGAGAACGACAAGATCCGGTGCGAGAACATCGCCATGCAGGAG GCGCTCCGGAACGTCATCTGCCCCACCTGCGGCGGCCCGCCCGTCGCCGACGACCATTTT GACGAGCAGAAGCTGCGCATGGAGAACGCGCGACTCAAAGAAGAGCTTGACCGGGTGTCC AGCCTGACGTCCAAGTACCTGGGGCGGCCCATCACGCAGCTGCCGTCGGCGCAGGCGCTG TCCATGTCGTCGCTGGACCTGTCCGTCGGCGGGCTCGGCGGCCCGTCGCTGGACCTCGAC CTCCTCAGCGGCGGCTCCTCGGGGTATCCCCCGTTCCACCTCCTCCCGATGGCGGTGTCG GAGATGGAGCGGCCCATGATGGCCGAGATGGCGACGCGCGCCATGGACGAGCTCATCAGG ATGGCGCAGGCCGGCGAGCACCTGTGGGTCAAGACGGGCGGCCGCGAGGTGCTCAATGTC GACACGTACGACAGCATCTTCGCCAAGCCCGACGGCTCGTTCCGCGGCCCGGACGTGCAC GTCGAGGGCTCCCGCGAGACGGGGCTCGTCTTCATGAGCGCCATCGGCCTCGTCGACATG TTCATGGACTCGAGCAAGTGGACGGAGCTCTTCCCTGCCATCGTGTCCAAAGCGCGCACG GTCGACGTCCTCGTGAACGGCATGGGCGGGCGGAGCGAGTCTTTGCTTCTGATGTACGAG GAGCTGCACGTGATGTCGCCGGTCGTCCCGACGCGCGAGTTCTGCTTCCTCCGCTACTGC AGGCAGATCGAGCACGGGCTATGGGCGATCGCGGACATCTCGGTGGACCAGCAGCAGCGC GACGCGAGGTTCGGCGCGCCCCCGTCGCGCTCGTGCCGCCTCCCGTCGGGATGCCTCATC GCCGACATGGCCGACGGCTCGTCCAAGGTGACCTGGGTCGAGCACATGGAGATCGAGGAT CGGGTTCCCATCCACCTGCTCTACCGCGACCTCGTCCTCAGCGGGGCGGCGTTCGGCGCG CACCGTTGGCTCGCCGCGCTGCAGAGGGCGTGCGAGCGGTGCGCGTGCCTCGCCACGGCC GGCATTATGCCGCACCGGGACATTGCAGCGGCAGGAGTGACGCCGGAAGGGAAGCGGAGC ATGATGAAGCTGTCGCAGCGGATGGTGAACAGCTTCTGCGCGAGCCTTAGCGCGTCGCAG CTCCACCGGTGGACGACGCTGTCGGGGCCCAACGACGTGGGCGTCCGCGTCATGGTGCAC CGCAGCACGGACCCGGGGCAGCCCAGCGGCGTGGTGCTCAGCGCGGCCACGTCCATCTGG CTGCCGGTCCCGTGCGACCGGGCGTTTGCCTTTGTCCGCGACGAGCATACGCGCTCCCAG TGGGACGTGCTGTCGCACGGCAACCCGGTGCAGGAGGTGTCGCGCATCCCCAACGGCTCT CACCCTGGAAACTGCATCTCCTTGCTGAGAGGCCTGAACGCGAGCCAGAACAGCATGCTG ATCCTGCAGGAGAGCTGCACCGACGCGTCAGGCTCGCTGGTGGTGTACGCGCCGATCGAC ATCCCGGCGGCCAACGTGGTGATGAGCGGCGAGGACCCGTCCGCGATCCCGCTCCTGCCG TCCGGCTTCTCCATCCTGCCCGACGGGCGGCCCGGCGCGTCGTCGTCGAGGGCCGGCCAG GCGCCGTCGGCGGGGTCGCTGGTGACGGTGGCGTTCCAGATCCTGGTGAGCAGCCTGCCG TCGGCGAAGCTGAACGCCGAGTCGGTGGCGACGGTCAACAGCCTCATCAGCACCACTGTG GAGCAAATTAAGGCGGCCTTGAATTGCGCCAGCCATTGA

Peptide Sequence

PEP ID	Zm00001d018225_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:5:216949284:216953293:1 gene:Zm00001d018225 transcript:Zm00001d018225_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Homeobox-transcription factor 71 description:Homeodomain leucine zipper family IV protein
