Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d017982_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:5:211334503:211343257:1 gene:Zm00001d017982 gene_biotype:protein_coding transcript_biotype:protein_coding description:DExH-box ATP-dependent RNA helicase DExH15 chloroplastic
Sequence	ATGCACTGCATCGCCCCCCGCCTGCTCCTCCTCCCGCTCCCGACCGTCTCCCGCCACGCG CTATCGCCAACCCAGACGCCACCTCTTCCTCCCCTCCTCCCCTCCCGCGCCTGTAAGTTC CACCTCGCCTCGGCGCGCTCGCCGTCCCGCGCCGCCGCTTCGGTTTCCGGCGACGACGAG GATGAGGAGGTTGACGTGGATGACGACGAGGACGACGAGACAACCATCCGCAACGTAGAC GATGAATACGACGACGATTTCGAGGACGGGGATGAGGGAGATGAGGGCGATGAGGAGGCG GTGGACGAGGAGAGCGGTGGTGAGTACGAGGAAGAGGCGGGGGAGGACGAGGACAAGCGG GAGGATACCGCAGCGCGGAGGCGGGACTCGGAGGAGTATAAGTCGCGGCGGGTGGCGAAG CTGGTCGCCGAGGTGCGGGAGTTCGGGGAGGACGTCATCGACTACAACGAGCTCGCCGGG ATCTACGACTTCCCCATCGACAAGTTTCAGCGCTTGGCTATACAAGCATTTTTAAGAGGT TCATCTGTTGTAGTTTCTGCACCTACAAGTAGTGGGAAAACATTAATAGCAGAAGCTGCA GCAGTTGCAACAGTAGCAAGAGGAAGGCGTCTCTTCTACACAACACCATTAAAGGCATTG TCAAACCAGAAGTTCCGTGATTTCCGGAATACCTTCGGTGATCATAATGTTGGCCTTCTT ACAGGAGATTCTGCTATCAACAAAGATGCTCAGATCCTAATCATGACAACAGAGATTTTA CGTAACATGCTGTACCAAAGTGTTGGCATGACAGCCTCTGAAGGTAGATTATTTCAAGTT GATGTCATTGTTTTGGATGAAGTCCATTATTTGAGTGATATCTCACGTGGCACTGTTTGG GAAGAAACTGTCATATATTGTCCAAAGGAAGTCCAACTTATATGTCTGTCAGCCACTGTT GCAAATCCTGATGAATTAGCTGGCTGGATAAGTCAGATTCATGGTAAAACAGAGCTTGTA ACATCGAACAAACGTCCAGTTCCGCTTACTTGGCACTTCTCGAAGAAATATTCATTACAA CCGCTTCTTGATGGAAAGGGGAAAAAAATGAATAGGAAACTGCGGATGTCTAACTCCCAA AACTTAGCATCTCCAAAGAGTGAGTTCTATTATGTGAAAGGGAAGAGGAGGTTTAGAACA AATAAAATTGAGCAAGGTAATAGCAGGCCTTTGGACATATCGAAACAGGTTCAGTTATCA AAGCATGAACTCAGCAATATGCGTCGTTCCCAAGTTCCACTAATACGTGACACTTTATCA CAACTATGGGAAAATGGCATGCTTCCAGCTATCTGGTTTATTTTTAGTAGAAGAGGGTGT GATGCAGCTGTTGAGTACCTTGAGGATTGCAGACTGTTGCATGACTGTGAGGCTAGTGAA GTTGAGCTGGAACTTAGGAGGTTCAAGATGCAATATCCTGATGCTATTCGAGAAAGTGCT GTGAAAGGACTCATGCGAGGAGTTGCGGCCCATCATGCTGGTTGCTTGCCACTGTGGAAA