Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d018219_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:5:216823300:216826617:1 gene:Zm00001d018219 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein mitochondrial
Sequence	ATGCCGCCGCCTCTCCCCGCCGCCGGCGGATCCGCCGCGCGCGCCATCGCCATTCGCATG CTTTCCACAAATACTGTGCCTGTCGAAGCCGCCTCCCTACCTCACACTCTCGCGTTGCCG CCCATCGCCCCATCCCCCGCCGCCGACGAGCTCGCGCGCCTCCTCCTCGCGCACCACAAC CCCTTCCACCCGGCCGAGTCCCCGCTCCAGCTCCTCTCCGGCGGCGGCGTATCCCTCTCC GGGGACCTCCTGGTCCAGATCCTCCTCCGCCTCCGTGGTGCGTCCAAGCTCGCGCTCTCG CTCCTCCACGCCGCGCGCCTCCACCCGTCCTTCGTCAACACGCAGCCCCGTTCCGACGCC TACGACGCCGTGGTCGACGCCCTCGGCCGCGCGCGCCAGTTCGACGCCGCGTGGCGCGTC GTCGTGGACGCGTCGGCGGACGGCGCCGCTTCTCCACGCACGTTCGCGGTGCTGGCGAGG AGATACGTCGCCGCGGGTATGACCAGACAAGCGATTCGCGCGTTCGACGACATGGAGGCG TTTGTCAGCAGGGAGCCTGATGCCGCTGAGTTTGCCACGCTGCTCGACACGCTATGCAAG TACAAGTACCCCAAGGTTGCTACAGAGGTATTTAATAAAAGGAAATACAAGTACGGGCCA AATGAAAAGATGTACTCTATTTTAATTTATGGATGGTGCAAGGTGAATCGGAGTGACATG GCTAAGAAGTTCCTAAAAGATATGCTTGTTCATGGCATAGAACCAAACATTGTTACATAC AACATCCTTCTAAATGGTATCTGCAGGCATGCAAGCTTGCACCCTGATTACCGATTTGAT AGAACAGTTCATGCAGCAGAGGATCTCTTGAAGGAGATGCGTGGCAGGGGAATTGAACCA GATGTAACCAGTTATTCAATCATTCTGCATGTTTACAGTCGTGCACATAAACCTGAGTTG TGTCTCTGCATGTTCCGCTCGATGAAAGAAAGAGGCATTTGCCCCACAGTGGCAACATAC ACTTCTGTGATAAAGTGTCTTTCCTCTTGTGGGAGATTGGAAGATGGTGAAATTTTGCTT GATGAGATGGTTGCTGAGGGAGTATGTCCCTCCCCGGCTACCTACAATTGCTTCCTCAAG GAGTATCGGGGAAGAAAAGATGTGACTGCTGCCTTAGAACTGTATAATAAGATGAAGGCA CCTGGTTCACTGACCGCACCAGATATTCACACTTACAACATACTGCTGGGAATGTTCAGC AAGCTGAATCGACATGGAACTGTTATGGACATTTGGAGTGATATGTGTGAAAGCACTGTG GGTCCTGATCTTGATTCATACACTTTGTTGATCCATTGCTTTTGTGATAGTCAGAAGTGG AGGGAAGCATGTCAGTTCTTCATGGAGATGATCGAGAAAGGTTTTCTTCCCCAAAAGATC ACCTTTGAGACACTGTATCGTGGTCTAATACAAGCAGATATGCTGCGGACCTGGAGAAGG CTTAAGAGAAGGGTTGATGAAGAAGCAGCAAAATTTGGCGATGAGTTCAAACTCTACCAC ATGAAGCCTTACAAGAGGTGA

Peptide Sequence

PEP ID	Zm00001d018219_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:5:216823300:216826617:1 gene:Zm00001d018219 transcript:Zm00001d018219_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein mitochondrial
Sequence	MPPPLPAAGGSAARAIAIRMLSTNTVPVEAASLPHTLALPPIAPSPAADELARLLLAHHN PFHPAESPLQLLSGGGVSLSGDLLVQILLRLRGASKLALSLLHAARLHPSFVNTQPRSDA YDAVVDALGRARQFDAAWRVVVDASADGAASPRTFAVLARRYVAAGMTRQAIRAFDDMEA FVSREPDAAEFATLLDTLCKYKYPKVATEVFNKRKYKYGPNEKMYSILIYGWCKVNRSDM AKKFLKDMLVHGIEPNIVTYNILLNGICRHASLHPDYRFDRTVHAAEDLLKEMRGRGIEP DVTSYSIILHVYSRAHKPELCLCMFRSMKERGICPTVATYTSVIKCLSSCGRLEDGEILL DEMVAEGVCPSPATYNCFLKEYRGRKDVTAALELYNKMKAPGSLTAPDIHTYNILLGMFS KLNRHGTVMDIWSDMCESTVGPDLDSYTLLIHCFCDSQKWREACQFFMEMIEKGFLPQKI TFETLYRGLIQADMLRTWRRLKRRVDEEAAKFGDEFKLYHMKPYKR