Sequence	MDFGDDVMDGGSDAQRRKKRYHRHTPRQIQQLEAMFKECPHPDENQRMQLSRELGLEPRQ IKFWFQNRRTQMKAQHERQDNCFLRAENDKIRCENIAMQEALRNVICPTCGGPPVADDHF DEQKLRMENARLKEELDRVSSLTSKYLGRPITQLPSAQALSMSSLDLSVGGLGGPSLDLD LLSGGSSGYPPFHLLPMAVSEMERPMMAEMATRAMDELIRMAQAGEHLWVKTGGREVLNV DTYDSIFAKPDGSFRGPDVHVEGSRETGLVFMSAIGLVDMFMDSSKWTELFPAIVSKART VDVLVNGMGGRSESLLLMYEELHVMSPVVPTREFCFLRYCRQIEHGLWAIADISVDQQQR DARFGAPPSRSCRLPSGCLIADMADGSSKVTWVEHMEIEDRVPIHLLYRDLVLSGAAFGA HRWLAALQRACERCACLATAGIMPHRDIAAAGVTPEGKRSMMKLSQRMVNSFCASLSASQ LHRWTTLSGPNDVGVRVMVHRSTDPGQPSGVVLSAATSIWLPVPCDRAFAFVRDEHTRSQ WDVLSHGNPVQEVSRIPNGSHPGNCISLLRGLNASQNSMLILQESCTDASGSLVVYAPID IPAANVVMSGEDPSAIPLLPSGFSILPDGRPGASSSRAGQAPSAGSLVTVAFQILVSSLP SAKLNAESVATVNSLISTTVEQIKAALNCASH

Transcript Sequence

Transcript ID	Zm00001d018225_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:216949284:216953293:1 gene:Zm00001d018225 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Homeobox-transcription factor 71 description:Homeodomain leucine zipper family IV protein
Sequence	AGCCCTCCCGGCCCGGATTGCGCTCGAAGCAAGCGGCCGCCCGAGGCGAGGCGTGCGCGC GCCGCGATGGACTTCGGCGACGACGTCATGGACGGCGGCTCCGACGCGCAGCGCCGCAAG AAGAGATACCACCGCCACACTCCGCGCCAGATTCAGCAGCTCGAGGCGATGTTCAAGGAG TGCCCGCACCCGGACGAGAACCAGCGGATGCAGCTGAGCAGGGAGCTGGGGCTGGAGCCC CGGCAGATCAAGTTCTGGTTCCAGAACCGCCGGACGCAGATGAAGGCGCAGCACGAGCGC CAGGACAACTGTTTCCTGCGCGCGGAGAACGACAAGATCCGGTGCGAGAACATCGCCATG CAGGAGGCGCTCCGGAACGTCATCTGCCCCACCTGCGGCGGCCCGCCCGTCGCCGACGAC CATTTTGACGAGCAGAAGCTGCGCATGGAGAACGCGCGACTCAAAGAAGAGCTTGACCGG GTGTCCAGCCTGACGTCCAAGTACCTGGGGCGGCCCATCACGCAGCTGCCGTCGGCGCAG GCGCTGTCCATGTCGTCGCTGGACCTGTCCGTCGGCGGGCTCGGCGGCCCGTCGCTGGAC CTCGACCTCCTCAGCGGCGGCTCCTCGGGGTATCCCCCGTTCCACCTCCTCCCGATGGCG GTGTCGGAGATGGAGCGGCCCATGATGGCCGAGATGGCGACGCGCGCCATGGACGAGCTC ATCAGGATGGCGCAGGCCGGCGAGCACCTGTGGGTCAAGACGGGCGGCCGCGAGGTGCTC AATGTCGACACGTACGACAGCATCTTCGCCAAGCCCGACGGCTCGTTCCGCGGCCCGGAC