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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d018029_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:5:212390087:212391281:-1 gene:Zm00001d018029 gene_biotype:protein_coding transcript_biotype:protein_coding description:Casparian strip membrane protein 5
Sequence

ATGGAGGACAGCAAAGCCCCGGTGTCGGAGCACGGCGGGGAGACCTCCAAGGCCGCGGTG
CTCGTGGGGGTGGCCGCCGGCAGCGGGGGACGCAGGGGCAGGGCGGCTACCCGCGTTCTG
GCCGTGGTCGACCTCATCCTCCGCTCCGTCGCGGTGGTCGCCACCGTCGGCAGCGCCATC
GCCATGGGCACCACCAACCAGACGCTGCCCTTCTTCACGCAGTTCCTCCGGTTCAAGGCG
CAGTACAGCGATCTCCCGACCCTTACGTTCTTCGTGGTGGTGAACTCGATCGTCGCCGCG
TACCTGGTGCTGTCCATACCCCTGTCCATCGTGCACATCATGGCGAGCAGCGCGAAGTAC
AGTAGGCTGGTCTTGGTTTTCTTTGATGCGGCAATGCTGCTGGCGCTGGTGACGGCGGCG
GCGTCGGCGGCCGCGGCGATCGTGTACCTGGCGCACAAGGGCAACGCCAGGGCCAACTGG
CTCGCCATCTGCCAGCAGTTCGACTCCTTCTGCGAGCGCATCTCCGGCTCCCTCATCGGC
TCATTCGCGGCCATGGCTCTGCTCCTTTTGCTCATACTCCTCTCCGCCGCCGCATTGGCG
CGGCGTTAG

Peptide Sequence

PEP ID

Zm00001d018029_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:5:212390087:212391281:-1 gene:Zm00001d018029 transcript:Zm00001d018029_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Casparian strip membrane protein 5
Sequence

MEDSKAPVSEHGGETSKAAVLVGVAAGSGGRRGRAATRVLAVVDLILRSVAVVATVGSAI
AMGTTNQTLPFFTQFLRFKAQYSDLPTLTFFVVVNSIVAAYLVLSIPLSIVHIMASSAKY
SRLVLVFFDAAMLLALVTAAASAAAAIVYLAHKGNARANWLAICQQFDSFCERISGSLIG
SFAAMALLLLLILLSAAALARR

Transcript Sequence

Transcript ID

Zm00001d018029_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:5:212390087:212391281:-1 gene:Zm00001d018029 gene_biotype:protein_coding transcript_biotype:protein_coding description:Casparian strip membrane protein 5
Sequence

GTCCTGTCCAACATCCAGAGCAGTAAACCTCATCGAGGCGGCCACGATGGAGGACAGCAA
AGCCCCGGTGTCGGAGCACGGCGGGGAGACCTCCAAGGCCGCGGTGCTCGTGGGGGTGGC
CGCCGGCAGCGGGGGACGCAGGGGCAGGGCGGCTACCCGCGTTCTGGCCGTGGTCGACCT
CATCCTCCGCTCCGTCGCGGTGGTCGCCACCGTCGGCAGCGCCATCGCCATGGGCACCAC
CAACCAGACGCTGCCCTTCTTCACGCAGTTCCTCCGGTTCAAGGCGCAGTACAGCGATCT
CCCGACCCTTACGTTCTTCGTGGTGGTGAACTCGATCGTCGCCGCGTACCTGGTGCTGTC
CATACCCCTGTCCATCGTGCACATCATGGCGAGCAGCGCGAAGTACAGTAGGCTGGTCTT
GGTTTTCTTTGATGCGGCAATGCTGCTGGCGCTGGTGACGGCGGCGGCGTCGGCGGCCGC
GGCGATCGTGTACCTGGCGCACAAGGGCAACGCCAGGGCCAACTGGCTCGCCATCTGCCA
GCAGTTCGACTCCTTCTGCGAGCGCATCTCCGGCTCCCTCATCGGCTCATTCGCGGCCAT
GGCTCTGCTCCTTTTGCTCATACTCCTCTCCGCCGCCGCATTGGCGCGGCGTTAGATGGC
CACACCTGAGTGGCCAGGCGTACCCTGCTCTGGTCGCGTGCAAGGCGTTGCATTGCATGT
GCGTGCGTACTGGTCACCGTAACATGACGTGCTCGTGCAAAGGTGGCTTACAAATAAGGC
ACTAGTGTCGTGTCTTTGTGCAAAGGTTGCGGTACATCGTGAAAAGACTCACATCTTGTA
GTCTTTTTTTTTTGTTTTTCAGTTTGGACCTTATTCTTAAGTTATTATTCA