TCATTTATTGAAGAATTATTTCAACGTGGCCTTGTTAAAGTAGTTTTTGCGACAGAAACC CTTGCAGCTGGGATTAATATGCCTGCCAGGACGGCTGTAATTTCTTCTCTCAGTAAAAGA ATAGATGCTGGGCGCCAGCTCTTAACCCCGAATGAACTATTCCAGATGGCAGGTCGTGCT GGAAGGAGAGGGATTGATACAGTTGGGCATGCTGTTCTTGTTCAGACTCCATATGAAGGG CCTGAAGAGTGTTGTGACATCATCTTTGCCGGACTTGAGCCACTTGTCTCACAATTCACT GCATCATATGGGATGGTTTTGAATCTTCTTGCCGGTTCAAAAGTTACACATAAACAGAAA GAATCGGATGATGTTAAGGACAAGCATTCTGGAAGAACCTTAGAAGAAGCTCGAAAGCTA GTGGAGCAAAGCTTTGGGAATTATGTTGGTAGCAATGTAATGGTTGCTGCCAAAGAAGAG ACTGAAAGAATAAGGCAAGAAATACAATACCTCTCTTCAGAAATTACTGATGAATCTATT GATCGAAAATGCAGGGAAGAATTATCAGAAGAAGACTATGCTGAGATTTCCCTCCTACAG AAGAGACTAAAGGAAGAGAAGCAGATCAGAAATGAGCTGAAAAAAAAGATGGAACTGGAG AGAATGGCTGCATGGAAAAATCGGTTAGAGGAATTTGAAAGTGGCCATCTTCCTTTCATG TGCCTGCAATACAAAGATAAGGATTCAATTCAGCACACGATCCCTGCTGTATTTATTGGA AACCTCAACTCATTTGCTGATCAAAAGATCATGAACATGGTGGAAGATGATTCACTTGTT TCTGGCAAGCCGAAACGTGATAGTGGGGAACAACTTTATCGCCCATCTTACTATGTAGCT TTAAGTTCAGATAATTCATGGTATCTGTTCACAGAAAAATGGATTAAAACTGTTTACAAG ACAGGTCTACCTGCTGTCCCTTCTGTTGAAGGGGGCACACTCCCTAGAGAAACCCTGAAA CAGCTCCTCCTGCGTGAAGAGTTGGTGTGGGATAAAGTTGAAAAATCAGAATACGGCTCT TTGTTAAGCATGGAAGGTTCTTTAGACACATGGTCGTGGAGTCTCAATGTTCCTGTGCTT AATAGCCTTTCGGAAGACAATGAGGTAGAACGATTCTCCCAGGAACATCAAGATGCTGTA GAATGCTACAAGCAACAGAGGAGGAAGGTTTCACATTTAAAGAAAACAATAAAGGCTACT AGGGGTTTCAAAGAATTCCAAAAGATCATCGACATGAGAAATTTTACAAAAGAGAAGATT GAGCGCTTAGAAGCTAGATCCCGTCGCTTGACTCGACGAATAAGACAAATTGAACCGACC GGTTGGAAAGAATTTCTCCAGATTAGCAAAGTCATACAAGAGGCTAGAGCATTGGATATC AATACTCAGGTAATCTATCCTTTGGGTGAGACGGCAGCGGCTATACGAGGGGAAAATGAG CTATGGCTTGCTATGGTTCTTAGGAACAAGGTCCTCTTGGATCTAAAGCCATCTCAACTG GCAGCAGTTTGTGGAAGTTTAGTTTCCGAAGGGATCAAACTTCGTCCTTGGAAAAATAGC AGCTATGTATATGAACCTTCTTCTGTTGTTACTGGTGTTATAAGTTATTTAGAAGAGCAG AGAAATTCGCTAATCGATCTCCAAGAGAGACATAGTGTTAAGATACCTTGCGAAATAGAT GCCCAGTTTGCTGGGATGGTTGAAGCCTGGGCTTCAGGACTGACTTGGAGGGAGATAATG ATGGACTCTGCAATGGACGATGGAGATTTAGCCCGTCTACTCAGGCGCTCTATAGATTTA CTAGCTCAGATTCCCAAACTGCCAGACATTGATCCGGTTCTCCAAAAGAATGCACAAATT GCTTGCAGCGTCATGGACCGAGTACCGATTAGTGAGCTTGCCGGTTGA

