Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d018214_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:5:216733539:216735329:-1 gene:Zm00001d018214 gene_biotype:protein_coding transcript_biotype:protein_coding description:O-Glycosyl hydrolases family 17 protein
Sequence

ATGGCGCCCCCACGCCCTCTCCTCGCCGCCGTCTTCCTCGCCGCGGCGGTTCTGCTCCTC
CTTTCTCCGGCAGAGGCGGGGACGGTGGGCGTGAACTACGGCCGCGTGGCGAACAACCTG
CCCAACCCAGCGGCGGTTGTGCAGCTGCTCAAGCAGCAGGGCGTCGCGCAGGTGAAGCTG
TACGACGCCGACCCCACCGTGCTGCGCGCCCTCGCGAACACCGGCATCAAGGTGGTGGTG
GCGCTGCCCAACGAGCAGGTCGCGGCGGCGGCGTCGCGCGCGTCCTACGCGCTGCTGTGG
GTGCGCCGGAACGTGGCGGCGTACCACCCGGCCACGCAGATCCAGGGCATCGCCGTGGGC
AACGAGGTGTTCGCGTCGGCCAAGAACGTGACGGCGCAGCTGGTCCCGGCCATGGCCAAC
GTGCACGCCGCGCTGGCCAGGCTGGGCCTCGACGGGGCCGTCAAGGTGTCGTCGCCCATC
GCGCTCACGGCGCTCGCGTCGTCCTACCCGTCCTCGGCGGGCGCGTTCCGGGAGGACCTC
GCGCAGGCCGTCATGAAGCCCATGCTCGACTTCCTGGCGCAGACCGGGTCGTACCTCATG
GTGAACGCGTACCCGTTCTTCGCTTACTCCGGCAATGCGGGAGACATCTCCCTCGACTAC
GCCCTGTTCCGCCCCAACGCCGGCGTGCTCGACGCCGGGAACGGCCTCAAGTACTACAGC
CTCCTCGACGCGCAGCTGGACGCCGTGTTCGCCGCGGTCAGCAGGCTCGGGGAGGGCTAC
AACGGCGTGCGCGTCGTGGTCTCCGAGACGGGGTGGCCGTCCAAGGGCGACGCCAACGAG
GCGGGCGCTTCGGCGGCCAACGCCGCGGCGTACAACGGCAACCTGGCCCGCCGCGTGCTC
TCCGGCAACGCCGGCACCCCGCGCCGCCCCGACGCCGACATCGACGTGTACCTCTTCGCG
CTCTTCAACGAGAACCAGAAGCCCGGGCCGACCTCCGAGCGCAACTACGGCGTCTTCTAC
CCGAACCAGCAGAAGGTGTACGACGTCGAGTTCGTCCTCGGCGGCGGCGGCGCCAGCCAG
GGCAACGGCGGCCTCGGGTGGCAGGAGAACGGCGGCGGGGCGAGCAGCACCAGCACCAAC
CCGCCGAGCGGGGTGAAGGTGACGACCGGGGAGGCGTGGTGCGTGGCGAACGCGATGGCC
GGGGAGCATCGGCTCCAGGCGGCGCTGGACTACGCGTGCGGCCCCGGCGGCGCGGACTGC
AAGGCCATCCAGCCCGGCGCGGCGTGCTTCGAGCCCAACACCATGGTCGCGCACGCATCC
TACGCCTTCAACGACTACTACCAGCGCAAGGGCCGGTCCATCGGAACCTGCGACTTCGCC
GGCGCCGCCTACGTCGTCAACCAGGCACCGAGTAAGCCGCTGCCGCGCCACTCATTCTCC
CCCTCGCGCCATTTTCGACGCAGCTAG

Peptide Sequence

PEP ID

Zm00001d018214_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:5:216733539:216735329:-1 gene:Zm00001d018214 transcript:Zm00001d018214_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:O-Glycosyl hydrolases family 17 protein
Sequence

MAPPRPLLAAVFLAAAVLLLLSPAEAGTVGVNYGRVANNLPNPAAVVQLLKQQGVAQVKL
YDADPTVLRALANTGIKVVVALPNEQVAAAASRASYALLWVRRNVAAYHPATQIQGIAVG
NEVFASAKNVTAQLVPAMANVHAALARLGLDGAVKVSSPIALTALASSYPSSAGAFREDL
AQAVMKPMLDFLAQTGSYLMVNAYPFFAYSGNAGDISLDYALFRPNAGVLDAGNGLKYYS
LLDAQLDAVFAAVSRLGEGYNGVRVVVSETGWPSKGDANEAGASAANAAAYNGNLARRVL
SGNAGTPRRPDADIDVYLFALFNENQKPGPTSERNYGVFYPNQQKVYDVEFVLGGGGASQ
GNGGLGWQENGGGASSTSTNPPSGVKVTTGEAWCVANAMAGEHRLQAALDYACGPGGADC
KAIQPGAACFEPNTMVAHASYAFNDYYQRKGRSIGTCDFAGAAYVVNQAPSKPLPRHSFS
PSRHFRRS

