Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d018019_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:5:212215701:212217938:-1 gene:Zm00001d018019 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative pentatricopeptide repeat-containing protein
Sequence	ATGTCCCGCCCGCTCAGCAGCCAGTACGCCGCCCTCCTCTCTGCCGCCGCCCGGACCGAG CCGCACGCAGCCGGCGCGCTCCACTGCGTCATCCTCAGGACCCTACCGCACCCGCCGCCC ACCCACCTCCTCAACCACCTGCTCACCGCCTATGGCAAGGCTGGCCGCCACGCGCGCGCG CGCCGCGTGTTCGACGCAACGCCCCACCCGAACCTCTTCACATACAACGCGCTCCTCTCC ACTCTCGCCCACGCCAGGCTCCTCGACGACATGGACTCCCTCTTCGCGTCCATGGCGCAG CGCGACACCGTCTCCTACAACGCGGTCATCGCCGGCTTCTCTGGCGGTGGCGCGCACGCT CGGGCGGTCAGGTTGTACCACACGTTACTTCGGGCGGGCAGTAGCGTCAGGCCTAGCCGG ATCACGATGTCGGCTATGGTCATGGCGGCATCGGCCTTGGGTGACCGCGCCCTTGGCAGG CAGTTTCATTGTCAGATTCTGCGGCTTGGGTTTGGGGTGAACGCCTTTGTCGGGAGCCCA CTGGTTGGTATGTATGCCAAGATGGGTCTCATTGGGGATGCTAAGAGAGTCTTCGATGAA ATGGATGGCAAGAATGTGGTGATGTATAACACGATGATCACCGGGCTGCTCCGATGCAAG ATGGTTGAAGAAGCAAGGCGGTTGTTTGAGGTGATGACGGACAGGGATTGCATTACTTGG ACCACGATGGTCACGGGGTTCACACAGAACGGATTGGAGTCACAGGCTCTTAACTTTTTT AGGAGGATGAGGTTTCAGGGCATTGCTATTGATCAGTACACCTTCGGAAGCATCCTTACC GCCTGTGGTGCCCTTTCAGCCTTGGAACAGGGGAAACAGATCCATGCCTACATAATCAGG ACTCACTACGATGACAATGTCTTTGTCGGGAGTGCGCTTGTTGACATGTACTCAAAGTGC AGGAGCATCAAACCGGCAGAAACTGCTTTCAGGAGGATGTCGTGCAAAAACATCATCTCA TGGACTGCACTGATTGTTGGTTATGGACAAAATGGGTGCAGCGAGGAGGCTGTCAGGGTG TTCTCTGAGATGCAAAGAGATGGCATTGATCCTGATGATTTCACCCTAGGAAGTGTTATA AGTTCTTGCGCTAACCTAGCAAGCCTAGAGGAAGGAGCTCAGTTCCACTGTCTAGCGCTT GTGTCAGGATTGATGCATTACATCACAGTGTCTAATGCACTAGTTACCTTGTATGGGAAG TGTGGTAGCATTGAGGATGCACACAGATTGTTTGATGAGATGTTGTTTCACGATCAGGTC TCCTGGACAGCACTTGTCACTGGGTACGCTCAGTTTGGGAGGGCAAAAGAAACTATTGAT TTGTTCGAGAAGATGTTGGCTAAGGACGTGAAGCCTGATGGAGTAACCTTTATCGGTGTT CTTTCTGCTTGCAGTCGTGCGGGGTTTGTTGAGAAAGGTTGCAGCTACTTCCATTCCATG CAGAAGGACCATGGTATTGTTCCCATAGATGATCACTATACCTGTATGATTGACTTGTAT AGCAGATCTGGGAGATTAAAAGAAGCTGAGGAGTTCATAAAGCAGATGCCAATGCACCCT GATGCAATTGGATGGGGGACATTGCTGAGTGCTTGCAGGTTGCGGGGCGACATGGAAATT GGCCAATGGGCTGCTGAGAATCTCTTAGAGATCGATCCCCAGAATCCAGCAAGCTACGTG