Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d018199_T067
CDS Infomation	cds chromosome:B73_RefGen_v4:5:216408847:216415941:1 gene:Zm00001d018199 gene_biotype:protein_coding transcript_biotype:protein_coding description:PHD finger family protein
Sequence	ATGCATGGCGCTCAAGGAAATGTTTGTAAAGGGAGCTCAGGGGTGGTGCAAGATAACAAA TCAGATGGATTGGACACCACAGATACTGTTGATGTGAAAAATGCATTGGTCCTAGATGAT GACAAGGGTGTACTTGTTGATGTGCCGGATTTCGCTGTAACTGAACCTGCACGAACAAGA TCTAAAAGCAACAGCAAGATACTGAAAGAAAATAATGCAACATGCGCAACAGGTGTGACT ATTGTGCAAAATGGAGAAAAGAACATGGTTAAAGAAGATTCTAATCCCGAGTGTGCTGCT AAAGAATTTGCAAACGAATCTACTCAGGGGTTTTCTCCAAGCAGCAGCAAGGATGTTTTA AAGGACGAACATGGAATATTGATACTGAACGACACCTCTGGAAACAAAGAATCTGGTACC TCCACACAGATACCAAATGAAAAGCAAGGTGCATTACTTGGAAGAAAAAATAATGACTTA ACTGAGGTCGAACTGGGTCCATGCTTAGAGAAAGGAGTACCTTCACATGGCCATTGTTTT GTTCAGGGTGATAATGGTGTAGATGGGGTAGGTTCAGTTGAAAATAGCTTCAACACTTCA AATTGCTCTCATGGACAACCTTTTTTCAACTTTGATGATTCACATTCTTATATTCACCCA TTCATTAAGAAAAAGGTATCTCATCATTGGGACATTACTTTCAATCAGAATAAGGAAACT CTGAATCACTATATACAAGAGTCATCATATCCTTCACATGAGAAAATACCAACTGATTCC TTGGTAGAAGTAGAGAGTACAGCAGATACAACCGTGACAGATCAAGTTTTGAAAGCAAGG TCTTCAAAAATTCTTGAGCATTCACCTGATGATGAAGTTGAAGGAGAGATGGTGTACTTA CAATCTAGGCTGCTTGACAATGCTGTTGTTCTGAAGCACAGATATGAAAAATTGATAGCA AAGGTTGTCCAAAATCTTTGTCGCGAGCTGGATGCTTTCAGTAAAAGAAAATGGGATCTT ATCTTTGTGAATCAGTTTCTTCGTGATGTTAGAGAAGCTAAAAAACGTGGGAGAAAAGAA AAGAGACATAAGGAAGCCCAAGCTGTACTAGCTGCAGCTGCAGCTGCTATTGCATCCTCC TCACGGAACTCAACTGTGAGAAAAGATGCAAAGGAGAATGCACCAGAGAGTTCTCCAAAA CTTGTTGCTGGATCTTCAAGGGTTGGTCAACGGACTTTTTCATTGCCACGGATTAATGAT TCATCAAAGTCATCCAACAACAAAGTATCATCAGATAACAAATTTGGAAGTTTTCATATG CCAATTTCTTCAAAAGAAAATGGGCTATACTGTGATGTATGCATGCGAACTGAAACTCTG TTGAACCGAATATTTGTCTGCTCCAGATGCAAGGCTGCTGTGCACATAGATTGCTACAGA AATCTGGAAAATTCTATTGGGCCCTGGAACTGCGAACTTTGTGAAGATGAAGACATTTCA TCAGAAGCTACAAGTACAACCGTTAGTGATAAATCACATTGTAATGGCAAGTTACCCTTT GCACAGTGTGGCATGTGCCATGGCACATCAGGTGCTTTTAGAAAGACTGTAGATGGGAAG TGGGTTCATGCTTTCTGTGCTGAGTGGTTGTTGGATACCAAGTATGTAAGGGGACAAGAT AGCCCTGTAGAAGGAATGGAAAACCTTGTAGAGGGAAAAGACACTTGTTGTCTCTGCCTC TGCAATGTTGGCATGTGCTTAAGGTGTAGTAGTGGGGATTGCAACATTACTTTCCATCCT ACTTGCGCTAGAAGTTCTGGTTTATACATGAACACGAAAGGGTTTGGTACTACATCACAG CACAAAGCATACTGTGACAAACACAGCGTAGAACAGAAAGAGGCTGATGCACAGCAATAT GGACCTGAGGAGCTCAGGAGCATGAAACGAATGAGGTATCAGATGCAAGAGCTCATTACT CACTGCCACTTATGA

