Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d018147_T002
CDS Infomation	cds chromosome:B73_RefGen_v4:5:215514653:215519823:1 gene:Zm00001d018147 gene_biotype:protein_coding transcript_biotype:protein_coding description:Phenylalanine--tRNA ligase alpha subunit cytoplasmic
Sequence	ATGGCGGAGAAGTCGCCGGCAGCCGACGTGGAAGCCGGTCTCCTTGCCCACCTCAACTCA GCGGGAGAGGTCCCCGACTCACGCTCTTTCGCTTCCTCCCTCGGCGTCTCCCACCTCGAA CTTGAGGGCGTCATCAAGAGCCTCTCAGCTTTCCGCATCGTCGACAGCACAGACATCATC AAGGAGACATGGGTGCTCACCGAGGAGGCCAAGGGCTACGCCGCCAAGGGCTCCCCCGAG GCACAGCTCGTCGCCGCAATTTCACCGGAGGGTGCCTCTAAGGACGCACTCAAGGCAATA TTGGGAGATGCTTTCGATGTTGGCATGAAGGCAGCCGCGAGGAACAAGTGGATAGGTTTC GAGAAGGGGAATAAGGACTTAGTCCTTAGGAAGGTTGAGAGCGTAAAGGATGAGCTGCAA GAGCAGCTTAGAAGACTAGAGAATGGGGAGGTTGTTTCTGATAAAGTGATCGATGATTTG AAGAGAAGGAAACTTATTACGAAAGAGAAATCAATTTGGTACTCTCTAAAGAAGGGGTCT GAGTTTGTTGTAAAGAGAAAAACGTTGGCTACTGATGTGACAACAGAACACCTTAGGAGT GGTGACTGGAAGGACCTTGAATTCAAAGACTATAATTATGGAGCTCAAGGTCAACCTATA GCCAAAGGTTATGTTCAGCCTTTGATGGAGGTTCGTGAGGCAATCGAGAACATCTTTATT ATGATGGGATTCACTGAGATGCCAACCAACAATTTCGTCGAAAGCAGCTTCTGGAATTTC GATGCACTGTTTCAGCCTCAACAGCATCCTGCTCGGGATTCACATGATACATTTTTCCTG AAAGCTCCAGCAACTACAAAACAGTTGCCTGACGACTATCTTGAGAAAGTAAAGCAAGTT CATCAGTCTGGCGGTTATGGCTCCAAAGGATATGGTTATGATTGGAAACGGGATGAAGCG GAGAAGAATCTTCTCCGTACTCATACAACTGCTGTTTCCACGAGAATGTTATACAAGCTT GCTCAGGAGAAACCTTTTACTCCAAAGAGGTATTACTCCATTGATCGTGTTTTCCGCAAT GAAGCTGTTGACCGGACTCATCTTGCTGAATTCCACCAGATAGAGGGACTTATCTGTGAT TATGGTTTGACACTTGGTGATCTGATTGGTGTATTGGAGGATTTCTTCTCAAGTCTAGGC ATGTCCAAGCTGCGTTTCAAGCCTGCCTACAATCCATATACTGAACCCAGCATGGAAATT TTCAGTTACCATGATGGTTTGAAGAAATGGGTGGAAGTTGGTAATTCAGGCATGTTCAGG CCAGAGATGTTGCTTCCCATGGGACTGCCAGAAGGTGTTAATGTTATTGCATGGGGTCTT TCACTTGAAAGGCCAACGATGATCCTTTATGGTATCGACAACATAAGGGACCTGTTTGGA CCAAAGGTTGATTTCAACCTCATCAAGAGCAACCCACTATGCCGATTGGGACTGTAG

Peptide Sequence

PEP ID	Zm00001d018147_P002
PEP Infomation	pep chromosome:B73_RefGen_v4:5:215514653:215519823:1 gene:Zm00001d018147 transcript:Zm00001d018147_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Phenylalanine--tRNA ligase alpha subunit cytoplasmic
Sequence	MAEKSPAADVEAGLLAHLNSAGEVPDSRSFASSLGVSHLELEGVIKSLSAFRIVDSTDII KETWVLTEEAKGYAAKGSPEAQLVAAISPEGASKDALKAILGDAFDVGMKAAARNKWIGF EKGNKDLVLRKVESVKDELQEQLRRLENGEVVSDKVIDDLKRRKLITKEKSIWYSLKKGS EFVVKRKTLATDVTTEHLRSGDWKDLEFKDYNYGAQGQPIAKGYVQPLMEVREAIENIFI MMGFTEMPTNNFVESSFWNFDALFQPQQHPARDSHDTFFLKAPATTKQLPDDYLEKVKQV HQSGGYGSKGYGYDWKRDEAEKNLLRTHTTAVSTRMLYKLAQEKPFTPKRYYSIDRVFRN EAVDRTHLAEFHQIEGLICDYGLTLGDLIGVLEDFFSSLGMSKLRFKPAYNPYTEPSMEI FSYHDGLKKWVEVGNSGMFRPEMLLPMGLPEGVNVIAWGLSLERPTMILYGIDNIRDLFG PKVDFNLIKSNPLCRLGL