Peptide Sequence

PEP ID	Zm00001d017982_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:5:211334503:211343257:1 gene:Zm00001d017982 transcript:Zm00001d017982_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:DExH-box ATP-dependent RNA helicase DExH15 chloroplastic
Sequence	MHCIAPRLLLLPLPTVSRHALSPTQTPPLPPLLPSRACKFHLASARSPSRAAASVSGDDE DEEVDVDDDEDDETTIRNVDDEYDDDFEDGDEGDEGDEEAVDEESGGEYEEEAGEDEDKR EDTAARRRDSEEYKSRRVAKLVAEVREFGEDVIDYNELAGIYDFPIDKFQRLAIQAFLRG SSVVVSAPTSSGKTLIAEAAAVATVARGRRLFYTTPLKALSNQKFRDFRNTFGDHNVGLL TGDSAINKDAQILIMTTEILRNMLYQSVGMTASEGRLFQVDVIVLDEVHYLSDISRGTVW EETVIYCPKEVQLICLSATVANPDELAGWISQIHGKTELVTSNKRPVPLTWHFSKKYSLQ PLLDGKGKKMNRKLRMSNSQNLASPKSEFYYVKGKRRFRTNKIEQGNSRPLDISKQVQLS KHELSNMRRSQVPLIRDTLSQLWENGMLPAIWFIFSRRGCDAAVEYLEDCRLLHDCEASE VELELRRFKMQYPDAIRESAVKGLMRGVAAHHAGCLPLWKSFIEELFQRGLVKVVFATET LAAGINMPARTAVISSLSKRIDAGRQLLTPNELFQMAGRAGRRGIDTVGHAVLVQTPYEG PEECCDIIFAGLEPLVSQFTASYGMVLNLLAGSKVTHKQKESDDVKDKHSGRTLEEARKL VEQSFGNYVGSNVMVAAKEETERIRQEIQYLSSEITDESIDRKCREELSEEDYAEISLLQ KRLKEEKQIRNELKKKMELERMAAWKNRLEEFESGHLPFMCLQYKDKDSIQHTIPAVFIG NLNSFADQKIMNMVEDDSLVSGKPKRDSGEQLYRPSYYVALSSDNSWYLFTEKWIKTVYK TGLPAVPSVEGGTLPRETLKQLLLREELVWDKVEKSEYGSLLSMEGSLDTWSWSLNVPVL NSLSEDNEVERFSQEHQDAVECYKQQRRKVSHLKKTIKATRGFKEFQKIIDMRNFTKEKI ERLEARSRRLTRRIRQIEPTGWKEFLQISKVIQEARALDINTQVIYPLGETAAAIRGENE LWLAMVLRNKVLLDLKPSQLAAVCGSLVSEGIKLRPWKNSSYVYEPSSVVTGVISYLEEQ RNSLIDLQERHSVKIPCEIDAQFAGMVEAWASGLTWREIMMDSAMDDGDLARLLRRSIDL LAQIPKLPDIDPVLQKNAQIACSVMDRVPISELAG

Transcript Sequence

Transcript ID	Zm00001d017982_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:211334503:211343257:1 gene:Zm00001d017982 gene_biotype:protein_coding transcript_biotype:protein_coding description:DExH-box ATP-dependent RNA helicase DExH15 chloroplastic