TTGCTATGCAGCATGCATGCTACTAAAGGTAACTGGAATCAGGTTGCCCAGCTAAGGCGT GGAATGAGGGACAGGCAAGTGAAGAAGGAGCCAGGTTGTAGCTGGATCAAATATAAGAAT AAAGTTCACATATTTTCTGCTGATGACCAGTCCCACCCCTTCTCCAAGGGAATTTATGAA AAGCTCGAGTGGCTCAACTCCAAGATGCTTGAAGAAGGATACAAACCTGATGTCAGTTCA GTGCTGCATGATGTTGCAGATACTGATAAGGTTCACATGGTCAGCCATCACAGTGAGAAG CTTGCGATTGCCTTCGGATTAATGTTTGTTCCACATGAAATGCCAATTCGTATTGTCAAG AATCTGCGGGTTTGTGTAGATTGTCACAATGCTACAAAGCTTATATCTAAGATTACTGGG CGTGATATTCTTGTGAGGGATGCTGTCAGATTTCACAAGTTCAGCAACGGGGTTTGCTCT TGTGGAGACTTCTGGTGA

Peptide Sequence

PEP ID	Zm00001d018019_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:5:212215701:212217938:-1 gene:Zm00001d018019 transcript:Zm00001d018019_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative pentatricopeptide repeat-containing protein
Sequence	MSRPLSSQYAALLSAAARTEPHAAGALHCVILRTLPHPPPTHLLNHLLTAYGKAGRHARA RRVFDATPHPNLFTYNALLSTLAHARLLDDMDSLFASMAQRDTVSYNAVIAGFSGGGAHA RAVRLYHTLLRAGSSVRPSRITMSAMVMAASALGDRALGRQFHCQILRLGFGVNAFVGSP LVGMYAKMGLIGDAKRVFDEMDGKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDCITW TTMVTGFTQNGLESQALNFFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIR THYDDNVFVGSALVDMYSKCRSIKPAETAFRRMSCKNIISWTALIVGYGQNGCSEEAVRV FSEMQRDGIDPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGK CGSIEDAHRLFDEMLFHDQVSWTALVTGYAQFGRAKETIDLFEKMLAKDVKPDGVTFIGV LSACSRAGFVEKGCSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGRLKEAEEFIKQMPMHP DAIGWGTLLSACRLRGDMEIGQWAAENLLEIDPQNPASYVLLCSMHATKGNWNQVAQLRR GMRDRQVKKEPGCSWIKYKNKVHIFSADDQSHPFSKGIYEKLEWLNSKMLEEGYKPDVSS VLHDVADTDKVHMVSHHSEKLAIAFGLMFVPHEMPIRIVKNLRVCVDCHNATKLISKITG RDILVRDAVRFHKFSNGVCSCGDFW

Transcript Sequence

Transcript ID	Zm00001d018019_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:212215701:212217938:-1 gene:Zm00001d018019 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative pentatricopeptide repeat-containing protein
