Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d018074_T002
CDS Infomation	cds chromosome:B73_RefGen_v4:5:213809766:213814190:1 gene:Zm00001d018074 gene_biotype:protein_coding transcript_biotype:protein_coding description:Aspartic proteinase-like protein 1
Sequence	ATGCGCCTCCCGGTCCTTTTCGCCCTGCAGCTGGTCGCCTTGGCGGCGGCAGCTTCGGCG GCCGAGGCCGCGGCGACGTTCTCCTCGAGGATGGTGCACCGTCTGTCCGACGAGGCCCGG CTGGAAGCGGGCCCGCGCATGGGGTTGTGGCCGCAGCGCGGAAGCGGGGGCTACTACCGC GCGCTGCTGAGGAGCGATCTCCAGCGGCAGAAGCGGCGGCTCGCGGGCAAGAACCAGCTC CTCTCGCTCTCAAAGGGCGGCAGCACCTTCTCCCCCGGCAACGACTTAGGCTGGTGCTCC GTCGTAAATGGAGCATCTATTATGCAGGATAGAGATCTTGGAATATACAAGCCTGCCGAA TCAACAACAAGTCGGCATCTTCCTTGCAGCCACGAGCTATGTCAACCGGGTTCAGGCTGC ACAAACCCAAAGCAACCTTGCACATACAATATTGACTACTTTTCAGAAAATACTACCAGC TCTGGTTTGCTAATTGAGGATTCCCTACACTTGAACTCCAGGGAGGGCCATGCACCAGTA AATGCTTCAGTTATTATTGGTGTGCCCTTCTGGAATAGCTGTGGTCGAAAGCAAAGTGGT GACTATCTGGATGGCATTGCACCGGATGGACTCCTTGGCCTTGGAATGGCAGACATTTCA GTTCCCAGTTTCCTTGCAAGAGCTGGACTAGTTCGGAATTCCTTCTCGATGTGCTTCAAG GAAGATAGTTCTGGGAGAATTTTCTTTGGAGATCAAGGAGTGTCCTCTCAACAATCCACA CCGTTTGTTCCTCTGTATGGCAAACTTCAAACTTATGCTGTTAATGTCGACAAATCTTGT ATTGGACATAAATGTCTTGAGGGTTCTAGCTTCCAGGCTTTAGTCGATAGTGGAACATCA TTTACTTCTCTTCCTCCTGATGTTTACAAGGCTTTCACAACGGAGTTTGACAAACAAATT AATGCTTCAAGGGTGCCTTACGAAGACAGTACCTGGAAATATTGTTACAGTGCTAGTCCT CTTGAGATGCCTGATGTGCCAACCATAATCCTGGCATTCGCTGCAAACAAGAGCTTCCAG GCTGTTAATCCTATCTTGCCATTTAATGACGAACAGGGAGCGCTTGCCAGGTTCTGCTTA GCTGTACTGCCATCAACGGAACCTATTGGAATTATTGGCCAGAATTTCCTGGTTGGATAC CACGTTGTCTTCGACAGAGAGAGCATGAAGTTGGGCTGGTACCGCTCTGAATGTCGCGAC GTTGACAACAGCACGACCGTGCCGCTGGGCCCATCGCAGCACGGCAGTTCAGAGGACCCG TTGCCGTCGAACGAGCAGCAGACTTCCCCGCCCGTGACGCCTGCAACGACAGGCACGGCT CCTCCCTCCAGTGCAACGACGAACCGACAGATGCTCTTTGCTAGCTCTTACCCGTTGCTG TTTCTGACAATGTCCACTGTGTTCTTCATCTCATGA

Peptide Sequence

PEP ID	Zm00001d018074_P002
PEP Infomation	pep chromosome:B73_RefGen_v4:5:213809766:213814190:1 gene:Zm00001d018074 transcript:Zm00001d018074_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Aspartic proteinase-like protein 1
Sequence	MRLPVLFALQLVALAAAASAAEAAATFSSRMVHRLSDEARLEAGPRMGLWPQRGSGGYYR ALLRSDLQRQKRRLAGKNQLLSLSKGGSTFSPGNDLGWCSVVNGASIMQDRDLGIYKPAE STTSRHLPCSHELCQPGSGCTNPKQPCTYNIDYFSENTTSSGLLIEDSLHLNSREGHAPV NASVIIGVPFWNSCGRKQSGDYLDGIAPDGLLGLGMADISVPSFLARAGLVRNSFSMCFK EDSSGRIFFGDQGVSSQQSTPFVPLYGKLQTYAVNVDKSCIGHKCLEGSSFQALVDSGTS FTSLPPDVYKAFTTEFDKQINASRVPYEDSTWKYCYSASPLEMPDVPTIILAFAANKSFQ AVNPILPFNDEQGALARFCLAVLPSTEPIGIIGQNFLVGYHVVFDRESMKLGWYRSECRD VDNSTTVPLGPSQHGSSEDPLPSNEQQTSPPVTPATTGTAPPSSATTNRQMLFASSYPLL FLTMSTVFFIS

