Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d018033_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:5:212494773:212500400:-1 gene:Zm00001d018033 gene_biotype:protein_coding transcript_biotype:protein_coding description:Starch synthase IIb-2
Sequence	ATGGCGGGGGCAACCTCTTCCTCGTCCGTGTCTTTGATCCTCATCCTCGTCGCGTCCTCC TCGCCGCGGCGCAGCCGGGGCAGGGTGGGCATTGCTCTGCGCTCGTACGGCTACAGCGGC GCCGAGCTGCGGTTGCATTGGGCGCGTCGGGGCTCGTCTCGGGATGGACCGGCGGTAGTG CGCGCCGCAGCGGTTCCGGCCGGGGGTGAGGGCGAGGACGCCGCGGCGACTCAGGCTGTA TATTCTACTTCACCTCCCAAAACTGCGACGTCTGCGCCGAAGCAAAACCAGAGCGCTGCA AAGCAAAACGGAACAGTTGGGAGCAGCAGTGCGAGCAAATCCCCGGCGCCTGCGGTATCT GAATCCAAAGCTGAACCATCTGCTCCTGTCACCAAGACAGAAACCGATGCCAGTGCGAAG GTTGAAGAGCTGAAGCCCTCAGTGGATGATGCTAAACCCGTAGAAAGCATAGGCATCCCT GAGCCGGTGGATGCTAAGGTGGACGCCGCTGCAGCTACTGATGCCGCGGCGAGTGCTGCT GATGACACTGAAGACAAGGAACATGGCCCTTTGGCTGGGCCTAATGTGATGAATGTCGTC GTGGTGGCTTCTGAATGCGCTCCTTTCTGCAAGACAGGTGGCCTTGGAGATGTTGTGGGT GCTTTGCCCAAGGCTTTGGCGAGGAGAGGACACCGTGTTATGGTCGTGATACCAAGATAT GGAGAGTATGCAGAAGCCCGGGATTTAGGTGTAAGGAGACGTTACAGGGTGGCTGGACAG GATTCAGAAGTTACTTATTTTCACTCTTACATTGATGGCGTTGATTTTGTATTCATAGAA GCCCCTCCCTTCCGGCACCGGCACAATGATATTTATGGAGGAGAAAGATCGGATGTTTTG AAGCGCATAATTTTGTTCTGCAAGGCCGCTGTTGAGGTTCCATGGTACGCTCCATGTGGT GGTACCGTCTATGGTGATGGCAATTTAGTTTTCATTGCTAATGATTGGCATACGGCACTT CTTCCGGTCTACCTAAAAGCCTACTACCGGGACAATGGTTTGATGCAGTATGCTCGCTCA GTGCTTGTGATACACAACATTGCTCATCAGGGTCGTGGCCCTGTAGACGACTTCGTCAAC TTTGACTTGCCTGAACACTACATCGATCACTTCAAACTGTACGACAATATCGGTGGCGAG CACTGCAACGTTTTTGCCGCAGGGCTGAAGATGGCAGACCAGGTGGTGACCGTCAGTAAT GGATACCTATGGGAGCTGAGGACATCGGAAGGTGGGTGGGGCCTCCACGACATCATAAAC CAGAACGACTGGAAGCTGCAGGGCATCGTGAACGGCATCGACATGAGCGAGTGGAACCCC GCTGTGGACGTGCACCTCCACTCCGACGAATACACCAACTACACGTTCGAGACGCTGGAC ACGGGCAAGCGGCAGTGCAAGGCTGCCCTGCAGCGGCAGCTCGGCCTGCAGGTCCGCGAC GACGTGCCACTAATCGGGTTCATCGGGCGGCTGGACCACCAGAAGGGCGTGGACATCATC GCCGACGCGATCCACTGGATCGCGGGACAGGACGTGCAGCTTGTGATGCTGGGCACGGGG CGCCCCGACCTGGAGGACATGCTGCGGCGGTGCGAGGCGGAGCACAGCGACAAGGTGCGC GCGTGGGTGGGGTTCTCGGTGCCCTTGGCGCACCGCATCACGGCGGGCGCGGACGTCCTG CTGATGCCGTCGCGGTTCGAGCCGTGCGGGCTGAACCAGCTCTACGCGATGGCGTACGGG ACCGTGCCCGTGGTGCACGCCGTGGGCGGGCTCCGGGACACGGTGGCGCCGTTCGACCCG TTCAACGACACCGGGCTGGGGTGGACGTTCGACCGCGCGGAGGCGAATCGGATGATCGAC GCGCTCTCGCACTGCCTCAACACGTTCCGGAACTACAAGGAGAGCTGGCGCGGCCTGGAG GCGCGCGGCATGGCGCAGGACCTCAGCTGGGACCACGCCGCCGTGCTGTATGAGGACGTG CTCGTCAAGGCCAAGTACCAGTGGTAA