Peptide Sequence

PEP ID	Zm00001d018199_P067
PEP Infomation	pep chromosome:B73_RefGen_v4:5:216408847:216415941:1 gene:Zm00001d018199 transcript:Zm00001d018199_T067 gene_biotype:protein_coding transcript_biotype:protein_coding description:PHD finger family protein
Sequence	MHGAQGNVCKGSSGVVQDNKSDGLDTTDTVDVKNALVLDDDKGVLVDVPDFAVTEPARTR SKSNSKILKENNATCATGVTIVQNGEKNMVKEDSNPECAAKEFANESTQGFSPSSSKDVL KDEHGILILNDTSGNKESGTSTQIPNEKQGALLGRKNNDLTEVELGPCLEKGVPSHGHCF VQGDNGVDGVGSVENSFNTSNCSHGQPFFNFDDSHSYIHPFIKKKVSHHWDITFNQNKET LNHYIQESSYPSHEKIPTDSLVEVESTADTTVTDQVLKARSSKILEHSPDDEVEGEMVYL QSRLLDNAVVLKHRYEKLIAKVVQNLCRELDAFSKRKWDLIFVNQFLRDVREAKKRGRKE KRHKEAQAVLAAAAAAIASSSRNSTVRKDAKENAPESSPKLVAGSSRVGQRTFSLPRIND SSKSSNNKVSSDNKFGSFHMPISSKENGLYCDVCMRTETLLNRIFVCSRCKAAVHIDCYR NLENSIGPWNCELCEDEDISSEATSTTVSDKSHCNGKLPFAQCGMCHGTSGAFRKTVDGK WVHAFCAEWLLDTKYVRGQDSPVEGMENLVEGKDTCCLCLCNVGMCLRCSSGDCNITFHP TCARSSGLYMNTKGFGTTSQHKAYCDKHSVEQKEADAQQYGPEELRSMKRMRYQMQELIT HCHL

Transcript Sequence

Transcript ID	Zm00001d018199_T067
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:216408847:216415941:1 gene:Zm00001d018199 gene_biotype:protein_coding transcript_biotype:protein_coding description:PHD finger family protein
Sequence	GAATTACCTTTCTAACCATGGCGAAGCAAAAACATTAATATCTGCACTGGTTTGGCAGCT AATTGACAGTGGAAAAGTTAGTGTTAGTGATGTAGCATCTGAAGTCGGTATTTCTTCGGA ATCCTTGGAAGCTGCTCTTGTGGGTGAAACTACCACGTTTTCCCATGGTTTGACGCTGAA AATTATCAAGTGGCTCCAAAATTCTGTGCATATGCATGGCGCTCAAGGAAATGTTTGTAA AGGGAGCTCAGGGGTGGTGCAAGATAACAAATCAGATGGATTGGACACCACAGATACTGT TGATGTGAAAAATGCATTGGTCCTAGATGATGACAAGGGTGTACTTGTTGATGTGCCGGA TTTCGCTGTAACTGAACCTGCACGAACAAGATCTAAAAGCAACAGCAAGATACTGAAAGA AAATAATGCAACATGCGCAACAGGTGTGACTATTGTGCAAAATGGAGAAAAGAACATGGT