Sequence	CCCCGGCTCTAAGGGCTCTTCTACACCGAAGCACCGCACCTCCCGCCATGCACTGCATCG CCCCCCGCCTGCTCCTCCTCCCGCTCCCGACCGTCTCCCGCCACGCGCTATCGCCAACCC AGACGCCACCTCTTCCTCCCCTCCTCCCCTCCCGCGCCTGTAAGTTCCACCTCGCCTCGG CGCGCTCGCCGTCCCGCGCCGCCGCTTCGGTTTCCGGCGACGACGAGGATGAGGAGGTTG ACGTGGATGACGACGAGGACGACGAGACAACCATCCGCAACGTAGACGATGAATACGACG ACGATTTCGAGGACGGGGATGAGGGAGATGAGGGCGATGAGGAGGCGGTGGACGAGGAGA GCGGTGGTGAGTACGAGGAAGAGGCGGGGGAGGACGAGGACAAGCGGGAGGATACCGCAG CGCGGAGGCGGGACTCGGAGGAGTATAAGTCGCGGCGGGTGGCGAAGCTGGTCGCCGAGG TGCGGGAGTTCGGGGAGGACGTCATCGACTACAACGAGCTCGCCGGGATCTACGACTTCC CCATCGACAAGTTTCAGCGCTTGGCTATACAAGCATTTTTAAGAGGTTCATCTGTTGTAG TTTCTGCACCTACAAGTAGTGGGAAAACATTAATAGCAGAAGCTGCAGCAGTTGCAACAG TAGCAAGAGGAAGGCGTCTCTTCTACACAACACCATTAAAGGCATTGTCAAACCAGAAGT TCCGTGATTTCCGGAATACCTTCGGTGATCATAATGTTGGCCTTCTTACAGGAGATTCTG CTATCAACAAAGATGCTCAGATCCTAATCATGACAACAGAGATTTTACGTAACATGCTGT ACCAAAGTGTTGGCATGACAGCCTCTGAAGGTAGATTATTTCAAGTTGATGTCATTGTTT TGGATGAAGTCCATTATTTGAGTGATATCTCACGTGGCACTGTTTGGGAAGAAACTGTCA TATATTGTCCAAAGGAAGTCCAACTTATATGTCTGTCAGCCACTGTTGCAAATCCTGATG AATTAGCTGGCTGGATAAGTCAGATTCATGGTAAAACAGAGCTTGTAACATCGAACAAAC GTCCAGTTCCGCTTACTTGGCACTTCTCGAAGAAATATTCATTACAACCGCTTCTTGATG GAAAGGGGAAAAAAATGAATAGGAAACTGCGGATGTCTAACTCCCAAAACTTAGCATCTC CAAAGAGTGAGTTCTATTATGTGAAAGGGAAGAGGAGGTTTAGAACAAATAAAATTGAGC AAGGTAATAGCAGGCCTTTGGACATATCGAAACAGGTTCAGTTATCAAAGCATGAACTCA GCAATATGCGTCGTTCCCAAGTTCCACTAATACGTGACACTTTATCACAACTATGGGAAA ATGGCATGCTTCCAGCTATCTGGTTTATTTTTAGTAGAAGAGGGTGTGATGCAGCTGTTG AGTACCTTGAGGATTGCAGACTGTTGCATGACTGTGAGGCTAGTGAAGTTGAGCTGGAAC TTAGGAGGTTCAAGATGCAATATCCTGATGCTATTCGAGAAAGTGCTGTGAAAGGACTCA TGCGAGGAGTTGCGGCCCATCATGCTGGTTGCTTGCCACTGTGGAAATCATTTATTGAAG AATTATTTCAACGTGGCCTTGTTAAAGTAGTTTTTGCGACAGAAACCCTTGCAGCTGGGA TTAATATGCCTGCCAGGACGGCTGTAATTTCTTCTCTCAGTAAAAGAATAGATGCTGGGC GCCAGCTCTTAACCCCGAATGAACTATTCCAGATGGCAGGTCGTGCTGGAAGGAGAGGGA TTGATACAGTTGGGCATGCTGTTCTTGTTCAGACTCCATATGAAGGGCCTGAAGAGTGTT