Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d018209_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:5:216610165:216612671:-1 gene:Zm00001d018209 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tyrosine specific protein phosphatase family protein

Sequence

ATGACCATGAAGCTGGATGTCCCGGCGAGGCAGAAGAGCCAGGACGCAGAGCAGAACGGC
AGGACAGCGGCCGCGGGCGTCCTCGGCATTGACGAGCCGTGGAGCCAGCCGAAACTCCGT
CACCCCGGCGACGCGCAGGCCGACGCCGACGCCCTGGTGCCGCCGCTCAACTTCGCCATG
GTCGACGACGGCATCTTCCGCTCGGGCCTCCCGGACGCCGGCAGCTTCCGCTTCCTGCTC
TCCCTCAATCTGCGCTCCGTCGTGTACCTGTGCCCGGAGCCGTACCCGGAGGAGAACGCG
CGGTTCCTGCAGCAGAACGGGATCCAGCTTCACCAGTTCGGCATCGAAGGGAGCAAGCAT
CGCACTGGCTGCGTCGTCGGGTGCCTGAGGAAGCTGCAGAAGTGGTGCCTGTCTTCGGTG
TTCGACGAGTACCTGCACTTCGCGGCGGCGAAGGCGAGGAGCACTGACCAGAGGTTCATG
GAGCTGTTCGATGCTTCGAGCTTGACGCACCTGGCGGCCTCATAG

Peptide Sequence

PEP ID

Zm00001d018209_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:5:216610165:216612671:-1 gene:Zm00001d018209 transcript:Zm00001d018209_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tyrosine specific protein phosphatase family protein

Sequence

MTMKLDVPARQKSQDAEQNGRTAAAGVLGIDEPWSQPKLRHPGDAQADADALVPPLNFAM
VDDGIFRSGLPDAGSFRFLLSLNLRSVVYLCPEPYPEENARFLQQNGIQLHQFGIEGSKH
RTGCVVGCLRKLQKWCLSSVFDEYLHFAAAKARSTDQRFMELFDASSLTHLAAS

Transcript Sequence

Transcript ID

Zm00001d018209_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:5:216610165:216612671:-1 gene:Zm00001d018209 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tyrosine specific protein phosphatase family protein

Sequence

ATCTACACACGCCCTTCCCAAGTCCCAACCGAACACACAGAGCACAGCAACAGCGGCCAC
CTGCCGCTCAGTGCGTGCCATGACCATGAAGCTGGATGTCCCGGCGAGGCAGAAGAGCCA
GGACGCAGAGCAGAACGGCAGGACAGCGGCCGCGGGCGTCCTCGGCATTGACGAGCCGTG
GAGCCAGCCGAAACTCCGTCACCCCGGCGACGCGCAGGCCGACGCCGACGCCCTGGTGCC
GCCGCTCAACTTCGCCATGGTCGACGACGGCATCTTCCGCTCGGGCCTCCCGGACGCCGG
CAGCTTCCGCTTCCTGCTCTCCCTCAATCTGCGCTCCGTCGTGTACCTGTGCCCGGAGCC
GTACCCGGAGGAGAACGCGCGGTTCCTGCAGCAGAACGGGATCCAGCTTCACCAGTTCGG
CATCGAAGGGAGCAAGCATCGCACTGGCTGCGTCGTCGGGTGCCTGAGGAAGCTGCAGAA
GTGGTGCCTGTCTTCGGTGTTCGACGAGTACCTGCACTTCGCGGCGGCGAAGGCGAGGAG
CACTGACCAGAGGTTCATGGAGCTGTTCGATGCTTCGAGCTTGACGCACCTGGCGGCCTC
ATAGTCACAGTATTGAGCGCTGACCAGAGCGAGTGGCTCCCGACCGGTCCCGATCCTGCA
ACCATGCTGCATCAAGCAAGCGATTTTCCCCTGCTGTTTCCGAAGCAACTCGGCCGAGAA
TAATGCTGCTGGAACCATGAGTGTGTCCGCGAGAATTGATAGGCAATGGCCTTAGGTTTT
GTTGTGTGAGTGCTGTGGTTGCTTCGTGTGCAACTGATTTCAGATTCTGAATTGGTGATG
GCTGTGATTGGTGATGGCTGAA