Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d018057_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:5:213288385:213294605:-1 gene:Zm00001d018057 gene_biotype:protein_coding transcript_biotype:protein_coding description:RINT1-like protein MAG2
Sequence

ATGGCTCTCAAACTTGACAGTTTGGTGGGTGATATAGAAGATGCAGTTTCTTCTTCTGTT
ACTGGAAAACTTAAATCTCGTGTAGACAATTCGGAGGAAACACATCATGTTGCTATTGGA
TATTTGAAAAGCATAGAAGATCTTCTAGCTTCTGTAGCTGTGACTAGACCACAATGGACT
CGCCTTCTATCTTCCGTGGATCACAGAGTAGACCGATCTTTAGCTATACTAAGACCACAA
GCCATTGTTGATCATCGATCACTTCTTTCTTCCCTTGGCTGGCCTCCTTCACTTGCCGGC
TCAAAATTTTCAAGTATTAATTCGGGGAAACAAGCAGAGATTGTGAACCCATTGTTTGTG
ATGCGGGGTGACCTGAAAAGCAAGTATTCCGAGAGCTTTCTTGCACTATGCAATTTGCAG
GGATTACAGAAACGTAGAAAAGCTAGACAACTGAAAGGGCATTGTGTGGGTAATCAACTA
CGTCAACCATTATGGGTAATTGAAGAGCTAGTAAATCCAATATCTACAGCTGCACAACGC
CATTTCTCAAAATGGGCTGAAAAGCCTGAATTTGTTTTTGCTCTTGCTTATAAGATAATT
AGAGATTTTGTTGATTCTATGGATGAGATTCTACAGCCCCTTGTGGATAAGGCTAACCTT
ATTGGGTATAGTTGTAGGGAGGAATGGATTTCAGGAATGGTCATTGCATTGTCTACATAC
TTGGCGAAAGAGATATTTCCTAAGCAGATTGAAGTTCTTCAGGAAAGTAGTAGCTCAAGT
GACTCAGGCAGCACGGCCTATCAGGCTAGAGTCTCGTGGCTCAGCCTTGTTGATCTGATG
ATATCTTTTGACAAGCGGATTCAAGATTTAATCTTGAGTGCTGGACTACTACTTACGGTA
AAGGATGATGACAGTTGGCAGAGGATCTCAGTTCTCTGTGTCTTCTGTGATCGCCCAGAT
TGGCTTCAAGTATGGGCGGAGATTGAGAGACAAGAGAGTCTTAATAAGCTGCGATCAGCA
ATGGATTTAGAGAAAAATTGGAGTACAGGAATTCGAGGAACTATGCTTGAATACTCAGAT
GATTACAAGGCTCCAGTAATCACCAGTGTCGTTCATCATACCTTGTCTTTGCTAATTGAT
CGTGCCCGTCCCATCCCTAGCATCACACTTAGGGCAGAATTCATTAGTATGTCTGCTGCA
CCCATCATATCAGAATTCCTTGGTTACATGCTTCGGAGGTGTCAAGAAGCAGAGGGGCTG
ACTGCTCTGGCTGATGATAATGCTGTGCTCAAGGTATCACAATCTATCAATGCAGCTCGA
TATTTCGAATCCACGTTGGCAGAATGGTGCGAGGATGTTTTTTTCCTTGAGATGGAAAAT
TTGACTGTAAATGGTGAGAGTGGGTGTATCTTTCAGCAAGAGATAAACCATCTGAAAGAG
TTCAGAGTGGAATGGACTGATAAGATTTCCACTGTCATTTTGCGTGGATTCGATGCTCGT
TCTCGGGATTATCTAAAAAACAAGAGGCAGTGGCTGGAGAAATCAGATGGACCTGCTGTA
TCCAGAACCTTCATAGAATCTTTAGACTACATGCAAGAGCAACTATCCAAGCTGCAAGGT
GGCCTAAATACGGTTGATTTTGTGACCGTATGGAGAGGTGTGGCAAGCGGGGTAGACCAG
CTGCTTTTCGCCGGCATTTTCACAAGCGGCACAAAGGTTAGCAGCGATGGAGTGGAGAGG
CTACAGGGCGACCTCAGCGTTTTGTTCGCTATTTTTTCAGCATGGTGTCTGAGACCTGAA
GGCTTCTTCCCTCGACTGTCCGAGGGATTGAGGTTACTGAAGATTGACGAACAGCAGCTT
AGAGAGGGGGCGTTTAAAGATAAGAATTGGTTGAGGGAACATGGCATTAGGCATCTGGCA
GCTGCCGACACCGAGAGGATAATAAAAAACCGGGTATATGATGCATGA