Peptide Sequence

PEP ID	Zm00001d018033_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:5:212494773:212500400:-1 gene:Zm00001d018033 transcript:Zm00001d018033_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Starch synthase IIb-2
Sequence	MAGATSSSSVSLILILVASSSPRRSRGRVGIALRSYGYSGAELRLHWARRGSSRDGPAVV RAAAVPAGGEGEDAAATQAVYSTSPPKTATSAPKQNQSAAKQNGTVGSSSASKSPAPAVS ESKAEPSAPVTKTETDASAKVEELKPSVDDAKPVESIGIPEPVDAKVDAAAATDAAASAA DDTEDKEHGPLAGPNVMNVVVVASECAPFCKTGGLGDVVGALPKALARRGHRVMVVIPRY GEYAEARDLGVRRRYRVAGQDSEVTYFHSYIDGVDFVFIEAPPFRHRHNDIYGGERSDVL KRIILFCKAAVEVPWYAPCGGTVYGDGNLVFIANDWHTALLPVYLKAYYRDNGLMQYARS VLVIHNIAHQGRGPVDDFVNFDLPEHYIDHFKLYDNIGGEHCNVFAAGLKMADQVVTVSN GYLWELRTSEGGWGLHDIINQNDWKLQGIVNGIDMSEWNPAVDVHLHSDEYTNYTFETLD TGKRQCKAALQRQLGLQVRDDVPLIGFIGRLDHQKGVDIIADAIHWIAGQDVQLVMLGTG RPDLEDMLRRCEAEHSDKVRAWVGFSVPLAHRITAGADVLLMPSRFEPCGLNQLYAMAYG TVPVVHAVGGLRDTVAPFDPFNDTGLGWTFDRAEANRMIDALSHCLNTFRNYKESWRGLE ARGMAQDLSWDHAAVLYEDVLVKAKYQW

Transcript Sequence

Transcript ID	Zm00001d018033_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:212494773:212500400:-1 gene:Zm00001d018033 gene_biotype:protein_coding transcript_biotype:protein_coding description:Starch synthase IIb-2
Sequence	ATGGCGGGGGCAACCTCTTCCTCGTCCGTGTCTTTGATCCTCATCCTCGTCGCGTCCTCC TCGCCGCGGCGCAGCCGGGGCAGGGTGGGCATTGCTCTGCGCTCGTACGGCTACAGCGGC GCCGAGCTGCGGTTGCATTGGGCGCGTCGGGGCTCGTCTCGGGATGGACCGGCGGTAGTG CGCGCCGCAGCGGTTCCGGCCGGGGGTGAGGGCGAGGACGCCGCGGCGACTCAGGCTGTA TATTCTACTTCACCTCCCAAAACTGCGACGTCTGCGCCGAAGCAAAACCAGAGCGCTGCA AAGCAAAACGGAACAGTTGGGAGCAGCAGTGCGAGCAAATCCCCGGCGCCTGCGGTATCT GAATCCAAAGCTGAACCATCTGCTCCTGTCACCAAGACAGAAACCGATGCCAGTGCGAAG GTTGAAGAGCTGAAGCCCTCAGTGGATGATGCTAAACCCGTAGAAAGCATAGGCATCCCT GAGCCGGTGGATGCTAAGGTGGACGCCGCTGCAGCTACTGATGCCGCGGCGAGTGCTGCT GATGACACTGAAGACAAGGAACATGGCCCTTTGGCTGGGCCTAATGTGATGAATGTCGTC GTGGTGGCTTCTGAATGCGCTCCTTTCTGCAAGACAGGTGGCCTTGGAGATGTTGTGGGT GCTTTGCCCAAGGCTTTGGCGAGGAGAGGACACCGTGTTATGGTCGTGATACCAAGATAT GGAGAGTATGCAGAAGCCCGGGATTTAGGTGTAAGGAGACGTTACAGGGTGGCTGGACAG GATTCAGAAGTTACTTATTTTCACTCTTACATTGATGGCGTTGATTTTGTATTCATAGAA GCCCCTCCCTTCCGGCACCGGCACAATGATATTTATGGAGGAGAAAGATCGGATGTTTTG AAGCGCATAATTTTGTTCTGCAAGGCCGCTGTTGAGGTTCCATGGTACGCTCCATGTGGT GGTACCGTCTATGGTGATGGCAATTTAGTTTTCATTGCTAATGATTGGCATACGGCACTT CTTCCGGTCTACCTAAAAGCCTACTACCGGGACAATGGTTTGATGCAGTATGCTCGCTCA