Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d018201_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:5:216450178:216453807:-1 gene:Zm00001d018201 gene_biotype:protein_coding transcript_biotype:protein_coding description:LysM domain-containing GPI-anchored protein 1
Sequence

ATGGCGGCGGAGTCGCGTGGCTTCGTGATGGCGGCTGTGATGGTGGTGGCGGCGGTGGTG
GCCGTGGTATCGGTGGCGCCGTGCGGCGCGGAGGCGAAGACGACGATCGAGCCGTGCTCG
GGGTCCGACTCCTGCCCGGCGCTGCTGGGCTACACGCTCTACGCCGACATGAAGGTGTCC
GAGGTGGCCGCGCTCTTCGCCGTCGACCCGGCGGCGTTGCTGGCCGCCAACGCGCTCGAC
TTCGGCGCGCCAGGGGCGGCGCACCGCATCCTGCCCATGGGCCTCTTCGTGCGCGTGCCC
ACCCGCTGCTCCTGCGCCGACGGCGTCCGCAAGTCCGTCTCCGTCCGCTACGCCGCGCGC
CCGGCCGACACGCTCGCCACCGTCTCCGACGTCGTCTTCGCGGGGCTCGCCTCCTCCGAC
CAGATCCGCAACGAGAACGGCCTCACCTCCGCCGACCCCGACGCGCCGCTGGACGCCGGC
CAGAAGCTCGCCATCCCGCTGCCATGCGTCTGCTTCAACTCGTCCGACAACAACCTCCCC
GCGGTGTACCTCTCCTACGTCGTGCAGGTCGGGGACACCGTGCCCGCCATCGCTGCAAGC
TACGAGACCACCGTCACGGATGTCATGAATGTCAATGCCATGGGGAGTCCCGTCGCCGCG
CCAGGCGACATTCTCGCCATCCCATTGCCAGCATGTGCATCTACATTTCCAAAATCCGCA
TCAGACCACGGACTGATTGTATCAAACGGAACTTACGCGCTTACCGCTAGCAACTGTGTG
CAGTGTAGCTGTGGACCTGGCAGCCTCAATCTATATTGCACGCCAACTTCACTGTCGGGA
ACCTGTCCTAGTATGCAATGTCCTAACAGCGACGTGATGCTTGGCAATGTGAGCACCCAT
CCAACCGGTGCTGGATGCAACGTCTCTGCTTGCAGCTACGGAGGTTTTGTTAATGGAACT
ATAACAGCTTCGCTAACCGCAGGTCTCCAAGCCAGATGCCCAGGACCACGCCAGTTTCCC
GCACTGACGGAACCACCTACCACGGTGAGCCACGACTCAACGTACCTTCCTCCGTTATCA
GCGCCTGGGCCAGCGGAAGCTGGTGGCGTCATGCCTGAACCAGGCTCGCCAGGGCCAGGC
GCCTCGGTGCAAGCAGGGCCCTTCACGCTCCCGAAAGTGTCTAAGGCCAATGGCCCCGCT
GGCAGCGTTTCAGCAGCTCCGTTGGTGGGTAAACCACTTCGAATCCTACCCGTCCTGGTC
TCCTGCCTAGCTTTCTACTTGCAGCTCTGA

Peptide Sequence

PEP ID

Zm00001d018201_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:5:216450178:216453807:-1 gene:Zm00001d018201 transcript:Zm00001d018201_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:LysM domain-containing GPI-anchored protein 1
Sequence

MAAESRGFVMAAVMVVAAVVAVVSVAPCGAEAKTTIEPCSGSDSCPALLGYTLYADMKVS
EVAALFAVDPAALLAANALDFGAPGAAHRILPMGLFVRVPTRCSCADGVRKSVSVRYAAR
PADTLATVSDVVFAGLASSDQIRNENGLTSADPDAPLDAGQKLAIPLPCVCFNSSDNNLP
AVYLSYVVQVGDTVPAIAASYETTVTDVMNVNAMGSPVAAPGDILAIPLPACASTFPKSA
SDHGLIVSNGTYALTASNCVQCSCGPGSLNLYCTPTSLSGTCPSMQCPNSDVMLGNVSTH
PTGAGCNVSACSYGGFVNGTITASLTAGLQARCPGPRQFPALTEPPTTVSHDSTYLPPLS
APGPAEAGGVMPEPGSPGPGASVQAGPFTLPKVSKANGPAGSVSAAPLVGKPLRILPVLV
SCLAFYLQL