Transcript Sequence

Transcript ID	Zm00001d018147_T002
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:215514653:215519823:1 gene:Zm00001d018147 gene_biotype:protein_coding transcript_biotype:protein_coding description:Phenylalanine--tRNA ligase alpha subunit cytoplasmic
Sequence	GAGACGAGGACTCCTTTCCCTTCTGTCATCTGAGACTCGGAAGCCTCGGCCGCCGCCGTT ACCACCTCCTTGCGCCATGGCGGAGAAGTCGCCGGCAGCCGACGTGGAAGCCGGTCTCCT TGCCCACCTCAACTCAGCGGGAGAGGTCCCCGACTCACGCTCTTTCGCTTCCTCCCTCGG CGTCTCCCACCTCGAACTTGAGGGCGTCATCAAGAGCCTCTCAGCTTTCCGCATCGTCGA CAGCACAGACATCATCAAGGAGACATGGGTGCTCACCGAGGAGGCCAAGGGCTACGCCGC CAAGGGCTCCCCCGAGGCACAGCTCGTCGCCGCAATTTCACCGGAGGGTGCCTCTAAGGA CGCACTCAAGGCAATATTGGGAGATGCTTTCGATGTTGGCATGAAGGCAGCCGCGAGGAA CAAGTGGATAGGTTTCGAGAAGGGGAATAAGGACTTAGTCCTTAGGAAGGTTGAGAGCGT AAAGGATGAGCTGCAAGAGCAGCTTAGAAGACTAGAGAATGGGGAGGTTGTTTCTGATAA AGTGATCGATGATTTGAAGAGAAGGAAACTTATTACGAAAGAGAAATCAATTTGGTACTC TCTAAAGAAGGGGTCTGAGTTTGTTGTAAAGAGAAAAACGTTGGCTACTGATGTGACAAC AGAACACCTTAGGAGTGGTGACTGGAAGGACCTTGAATTCAAAGACTATAATTATGGAGC TCAAGGTCAACCTATAGCCAAAGGTTATGTTCAGCCTTTGATGGAGGTTCGTGAGGCAAT CGAGAACATCTTTATTATGATGGGATTCACTGAGATGCCAACCAACAATTTCGTCGAAAG CAGCTTCTGGAATTTCGATGCACTGTTTCAGCCTCAACAGCATCCTGCTCGGGATTCACA TGATACATTTTTCCTGAAAGCTCCAGCAACTACAAAACAGTTGCCTGACGACTATCTTGA GAAAGTAAAGCAAGTTCATCAGTCTGGCGGTTATGGCTCCAAAGGATATGGTTATGATTG GAAACGGGATGAAGCGGAGAAGAATCTTCTCCGTACTCATACAACTGCTGTTTCCACGAG AATGTTATACAAGCTTGCTCAGGAGAAACCTTTTACTCCAAAGAGGTATTACTCCATTGA TCGTGTTTTCCGCAATGAAGCTGTTGACCGGACTCATCTTGCTGAATTCCACCAGATAGA GGGACTTATCTGTGATTATGGTTTGACACTTGGTGATCTGATTGGTGTATTGGAGGATTT CTTCTCAAGTCTAGGCATGTCCAAGCTGCGTTTCAAGCCTGCCTACAATCCATATACTGA ACCCAGCATGGAAATTTTCAGTTACCATGATGGTTTGAAGAAATGGGTGGAAGTTGGTAA TTCAGGCATGTTCAGGCCAGAGATGTTGCTTCCCATGGGACTGCCAGAAGGTGTTAATGT TATTGCATGGGGTCTTTCACTTGAAAGGCCAACGATGATCCTTTATGGTATCGACAACAT AAGGGACCTGTTTGGACCAAAGGTTGATTTCAACCTCATCAAGAGCAACCCACTATGCCG ATTGGGACTGTAGTGACTAGTGAGGTACAGGGACTCTGAAGCTTGATCACAATGTGCCAA AGAATTTGTTTTCCTTTTTTGTTGTGCTCCCTTGAAGTTTGAACACCGATTCATGTATCT CTGGTTATGGCTCAAGAAAACCGCTCATGATCAGCCATGTTCAGGTCCTGAAATCCCTAC TAATTCTAAAGCTCTGGCTAAGCTATGGAATCAGGGGGTCAGCAATGACTTTTCTACTTT ATTTTGGTGTGACAAGTTTTTGGGTTGCTGAATCAAAGGATTTGGGGGCACCAATGGTGC TTGCTGCTGTCCCAATGAGGCAAACAAAGCGCAGAACAGTGGCAGAAGCGATGCAAAATC AAAGCTTGGACGACCATGGACATACACGGAGGGAGGCCTCTCAATGATGGTTCGAATATT TCCAGCTCTAGAATGTTGTACAAGAGGTCATCCTGTGAACCGCCCAAGAGACGTCTAAAT GACATCTAGTAATGGTCTATCGAAATGGAGATGTTGTCTTGTGACC