GTGCACGTCGAGGGCTCCCGCGAGACGGGGCTCGTCTTCATGAGCGCCATCGGCCTCGTC GACATGTTCATGGACTCGAGCAAGTGGACGGAGCTCTTCCCTGCCATCGTGTCCAAAGCG CGCACGGTCGACGTCCTCGTGAACGGCATGGGCGGGCGGAGCGAGTCTTTGCTTCTGATG TACGAGGAGCTGCACGTGATGTCGCCGGTCGTCCCGACGCGCGAGTTCTGCTTCCTCCGC TACTGCAGGCAGATCGAGCACGGGCTATGGGCGATCGCGGACATCTCGGTGGACCAGCAG CAGCGCGACGCGAGGTTCGGCGCGCCCCCGTCGCGCTCGTGCCGCCTCCCGTCGGGATGC CTCATCGCCGACATGGCCGACGGCTCGTCCAAGGTGACCTGGGTCGAGCACATGGAGATC GAGGATCGGGTTCCCATCCACCTGCTCTACCGCGACCTCGTCCTCAGCGGGGCGGCGTTC GGCGCGCACCGTTGGCTCGCCGCGCTGCAGAGGGCGTGCGAGCGGTGCGCGTGCCTCGCC ACGGCCGGCATTATGCCGCACCGGGACATTGCAGCGGCAGGAGTGACGCCGGAAGGGAAG CGGAGCATGATGAAGCTGTCGCAGCGGATGGTGAACAGCTTCTGCGCGAGCCTTAGCGCG TCGCAGCTCCACCGGTGGACGACGCTGTCGGGGCCCAACGACGTGGGCGTCCGCGTCATG GTGCACCGCAGCACGGACCCGGGGCAGCCCAGCGGCGTGGTGCTCAGCGCGGCCACGTCC ATCTGGCTGCCGGTCCCGTGCGACCGGGCGTTTGCCTTTGTCCGCGACGAGCATACGCGC TCCCAGTGGGACGTGCTGTCGCACGGCAACCCGGTGCAGGAGGTGTCGCGCATCCCCAAC GGCTCTCACCCTGGAAACTGCATCTCCTTGCTGAGAGGCCTGAACGCGAGCCAGAACAGC ATGCTGATCCTGCAGGAGAGCTGCACCGACGCGTCAGGCTCGCTGGTGGTGTACGCGCCG ATCGACATCCCGGCGGCCAACGTGGTGATGAGCGGCGAGGACCCGTCCGCGATCCCGCTC CTGCCGTCCGGCTTCTCCATCCTGCCCGACGGGCGGCCCGGCGCGTCGTCGTCGAGGGCC GGCCAGGCGCCGTCGGCGGGGTCGCTGGTGACGGTGGCGTTCCAGATCCTGGTGAGCAGC CTGCCGTCGGCGAAGCTGAACGCCGAGTCGGTGGCGACGGTCAACAGCCTCATCAGCACC ACTGTGGAGCAAATTAAGGCGGCCTTGAATTGCGCCAGCCATTGATGGAGCCCTGCCCGG CCGATGGATCCATATGGAATTGATGCGTGCGTGCATGCATGCACGCGTAGGTCTCTTCTC CTCCCCTCGGCCGGCCGCCTGCCGCTCGCCTGCTGGCTGCTGCGAGGAGTGAATTCCCTT CAAGGCGCTGGTTCGCGACGGGGTTCTTGGTTGGTTGGGGGCCTTCAATGCTGGCCATTC ATGGAGGCGGGGCTGCTGCCATGGTGTCGCCCGCTTGGGGTTCACCTGCCGCTGTTGCTG CGCCGTCCGATCACCCATGATCATTCAGCTCTCTCTCTCTCTCTCTCTTCCCGCCACTCA TGCATGCATGATAGCTTTTCCTCTTACAGGATTTGAAGCTTGCTCGCGAGGCTTTGCATG AAACGGAGGAGTCAAGAACGCACCATGCTCGTCTCATTCCTCTTGCTGCCGTCACGCTCG GTTGTTAATTAATTCCATTGCTCTTTTAATTTGTGCCTCCCCCCTCTCCCTAGTTTTTGC AGTCTCACATTCTGTAGTCTGCAGCAGAGGATGATGAATGGTTCGGGTATTGACTTCTGT CTAATGGTGTTAAGCCTTCAATGATCATTAGTTCTACTTGTTTTTTAGTAGAGATAATTA AGACAAATACCACTGTCACTGCTTTGATTGTATCTTTTCATTCTTCCATCCCTCTCGCTC ACTGCTTTGATTGTTC