Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d018195_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:5:216248474:216251073:-1 gene:Zm00001d018195 gene_biotype:protein_coding transcript_biotype:protein_coding description:WAT1-related protein

Sequence

ATGGGCGTGGGAAAAGTTCTGAACGACGTGAAGCCGTACCTGGCCATGGTCCTGCTGCAG
GTAGGCTTCGCCGGGATGTACATCGTGGCCGTGGCCTCGCTCAAGCGCGGGATGAGCCAC
TTCGTCCTCGTCGTGTACCGTAACCTCTGCGCCACCGCCGTCATGGCGCCATTCGCGCTC
TGGTTCGAGAGGAACGCGAGGCCAAGGATGACCATCACCATCTTCCTCAAGATAATGGGG
CTCGCCATCGTAATCGCCTGCGTCTGCTGGTCCGCCTTCTTCGTGCTCCAGGCCAACACG
CTCAAGAGCTACCCCGCGGAGCTGTCGCTGACGGCGCTCATCTGCCTCATGGGGTCGCTC
ATGAGCGGCTCCGTCGCGCTCGTCGCCGAGCGCCGCAACACCCAGGCCTGGGTCATCGGC
TTCGACACCCGCCTCTTCACCGCCGTCTACGCCGGCATAGTGTGCTCCGGCGTGGCATAC
TACGTGCAAGGCATCGTGTCCAGGCAACGAGGCCCGGTGTTCGTCACGGCCTTCAACCCT
CTCTGCATGATCATCACCGCCGTCATGGGCTCCATCATACTCAAAGAAGAGATCACTCTC
GGAAGCGTGATTGGCGCTGCGATCATCGTGTTAGGCCTGTACGCGCTCATCTGGGGCAAG
AGCAAGGACAGCGTGGCCGACGTCTCAGCATCAGGCGGCTCCAAGGGCGCATCAGCGGCT
GCCGCCGTCGAGCTGCCCATCACCTTGGCGCAGCCCAACGGCAACGGCAACTGCAAGCAC
GAGGTCGGCAGCGGCCGCGGCGTCGTCTTCGACGTCGAGACGCCGGCGGCCAACAACGGC
CATTACTAG

Peptide Sequence

PEP ID

Zm00001d018195_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:5:216248474:216251073:-1 gene:Zm00001d018195 transcript:Zm00001d018195_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:WAT1-related protein

Sequence

MGVGKVLNDVKPYLAMVLLQVGFAGMYIVAVASLKRGMSHFVLVVYRNLCATAVMAPFAL
WFERNARPRMTITIFLKIMGLAIVIACVCWSAFFVLQANTLKSYPAELSLTALICLMGSL
MSGSVALVAERRNTQAWVIGFDTRLFTAVYAGIVCSGVAYYVQGIVSRQRGPVFVTAFNP
LCMIITAVMGSIILKEEITLGSVIGAAIIVLGLYALIWGKSKDSVADVSASGGSKGASAA
AAVELPITLAQPNGNGNCKHEVGSGRGVVFDVETPAANNGHY

Transcript Sequence

Transcript ID

Zm00001d018195_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:5:216248474:216251073:-1 gene:Zm00001d018195 gene_biotype:protein_coding transcript_biotype:protein_coding description:WAT1-related protein

Sequence

ACTGCCATAGCTAGCTACTAGCTGAGGACCTCGGTCGAGGTAGTATAGTTACTTATTAGC
CATTAGCAGCTGGAACTTGTTGGAGGAGAGAGCTTAGCTTTGAGAGATAAAATGGGCGTG
GGAAAAGTTCTGAACGACGTGAAGCCGTACCTGGCCATGGTCCTGCTGCAGGTAGGCTTC
GCCGGGATGTACATCGTGGCCGTGGCCTCGCTCAAGCGCGGGATGAGCCACTTCGTCCTC
GTCGTGTACCGTAACCTCTGCGCCACCGCCGTCATGGCGCCATTCGCGCTCTGGTTCGAG
AGGAACGCGAGGCCAAGGATGACCATCACCATCTTCCTCAAGATAATGGGGCTCGCCATC
GTAATCGCCTGCGTCTGCTGGTCCGCCTTCTTCGTGCTCCAGGCCAACACGCTCAAGAGC
TACCCCGCGGAGCTGTCGCTGACGGCGCTCATCTGCCTCATGGGGTCGCTCATGAGCGGC
TCCGTCGCGCTCGTCGCCGAGCGCCGCAACACCCAGGCCTGGGTCATCGGCTTCGACACC
CGCCTCTTCACCGCCGTCTACGCCGGCATAGTGTGCTCCGGCGTGGCATACTACGTGCAA
GGCATCGTGTCCAGGCAACGAGGCCCGGTGTTCGTCACGGCCTTCAACCCTCTCTGCATG
ATCATCACCGCCGTCATGGGCTCCATCATACTCAAAGAAGAGATCACTCTCGGAAGCGTG
ATTGGCGCTGCGATCATCGTGTTAGGCCTGTACGCGCTCATCTGGGGCAAGAGCAAGGAC
AGCGTGGCCGACGTCTCAGCATCAGGCGGCTCCAAGGGCGCATCAGCGGCTGCCGCCGTC
GAGCTGCCCATCACCTTGGCGCAGCCCAACGGCAACGGCAACTGCAAGCACGAGGTCGGC
AGCGGCCGCGGCGTCGTCTTCGACGTCGAGACGCCGGCGGCCAACAACGGCCATTACTAG
TAGCTACAGCTAGTATATCTATCTATCTACTACTCCTAAACCTAAATCAACCTGCCCGGC
CGTCAGTTGTAGCTATAGACACTGACACACGCAGATAGAAGCGTCCTGCCGCAGGTTATA
TATGGCTGATCGAGTGGACGTGGACGCACTGCACATACATATGCCGTGCGATTTTTTGTT
TGTTTTCCGTTTTTGTTAATTATTAATTTCGCC