Sequence	ATGTCCCGCCCGCTCAGCAGCCAGTACGCCGCCCTCCTCTCTGCCGCCGCCCGGACCGAG CCGCACGCAGCCGGCGCGCTCCACTGCGTCATCCTCAGGACCCTACCGCACCCGCCGCCC ACCCACCTCCTCAACCACCTGCTCACCGCCTATGGCAAGGCTGGCCGCCACGCGCGCGCG CGCCGCGTGTTCGACGCAACGCCCCACCCGAACCTCTTCACATACAACGCGCTCCTCTCC ACTCTCGCCCACGCCAGGCTCCTCGACGACATGGACTCCCTCTTCGCGTCCATGGCGCAG CGCGACACCGTCTCCTACAACGCGGTCATCGCCGGCTTCTCTGGCGGTGGCGCGCACGCT CGGGCGGTCAGGTTGTACCACACGTTACTTCGGGCGGGCAGTAGCGTCAGGCCTAGCCGG ATCACGATGTCGGCTATGGTCATGGCGGCATCGGCCTTGGGTGACCGCGCCCTTGGCAGG CAGTTTCATTGTCAGATTCTGCGGCTTGGGTTTGGGGTGAACGCCTTTGTCGGGAGCCCA CTGGTTGGTATGTATGCCAAGATGGGTCTCATTGGGGATGCTAAGAGAGTCTTCGATGAA ATGGATGGCAAGAATGTGGTGATGTATAACACGATGATCACCGGGCTGCTCCGATGCAAG ATGGTTGAAGAAGCAAGGCGGTTGTTTGAGGTGATGACGGACAGGGATTGCATTACTTGG ACCACGATGGTCACGGGGTTCACACAGAACGGATTGGAGTCACAGGCTCTTAACTTTTTT AGGAGGATGAGGTTTCAGGGCATTGCTATTGATCAGTACACCTTCGGAAGCATCCTTACC GCCTGTGGTGCCCTTTCAGCCTTGGAACAGGGGAAACAGATCCATGCCTACATAATCAGG ACTCACTACGATGACAATGTCTTTGTCGGGAGTGCGCTTGTTGACATGTACTCAAAGTGC AGGAGCATCAAACCGGCAGAAACTGCTTTCAGGAGGATGTCGTGCAAAAACATCATCTCA TGGACTGCACTGATTGTTGGTTATGGACAAAATGGGTGCAGCGAGGAGGCTGTCAGGGTG TTCTCTGAGATGCAAAGAGATGGCATTGATCCTGATGATTTCACCCTAGGAAGTGTTATA AGTTCTTGCGCTAACCTAGCAAGCCTAGAGGAAGGAGCTCAGTTCCACTGTCTAGCGCTT GTGTCAGGATTGATGCATTACATCACAGTGTCTAATGCACTAGTTACCTTGTATGGGAAG TGTGGTAGCATTGAGGATGCACACAGATTGTTTGATGAGATGTTGTTTCACGATCAGGTC TCCTGGACAGCACTTGTCACTGGGTACGCTCAGTTTGGGAGGGCAAAAGAAACTATTGAT TTGTTCGAGAAGATGTTGGCTAAGGACGTGAAGCCTGATGGAGTAACCTTTATCGGTGTT CTTTCTGCTTGCAGTCGTGCGGGGTTTGTTGAGAAAGGTTGCAGCTACTTCCATTCCATG CAGAAGGACCATGGTATTGTTCCCATAGATGATCACTATACCTGTATGATTGACTTGTAT AGCAGATCTGGGAGATTAAAAGAAGCTGAGGAGTTCATAAAGCAGATGCCAATGCACCCT GATGCAATTGGATGGGGGACATTGCTGAGTGCTTGCAGGTTGCGGGGCGACATGGAAATT GGCCAATGGGCTGCTGAGAATCTCTTAGAGATCGATCCCCAGAATCCAGCAAGCTACGTG TTGCTATGCAGCATGCATGCTACTAAAGGTAACTGGAATCAGGTTGCCCAGCTAAGGCGT GGAATGAGGGACAGGCAAGTGAAGAAGGAGCCAGGTTGTAGCTGGATCAAATATAAGAAT AAAGTTCACATATTTTCTGCTGATGACCAGTCCCACCCCTTCTCCAAGGGAATTTATGAA AAGCTCGAGTGGCTCAACTCCAAGATGCTTGAAGAAGGATACAAACCTGATGTCAGTTCA GTGCTGCATGATGTTGCAGATACTGATAAGGTTCACATGGTCAGCCATCACAGTGAGAAG CTTGCGATTGCCTTCGGATTAATGTTTGTTCCACATGAAATGCCAATTCGTATTGTCAAG AATCTGCGGGTTTGTGTAGATTGTCACAATGCTACAAAGCTTATATCTAAGATTACTGGG CGTGATATTCTTGTGAGGGATGCTGTCAGATTTCACAAGTTCAGCAACGGGGTTTGCTCT TGTGGAGACTTCTGGTGA