Transcript Sequence

Transcript ID

Zm00001d018201_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:5:216450178:216453807:-1 gene:Zm00001d018201 gene_biotype:protein_coding transcript_biotype:protein_coding description:LysM domain-containing GPI-anchored protein 1
Sequence

CCGACGCATCCTTTGCGACGTCTGGCTGGCATGATGGCCCCACACCAGCTTACATACCAC
GCCTCTCGGCTCTCTGTCTCTCCCTCGACCAGAGGCGGAGAGCACTATAGTCACGAGCTC
CACAGTCCAAGCTCGCACTCGCAAGTGCTAGCATCTCTCGGGAATGGCGGCGGAGTCGCG
TGGCTTCGTGATGGCGGCTGTGATGGTGGTGGCGGCGGTGGTGGCCGTGGTATCGGTGGC
GCCGTGCGGCGCGGAGGCGAAGACGACGATCGAGCCGTGCTCGGGGTCCGACTCCTGCCC
GGCGCTGCTGGGCTACACGCTCTACGCCGACATGAAGGTGTCCGAGGTGGCCGCGCTCTT
CGCCGTCGACCCGGCGGCGTTGCTGGCCGCCAACGCGCTCGACTTCGGCGCGCCAGGGGC
GGCGCACCGCATCCTGCCCATGGGCCTCTTCGTGCGCGTGCCCACCCGCTGCTCCTGCGC
CGACGGCGTCCGCAAGTCCGTCTCCGTCCGCTACGCCGCGCGCCCGGCCGACACGCTCGC
CACCGTCTCCGACGTCGTCTTCGCGGGGCTCGCCTCCTCCGACCAGATCCGCAACGAGAA
CGGCCTCACCTCCGCCGACCCCGACGCGCCGCTGGACGCCGGCCAGAAGCTCGCCATCCC
GCTGCCATGCGTCTGCTTCAACTCGTCCGACAACAACCTCCCCGCGGTGTACCTCTCCTA
CGTCGTGCAGGTCGGGGACACCGTGCCCGCCATCGCTGCAAGCTACGAGACCACCGTCAC
GGATGTCATGAATGTCAATGCCATGGGGAGTCCCGTCGCCGCGCCAGGCGACATTCTCGC
CATCCCATTGCCAGCATGTGCATCTACATTTCCAAAATCCGCATCAGACCACGGACTGAT
TGTATCAAACGGAACTTACGCGCTTACCGCTAGCAACTGTGTGCAGTGTAGCTGTGGACC
TGGCAGCCTCAATCTATATTGCACGCCAACTTCACTGTCGGGAACCTGTCCTAGTATGCA
ATGTCCTAACAGCGACGTGATGCTTGGCAATGTGAGCACCCATCCAACCGGTGCTGGATG
CAACGTCTCTGCTTGCAGCTACGGAGGTTTTGTTAATGGAACTATAACAGCTTCGCTAAC
CGCAGGTCTCCAAGCCAGATGCCCAGGACCACGCCAGTTTCCCGCACTGACGGAACCACC
TACCACGGTGAGCCACGACTCAACGTACCTTCCTCCGTTATCAGCGCCTGGGCCAGCGGA
AGCTGGTGGCGTCATGCCTGAACCAGGCTCGCCAGGGCCAGGCGCCTCGGTGCAAGCAGG
GCCCTTCACGCTCCCGAAAGTGTCTAAGGCCAATGGCCCCGCTGGCAGCGTTTCAGCAGC
TCCGTTGGTGGGTAAACCACTTCGAATCCTACCCGTCCTGGTCTCCTGCCTAGCTTTCTA
CTTGCAGCTCTGATCGAGTGAACCCACGTCGCGATGAATTCTCGTAGTATGCTTTTGAAG
CACCAAAGGGACATCATTGCTCGATCAAACTCTCTCTGAGTTGTTGTTCTAGCTTTGTTT
CGCGAAATCTCCCCGGCAAAACTGCGCGCCTAAACAGCGTATCTGATGATGTGTTCGCTG
CTTTTGTACAAAAAAAGATATGGCCCTATTGTGATGTGTAAAGCAGTAAAGTGGTAGCTA
TTGTTCTTC