Peptide Sequence

PEP ID

Zm00001d018057_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:5:213288385:213294605:-1 gene:Zm00001d018057 transcript:Zm00001d018057_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:RINT1-like protein MAG2
Sequence

MALKLDSLVGDIEDAVSSSVTGKLKSRVDNSEETHHVAIGYLKSIEDLLASVAVTRPQWT
RLLSSVDHRVDRSLAILRPQAIVDHRSLLSSLGWPPSLAGSKFSSINSGKQAEIVNPLFV
MRGDLKSKYSESFLALCNLQGLQKRRKARQLKGHCVGNQLRQPLWVIEELVNPISTAAQR
HFSKWAEKPEFVFALAYKIIRDFVDSMDEILQPLVDKANLIGYSCREEWISGMVIALSTY
LAKEIFPKQIEVLQESSSSSDSGSTAYQARVSWLSLVDLMISFDKRIQDLILSAGLLLTV
KDDDSWQRISVLCVFCDRPDWLQVWAEIERQESLNKLRSAMDLEKNWSTGIRGTMLEYSD
DYKAPVITSVVHHTLSLLIDRARPIPSITLRAEFISMSAAPIISEFLGYMLRRCQEAEGL
TALADDNAVLKVSQSINAARYFESTLAEWCEDVFFLEMENLTVNGESGCIFQQEINHLKE
FRVEWTDKISTVILRGFDARSRDYLKNKRQWLEKSDGPAVSRTFIESLDYMQEQLSKLQG
GLNTVDFVTVWRGVASGVDQLLFAGIFTSGTKVSSDGVERLQGDLSVLFAIFSAWCLRPE
GFFPRLSEGLRLLKIDEQQLREGAFKDKNWLREHGIRHLAAADTERIIKNRVYDA

Transcript Sequence

Transcript ID

Zm00001d018057_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:5:213288385:213294605:-1 gene:Zm00001d018057 gene_biotype:protein_coding transcript_biotype:protein_coding description:RINT1-like protein MAG2
Sequence