TAAAGAAGATTCTAATCCCGAGTGTGCTGCTAAAGAATTTGCAAACGAATCTACTCAGGG GTTTTCTCCAAGCAGCAGCAAGGATGTTTTAAAGGACGAACATGGAATATTGATACTGAA CGACACCTCTGGAAACAAAGAATCTGGTACCTCCACACAGATACCAAATGAAAAGCAAGG TGCATTACTTGGAAGAAAAAATAATGACTTAACTGAGGTCGAACTGGGTCCATGCTTAGA GAAAGGAGTACCTTCACATGGCCATTGTTTTGTTCAGGGTGATAATGGTGTAGATGGGGT AGGTTCAGTTGAAAATAGCTTCAACACTTCAAATTGCTCTCATGGACAACCTTTTTTCAA CTTTGATGATTCACATTCTTATATTCACCCATTCATTAAGAAAAAGGTATCTCATCATTG GGACATTACTTTCAATCAGAATAAGGAAACTCTGAATCACTATATACAAGAGTCATCATA TCCTTCACATGAGAAAATACCAACTGATTCCTTGGTAGAAGTAGAGAGTACAGCAGATAC AACCGTGACAGATCAAGTTTTGAAAGCAAGGTCTTCAAAAATTCTTGAGCATTCACCTGA TGATGAAGTTGAAGGAGAGATGGTGTACTTACAATCTAGGCTGCTTGACAATGCTGTTGT TCTGAAGCACAGATATGAAAAATTGATAGCAAAGGTTGTCCAAAATCTTTGTCGCGAGCT GGATGCTTTCAGTAAAAGAAAATGGGATCTTATCTTTGTGAATCAGTTTCTTCGTGATGT TAGAGAAGCTAAAAAACGTGGGAGAAAAGAAAAGAGACATAAGGAAGCCCAAGCTGTACT AGCTGCAGCTGCAGCTGCTATTGCATCCTCCTCACGGAACTCAACTGTGAGAAAAGATGC AAAGGAGAATGCACCAGAGAGTTCTCCAAAACTTGTTGCTGGATCTTCAAGGGTTGGTCA ACGGACTTTTTCATTGCCACGGATTAATGATTCATCAAAGTCATCCAACAACAAAGTATC ATCAGATAACAAATTTGGAAGTTTTCATATGCCAATTTCTTCAAAAGAAAATGGGCTATA CTGTGATGTATGCATGCGAACTGAAACTCTGTTGAACCGAATATTTGTCTGCTCCAGATG CAAGGCTGCTGTGCACATAGATTGCTACAGAAATCTGGAAAATTCTATTGGGCCCTGGAA CTGCGAACTTTGTGAAGATGAAGACATTTCATCAGAAGCTACAAGTACAACCGTTAGTGA TAAATCACATTGTAATGGCAAGTTACCCTTTGCACAGTGTGGCATGTGCCATGGCACATC AGGTGCTTTTAGAAAGACTGTAGATGGGAAGTGGGTTCATGCTTTCTGTGCTGAGTGGTT GTTGGATACCAAGTATGTAAGGGGACAAGATAGCCCTGTAGAAGGAATGGAAAACCTTGT AGAGGGAAAAGACACTTGTTGTCTCTGCCTCTGCAATGTTGGCATGTGCTTAAGGTGTAG TAGTGGGGATTGCAACATTACTTTCCATCCTACTTGCGCTAGAAGTTCTGGTTTATACAT GAACACGAAAGGGTTTGGTACTACATCACAGCACAAAGCATACTGTGACAAACACAGCGT AGAACAGAAAGAGGCTGATGCACAGCAATATGGACCTGAGGAGCTCAGGAGCATGAAACG AATGAGGTATCAGATGCAAGAGCTCATTACTCACTGCCACTTATGAAGAGATCAGTCTGA AACCAACAAATTATCTTTAGCTACCTTGTGAAAACTCTGTGGTTTGCTTGTATCATTCGA GTTAGCTATTTACAGTTTTGGGAATACATTATGCTGCCACAGCACTTCATGGGGCAGAAC TCATCAGTCATTATTCATAGAGGAAACAATATATTTAGGAATTGTTTTTCTTATGCAACC AACCTTGTGCATTCCTGACTTCCCGTACTCATGTTCCATGCAGTACATGTTTATTTGGAT GTTATT