GTGACATCATCTTTGCCGGACTTGAGCCACTTGTCTCACAATTCACTGCATCATATGGGA TGGTTTTGAATCTTCTTGCCGGTTCAAAAGTTACACATAAACAGAAAGAATCGGATGATG TTAAGGACAAGCATTCTGGAAGAACCTTAGAAGAAGCTCGAAAGCTAGTGGAGCAAAGCT TTGGGAATTATGTTGGTAGCAATGTAATGGTTGCTGCCAAAGAAGAGACTGAAAGAATAA GGCAAGAAATACAATACCTCTCTTCAGAAATTACTGATGAATCTATTGATCGAAAATGCA GGGAAGAATTATCAGAAGAAGACTATGCTGAGATTTCCCTCCTACAGAAGAGACTAAAGG AAGAGAAGCAGATCAGAAATGAGCTGAAAAAAAAGATGGAACTGGAGAGAATGGCTGCAT GGAAAAATCGGTTAGAGGAATTTGAAAGTGGCCATCTTCCTTTCATGTGCCTGCAATACA AAGATAAGGATTCAATTCAGCACACGATCCCTGCTGTATTTATTGGAAACCTCAACTCAT TTGCTGATCAAAAGATCATGAACATGGTGGAAGATGATTCACTTGTTTCTGGCAAGCCGA AACGTGATAGTGGGGAACAACTTTATCGCCCATCTTACTATGTAGCTTTAAGTTCAGATA ATTCATGGTATCTGTTCACAGAAAAATGGATTAAAACTGTTTACAAGACAGGTCTACCTG CTGTCCCTTCTGTTGAAGGGGGCACACTCCCTAGAGAAACCCTGAAACAGCTCCTCCTGC GTGAAGAGTTGGTGTGGGATAAAGTTGAAAAATCAGAATACGGCTCTTTGTTAAGCATGG AAGGTTCTTTAGACACATGGTCGTGGAGTCTCAATGTTCCTGTGCTTAATAGCCTTTCGG AAGACAATGAGGTAGAACGATTCTCCCAGGAACATCAAGATGCTGTAGAATGCTACAAGC AACAGAGGAGGAAGGTTTCACATTTAAAGAAAACAATAAAGGCTACTAGGGGTTTCAAAG AATTCCAAAAGATCATCGACATGAGAAATTTTACAAAAGAGAAGATTGAGCGCTTAGAAG CTAGATCCCGTCGCTTGACTCGACGAATAAGACAAATTGAACCGACCGGTTGGAAAGAAT TTCTCCAGATTAGCAAAGTCATACAAGAGGCTAGAGCATTGGATATCAATACTCAGGTAA TCTATCCTTTGGGTGAGACGGCAGCGGCTATACGAGGGGAAAATGAGCTATGGCTTGCTA TGGTTCTTAGGAACAAGGTCCTCTTGGATCTAAAGCCATCTCAACTGGCAGCAGTTTGTG GAAGTTTAGTTTCCGAAGGGATCAAACTTCGTCCTTGGAAAAATAGCAGCTATGTATATG AACCTTCTTCTGTTGTTACTGGTGTTATAAGTTATTTAGAAGAGCAGAGAAATTCGCTAA TCGATCTCCAAGAGAGACATAGTGTTAAGATACCTTGCGAAATAGATGCCCAGTTTGCTG GGATGGTTGAAGCCTGGGCTTCAGGACTGACTTGGAGGGAGATAATGATGGACTCTGCAA TGGACGATGGAGATTTAGCCCGTCTACTCAGGCGCTCTATAGATTTACTAGCTCAGATTC CCAAACTGCCAGACATTGATCCGGTTCTCCAAAAGAATGCACAAATTGCTTGCAGCGTCA TGGACCGAGTACCGATTAGTGAGCTTGCCGGTTGAAAACTCAACCTGTAAGTACTACTAA CAGAGGGTTTACCTGGCTGCTTATTTTCCAATTGTTATAGACTTATAGCAGGCAATTCTT TGTTGTACCATGAAAAATAGTTAACAGTTGTCACAGTGAAATTCAAGAGCAGCTCATATC CCACTGACTAAACA