Transcript Sequence

Transcript ID	Zm00001d018219_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:216823300:216826617:1 gene:Zm00001d018219 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein mitochondrial
Sequence	GCTCGTTCCGTCTGACTGCCGTCGCTAGTTCTCCACCCCACCATGCCGCCGCCTCTCCCC GCCGCCGGCGGATCCGCCGCGCGCGCCATCGCCATTCGCATGCTTTCCACAAATACTGTG CCTGTCGAAGCCGCCTCCCTACCTCACACTCTCGCGTTGCCGCCCATCGCCCCATCCCCC GCCGCCGACGAGCTCGCGCGCCTCCTCCTCGCGCACCACAACCCCTTCCACCCGGCCGAG TCCCCGCTCCAGCTCCTCTCCGGCGGCGGCGTATCCCTCTCCGGGGACCTCCTGGTCCAG ATCCTCCTCCGCCTCCGTGGTGCGTCCAAGCTCGCGCTCTCGCTCCTCCACGCCGCGCGC CTCCACCCGTCCTTCGTCAACACGCAGCCCCGTTCCGACGCCTACGACGCCGTGGTCGAC GCCCTCGGCCGCGCGCGCCAGTTCGACGCCGCGTGGCGCGTCGTCGTGGACGCGTCGGCG GACGGCGCCGCTTCTCCACGCACGTTCGCGGTGCTGGCGAGGAGATACGTCGCCGCGGGT ATGACCAGACAAGCGATTCGCGCGTTCGACGACATGGAGGCGTTTGTCAGCAGGGAGCCT GATGCCGCTGAGTTTGCCACGCTGCTCGACACGCTATGCAAGTACAAGTACCCCAAGGTT GCTACAGAGGTATTTAATAAAAGGAAATACAAGTACGGGCCAAATGAAAAGATGTACTCT ATTTTAATTTATGGATGGTGCAAGGTGAATCGGAGTGACATGGCTAAGAAGTTCCTAAAA GATATGCTTGTTCATGGCATAGAACCAAACATTGTTACATACAACATCCTTCTAAATGGT ATCTGCAGGCATGCAAGCTTGCACCCTGATTACCGATTTGATAGAACAGTTCATGCAGCA GAGGATCTCTTGAAGGAGATGCGTGGCAGGGGAATTGAACCAGATGTAACCAGTTATTCA ATCATTCTGCATGTTTACAGTCGTGCACATAAACCTGAGTTGTGTCTCTGCATGTTCCGC TCGATGAAAGAAAGAGGCATTTGCCCCACAGTGGCAACATACACTTCTGTGATAAAGTGT CTTTCCTCTTGTGGGAGATTGGAAGATGGTGAAATTTTGCTTGATGAGATGGTTGCTGAG GGAGTATGTCCCTCCCCGGCTACCTACAATTGCTTCCTCAAGGAGTATCGGGGAAGAAAA GATGTGACTGCTGCCTTAGAACTGTATAATAAGATGAAGGCACCTGGTTCACTGACCGCA CCAGATATTCACACTTACAACATACTGCTGGGAATGTTCAGCAAGCTGAATCGACATGGA ACTGTTATGGACATTTGGAGTGATATGTGTGAAAGCACTGTGGGTCCTGATCTTGATTCA TACACTTTGTTGATCCATTGCTTTTGTGATAGTCAGAAGTGGAGGGAAGCATGTCAGTTC TTCATGGAGATGATCGAGAAAGGTTTTCTTCCCCAAAAGATCACCTTTGAGACACTGTAT CGTGGTCTAATACAAGCAGATATGCTGCGGACCTGGAGAAGGCTTAAGAGAAGGGTTGAT GAAGAAGCAGCAAAATTTGGCGATGAGTTCAAACTCTACCACATGAAGCCTTACAAGAGG TGACCATTCATGATTGGGGTGCTGTCATGAACACACTTGTCAGTTGTGACCAAGGACAAA ATTGATTTCTCAAAAATGAAACACATCATACCATCTTGAGCTCAATCTGTGGCAAGATAG TGGTGGAGGAACTGGAGCAGGGTCTCTGGTGATGAGAGCCGGAGGTGACGAGTGAGACAG CAGCTGGGCTCAACAAGGGGTCGCACAATGACAAAAAGTGTGTCCAGATCACTGACGGTG TCTGCAGCCTCGTTAACAAAAGAGTGCGCGTGCATCAAGGATGAGGCCCTGGTGCTGGAG GTGGCTTCAGTGTTGCTGTTGGTGCCATCATGCATTCATGCCTGTGCCCCCTCCCCTTGA TGCGAGGCGGGCACTGTCCCTGCATGAAGTTCCCACCAGCAACCAGACAGATCAAGACCG CAACCACCACGACTACTGCTACCTTTGACATGGTCTCTGTTCAATCTGCCGTCCACCTCA AACGGACTTCCCACACCACATCTGCAATTCCCATACTCCAAAACCAGCCAGTGCCAGGCC ATGCATGCAATTGCAGCCTCTCGACGCTGACAAGCACGGCCAGAGCCGCTGGAACCACTT CCCCGTTGGTAAATTAGAGGTCACCACCACGTTGTAAGGTACTACGGTTTTTGTCTTGAT GCCTTGGTGGATGGGTATGGGCTGACCGCTGACGTGGTGCCAACAAAGGCAACACTGGGA AGTGATATTTGTGAATTAGAGGTTCCGTGAATGGCACTACAATTTAGGTCATCCAGATTT TTGCTATAGTTGGGGAGAGGGGAATTAGACATTTTTTCCTTCATGTTGTAATCATATGTT TGTAACCTTGTTCTGCACCTTGCTAGAAAAACGGTAGT