Transcript Sequence

Transcript ID

Zm00001d018214_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:5:216733539:216735329:-1 gene:Zm00001d018214 gene_biotype:protein_coding transcript_biotype:protein_coding description:O-Glycosyl hydrolases family 17 protein
Sequence

CGAGGTCACCGGCCATAAATCCCCAATCTCCGCGCTTTCCTTCCGCCCCACACTCGTCCA
CTCACCCCCTCTTTGCTCTGCCTCGCCGCGCCGCAGAGCAGAGCATGGCGCCCCCACGCC
CTCTCCTCGCCGCCGTCTTCCTCGCCGCGGCGGTTCTGCTCCTCCTTTCTCCGGCAGAGG
CGGGGACGGTGGGCGTGAACTACGGCCGCGTGGCGAACAACCTGCCCAACCCAGCGGCGG
TTGTGCAGCTGCTCAAGCAGCAGGGCGTCGCGCAGGTGAAGCTGTACGACGCCGACCCCA
CCGTGCTGCGCGCCCTCGCGAACACCGGCATCAAGGTGGTGGTGGCGCTGCCCAACGAGC
AGGTCGCGGCGGCGGCGTCGCGCGCGTCCTACGCGCTGCTGTGGGTGCGCCGGAACGTGG
CGGCGTACCACCCGGCCACGCAGATCCAGGGCATCGCCGTGGGCAACGAGGTGTTCGCGT
CGGCCAAGAACGTGACGGCGCAGCTGGTCCCGGCCATGGCCAACGTGCACGCCGCGCTGG
CCAGGCTGGGCCTCGACGGGGCCGTCAAGGTGTCGTCGCCCATCGCGCTCACGGCGCTCG
CGTCGTCCTACCCGTCCTCGGCGGGCGCGTTCCGGGAGGACCTCGCGCAGGCCGTCATGA
AGCCCATGCTCGACTTCCTGGCGCAGACCGGGTCGTACCTCATGGTGAACGCGTACCCGT
TCTTCGCTTACTCCGGCAATGCGGGAGACATCTCCCTCGACTACGCCCTGTTCCGCCCCA
ACGCCGGCGTGCTCGACGCCGGGAACGGCCTCAAGTACTACAGCCTCCTCGACGCGCAGC
TGGACGCCGTGTTCGCCGCGGTCAGCAGGCTCGGGGAGGGCTACAACGGCGTGCGCGTCG
TGGTCTCCGAGACGGGGTGGCCGTCCAAGGGCGACGCCAACGAGGCGGGCGCTTCGGCGG
CCAACGCCGCGGCGTACAACGGCAACCTGGCCCGCCGCGTGCTCTCCGGCAACGCCGGCA
CCCCGCGCCGCCCCGACGCCGACATCGACGTGTACCTCTTCGCGCTCTTCAACGAGAACC
AGAAGCCCGGGCCGACCTCCGAGCGCAACTACGGCGTCTTCTACCCGAACCAGCAGAAGG
TGTACGACGTCGAGTTCGTCCTCGGCGGCGGCGGCGCCAGCCAGGGCAACGGCGGCCTCG
GGTGGCAGGAGAACGGCGGCGGGGCGAGCAGCACCAGCACCAACCCGCCGAGCGGGGTGA
AGGTGACGACCGGGGAGGCGTGGTGCGTGGCGAACGCGATGGCCGGGGAGCATCGGCTCC
AGGCGGCGCTGGACTACGCGTGCGGCCCCGGCGGCGCGGACTGCAAGGCCATCCAGCCCG
GCGCGGCGTGCTTCGAGCCCAACACCATGGTCGCGCACGCATCCTACGCCTTCAACGACT
ACTACCAGCGCAAGGGCCGGTCCATCGGAACCTGCGACTTCGCCGGCGCCGCCTACGTCG
TCAACCAGGCACCGAGTAAGCCGCTGCCGCGCCACTCATTCTCCCCCTCGCGCCATTTTC
GACGCAGCTAGAAATCGGCCATTATATTCATCGCGATCACATTCGCGCATCTGGTACCAT
TGGTTGAAACGTAGACCATGAATTCGTTGGATCACGTAGCGAAATGTAAATGCTGGCATG
CTGCCACTGCAATGT