GTGCTTGTGATACACAACATTGCTCATCAGGGTCGTGGCCCTGTAGACGACTTCGTCAAC TTTGACTTGCCTGAACACTACATCGATCACTTCAAACTGTACGACAATATCGGTGGCGAG CACTGCAACGTTTTTGCCGCAGGGCTGAAGATGGCAGACCAGGTGGTGACCGTCAGTAAT GGATACCTATGGGAGCTGAGGACATCGGAAGGTGGGTGGGGCCTCCACGACATCATAAAC CAGAACGACTGGAAGCTGCAGGGCATCGTGAACGGCATCGACATGAGCGAGTGGAACCCC GCTGTGGACGTGCACCTCCACTCCGACGAATACACCAACTACACGTTCGAGACGCTGGAC ACGGGCAAGCGGCAGTGCAAGGCTGCCCTGCAGCGGCAGCTCGGCCTGCAGGTCCGCGAC GACGTGCCACTAATCGGGTTCATCGGGCGGCTGGACCACCAGAAGGGCGTGGACATCATC GCCGACGCGATCCACTGGATCGCGGGACAGGACGTGCAGCTTGTGATGCTGGGCACGGGG CGCCCCGACCTGGAGGACATGCTGCGGCGGTGCGAGGCGGAGCACAGCGACAAGGTGCGC GCGTGGGTGGGGTTCTCGGTGCCCTTGGCGCACCGCATCACGGCGGGCGCGGACGTCCTG CTGATGCCGTCGCGGTTCGAGCCGTGCGGGCTGAACCAGCTCTACGCGATGGCGTACGGG ACCGTGCCCGTGGTGCACGCCGTGGGCGGGCTCCGGGACACGGTGGCGCCGTTCGACCCG TTCAACGACACCGGGCTGGGGTGGACGTTCGACCGCGCGGAGGCGAATCGGATGATCGAC GCGCTCTCGCACTGCCTCAACACGTTCCGGAACTACAAGGAGAGCTGGCGCGGCCTGGAG GCGCGCGGCATGGCGCAGGACCTCAGCTGGGACCACGCCGCCGTGCTGTATGAGGACGTG CTCGTCAAGGCCAAGTACCAGTGGTAAGTGAGTTACGCCGACGCCCTTCATGTCGCGGGA CAGTCCTGGACGCCCTGGGCACTGCGTGCTCTTCTCACGCGGCTTTGCTGCGTGCGGCGC ATTTGCTCAATTGGCGCGGGGCGATGGTGGTTGGCCTACGTCGGCTTCGGCTAGGTGCCT TCGGATTTTCAGCTTCTTACCACCAAAACACCAAAAGCTGCTGCGGACTATTAAACGCTC AGTTTTTCAGTTAGCTTCTATAAAAATCGATCGTAAAAATCATCTATAATCAACATAAAC ACATAATGGACGGAGTACTTTTAATAATAGAAATCTATCGCTTTGTAGATCTTACCCTAT GGACACCTTCATCTTGAAAATTGTTTGGTTGAAATAACAGTGAGTTGTATATTCTATAAG AAATATCCATCATTATGGCATTGTGAAGAGGGTATACAAGAAATATTTGTTATGACATTG CGAAGACGGTATATATGCTAATTGGTTGGATTAAAAGGTAGCTAATACAATAGATATATG TAACCTATTTTTTCTCATAACTATATTATCGTTCACTAACCAAAGCATTAACTTTATTCT ATAGATTCTTGGAAATCTATTTAGCCTTCGTAACCTTTTGTTTAGATTTTAGATACTTTT CACAGTCAGATTCTCTACATAGTCAGATTTTCAAAAAAAAAAACTGGTAAGAAAAAAGCT AAACTAAACAGACGGAATTTGGGTGGGCGCGATGATACCACTGGGCACGGGCACAGGATA ATATGAAAGCGACGGAGTGATGTATTTGAGCTACGGTAATGGCCTGCATTTGGTTCTTAG TCTACGGCTATGTTTTGATCCACTACATTTAAAGAAACTAGTTTCTAAACTTGGTTTCTA AAAACTAACTTTTAGAGACAGAGAACTGAATAGAGGTGTTTGAGTCCACTAGTTTTTTTA AATGGTTTATAGCTTTTTCTATAAGTATTGACTGACCATCAAAAACTGATTTTGGATGGA GTAACTGGATTCTTGGTTTTTAAGAAGCCAGAAAACTAGTTTTTAGAAATTGAATAAAAA ATTGACCTATTTGGAGGACTTTAAGGTTTTAAAACTAGTTTCTAATAAACTGGATAGATC TAAACAGGACCTAGATCACGTTGGACCTGGTTCGAGCCTTCGAGGTGTTCTAAACTATTC AGTATTGAGTTGGAGATGAGGCACATAGAATTCCCACTAATAAATGGGGAGTTGTATGTT ACTTATCGCCACCTCTGTTGTATGTTTATTGGTGCAACCAAGTTTTTCATTCCAGG