Transcript Sequence

Transcript ID	Zm00001d018074_T002
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:213809766:213814190:1 gene:Zm00001d018074 gene_biotype:protein_coding transcript_biotype:protein_coding description:Aspartic proteinase-like protein 1
Sequence	CTCCTCAATCAAATTTGGAACCAGTACAGGGTCTTTACAAGAAAACGACCGATACCGTCT CCGCCTTTCCTTCCTTTTGCGCTAGCTTCCACAGCATCACCACCGCCGCCCCAGCTCGCT TCCCTCCCCGCTACACGGACACGGCCGCTCAGCGCTCACCACCGCTTCCATGCTCCTCGC CTCGTCTCCCGCTCGCGAGACGTAGCTCCAGATCCTCTCCCCCACCCACGGCAGCACCGC ATTACCCTCAGATCCACCCCCGCGAGCCTCATTTCAGATCCACCCATGCGCCTCCCGGTC CTTTTCGCCCTGCAGCTGGTCGCCTTGGCGGCGGCAGCTTCGGCGGCCGAGGCCGCGGCG ACGTTCTCCTCGAGGATGGTGCACCGTCTGTCCGACGAGGCCCGGCTGGAAGCGGGCCCG CGCATGGGGTTGTGGCCGCAGCGCGGAAGCGGGGGCTACTACCGCGCGCTGCTGAGGAGC GATCTCCAGCGGCAGAAGCGGCGGCTCGCGGGCAAGAACCAGCTCCTCTCGCTCTCAAAG GGCGGCAGCACCTTCTCCCCCGGCAACGACTTAGGCTGGTGCTCCGTCGTAAATGGAGCA TCTATTATGCAGGATAGAGATCTTGGAATATACAAGCCTGCCGAATCAACAACAAGTCGG CATCTTCCTTGCAGCCACGAGCTATGTCAACCGGGTTCAGGCTGCACAAACCCAAAGCAA CCTTGCACATACAATATTGACTACTTTTCAGAAAATACTACCAGCTCTGGTTTGCTAATT GAGGATTCCCTACACTTGAACTCCAGGGAGGGCCATGCACCAGTAAATGCTTCAGTTATT ATTGGTGTGCCCTTCTGGAATAGCTGTGGTCGAAAGCAAAGTGGTGACTATCTGGATGGC ATTGCACCGGATGGACTCCTTGGCCTTGGAATGGCAGACATTTCAGTTCCCAGTTTCCTT GCAAGAGCTGGACTAGTTCGGAATTCCTTCTCGATGTGCTTCAAGGAAGATAGTTCTGGG AGAATTTTCTTTGGAGATCAAGGAGTGTCCTCTCAACAATCCACACCGTTTGTTCCTCTG TATGGCAAACTTCAAACTTATGCTGTTAATGTCGACAAATCTTGTATTGGACATAAATGT CTTGAGGGTTCTAGCTTCCAGGCTTTAGTCGATAGTGGAACATCATTTACTTCTCTTCCT CCTGATGTTTACAAGGCTTTCACAACGGAGTTTGACAAACAAATTAATGCTTCAAGGGTG CCTTACGAAGACAGTACCTGGAAATATTGTTACAGTGCTAGTCCTCTTGAGATGCCTGAT GTGCCAACCATAATCCTGGCATTCGCTGCAAACAAGAGCTTCCAGGCTGTTAATCCTATC TTGCCATTTAATGACGAACAGGGAGCGCTTGCCAGGTTCTGCTTAGCTGTACTGCCATCA ACGGAACCTATTGGAATTATTGGCCAGAATTTCCTGGTTGGATACCACGTTGTCTTCGAC AGAGAGAGCATGAAGTTGGGCTGGTACCGCTCTGAATGTCGCGACGTTGACAACAGCACG ACCGTGCCGCTGGGCCCATCGCAGCACGGCAGTTCAGAGGACCCGTTGCCGTCGAACGAG CAGCAGACTTCCCCGCCCGTGACGCCTGCAACGACAGGCACGGCTCCTCCCTCCAGTGCA ACGACGAACCGACAGATGCTCTTTGCTAGCTCTTACCCGTTGCTGTTTCTGACAATGTCC ACTGTGTTCTTCATCTCATGAGCAACTGATAATCTGATATGCTGGTAATCGATAGCCCTC TGTATATTGTATGTGCTTTATATGTGGTGCCTTTTGCTCTATTTTTT