GATTATGAGCTCGCACAAACTGAAAAAATGCAGGTCGTCTCCTTCTCCGGTTGAGCTACG
CTGCCCCCCCTCCAAACCCTAACCCGTTGTGTGATCCGTTCTGCTATGGAAGCAGCAGCT
CAACCCCATCCGCTCCAGCTTTTCCAAGACATGGACCCGGGGGTCCGCCGTTTCCTCGAC
GCCCGATTCCGCTCGGCGGCCGATCTCGCCACGGCCTCCGATGTCGAGGCCGAGATCCGC
GGGCACTGTGCGGAGCTAGAGGCATCGATTTACGACCTTTACGTACGCCTACAGGAAACT
GCCGCAGCGTACTCGTCTTGCTGCGAGGTCGCTGGTTCGGCCCTCCGTGGCGTCCGCGGC
CGGCTTGGTGCCCTCAAAGCATCCGGGTCAACAGGGGCTGGAGAAGAGGTGGAGGTGAGA
ACGGAGCAGATGCAGTTCGAGCAACTCCCTGCTCTGGCCTCCGAGGTGGCGAGAGTAGAG
ATGGTCAGAGAGTATGCAGGTTGTCCTATACAGAAATGGCTCTCAAACTTGACAGTTTGG
TGGGTGATATAGAAGATGCAGTTTCTTCTTCTGTTACTGGAAAACTTAAATCTCGTGTAG
ACAATTCGGAGGAAACACATCATGTTGCTATTGGATATTTGAAAAGCATAGAAGATCTTC
TAGCTTCTGTAGCTGTGACTAGACCACAATGGACTCGCCTTCTATCTTCCGTGGATCACA
GAGTAGACCGATCTTTAGCTATACTAAGACCACAAGCCATTGTTGATCATCGATCACTTC
TTTCTTCCCTTGGCTGGCCTCCTTCACTTGCCGGCTCAAAATTTTCAAGTATTAATTCGG
GGAAACAAGCAGAGATTGTGAACCCATTGTTTGTGATGCGGGGTGACCTGAAAAGCAAGT
ATTCCGAGAGCTTTCTTGCACTATGCAATTTGCAGGGATTACAGAAACGTAGAAAAGCTA
GACAACTGAAAGGGCATTGTGTGGGTAATCAACTACGTCAACCATTATGGGTAATTGAAG
AGCTAGTAAATCCAATATCTACAGCTGCACAACGCCATTTCTCAAAATGGGCTGAAAAGC
CTGAATTTGTTTTTGCTCTTGCTTATAAGATAATTAGAGATTTTGTTGATTCTATGGATG
AGATTCTACAGCCCCTTGTGGATAAGGCTAACCTTATTGGGTATAGTTGTAGGGAGGAAT
GGATTTCAGGAATGGTCATTGCATTGTCTACATACTTGGCGAAAGAGATATTTCCTAAGC
AGATTGAAGTTCTTCAGGAAAGTAGTAGCTCAAGTGACTCAGGCAGCACGGCCTATCAGG
CTAGAGTCTCGTGGCTCAGCCTTGTTGATCTGATGATATCTTTTGACAAGCGGATTCAAG
ATTTAATCTTGAGTGCTGGACTACTACTTACGGTAAAGGATGATGACAGTTGGCAGAGGA
TCTCAGTTCTCTGTGTCTTCTGTGATCGCCCAGATTGGCTTCAAGTATGGGCGGAGATTG
AGAGACAAGAGAGTCTTAATAAGCTGCGATCAGCAATGGATTTAGAGAAAAATTGGAGTA
CAGGAATTCGAGGAACTATGCTTGAATACTCAGATGATTACAAGGCTCCAGTAATCACCA
GTGTCGTTCATCATACCTTGTCTTTGCTAATTGATCGTGCCCGTCCCATCCCTAGCATCA
CACTTAGGGCAGAATTCATTAGTATGTCTGCTGCACCCATCATATCAGAATTCCTTGGTT
ACATGCTTCGGAGGTGTCAAGAAGCAGAGGGGCTGACTGCTCTGGCTGATGATAATGCTG
TGCTCAAGGTATCACAATCTATCAATGCAGCTCGATATTTCGAATCCACGTTGGCAGAAT
GGTGCGAGGATGTTTTTTTCCTTGAGATGGAAAATTTGACTGTAAATGGTGAGAGTGGGT
GTATCTTTCAGCAAGAGATAAACCATCTGAAAGAGTTCAGAGTGGAATGGACTGATAAGA
TTTCCACTGTCATTTTGCGTGGATTCGATGCTCGTTCTCGGGATTATCTAAAAAACAAGA
GGCAGTGGCTGGAGAAATCAGATGGACCTGCTGTATCCAGAACCTTCATAGAATCTTTAG
ACTACATGCAAGAGCAACTATCCAAGCTGCAAGGTGGCCTAAATACGGTTGATTTTGTGA
CCGTATGGAGAGGTGTGGCAAGCGGGGTAGACCAGCTGCTTTTCGCCGGCATTTTCACAA
GCGGCACAAAGGTTAGCAGCGATGGAGTGGAGAGGCTACAGGGCGACCTCAGCGTTTTGT
TCGCTATTTTTTCAGCATGGTGTCTGAGACCTGAAGGCTTCTTCCCTCGACTGTCCGAGG
GATTGAGGTTACTGAAGATTGACGAACAGCAGCTTAGAGAGGGGGCGTTTAAAGATAAGA
ATTGGTTGAGGGAACATGGCATTAGGCATCTGGCAGCTGCCGACACCGAGAGGATAATAA
AAAACCGGGTATATGATGCATGACGAATTGTACTTAACTAACATCAGTCTGTAGTTGGGA
AAAGAGAGGGATTGTCGAGTTTGAAAGAATTCACACTGTTTTACTCCATACAGGTCTTGT
TTCTTCTTTATATACACCTACGTTCTTGGCGTATCGGCTGGTGTAATAAGGTACATTATA
TTTATCAAATATATATATGAAGAGAGACTAGCTATGGATTG