Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d017977_T013
CDS Infomation	cds chromosome:B73_RefGen_v4:5:211162334:211171624:1 gene:Zm00001d017977 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:histidine kinase1 description: histidine kinase1
Sequence	ATGGGGGGCAAGTACCGCGCGGCGAGGACGAAGAGGTGGTGGAGGGGGCTGGCAGCGGCC GGGTGGGTGCTAACCGCGGTGGTCTGCTCCGCGGTGATGCACTGGACCCTGCGCCGGGAC AGCATGGACCGCGCCGAGGAGCGCCTCGTCAGCATGTGCGAGGAGAGGGCCAGGATGCTG CAGGAGCAGTTCGGGGTCACCGTCAACCACGTCCACGCCATCGCCATTCTCATCTCCACC TTCAACTTCGAGAAGTCCCCTCCAGCCATCGACCAGGACACCTTTGCAAAATACACGGCA AGGACATCATTTGAGCGACCACTGCTCAATGGGGTGGCATTCGCACAGCGTGTATTCCAT CATGAGAGGGAAATGTTTGAAAGCCAGCAGGGATGGGTTATGAATACGATGCAGCGGGAG CCTGCACCTCCGCAGGTTGAATACGCCCCAGTGATTTTCTCTCAGGATACGGTTTCCTAC CTTGCACGCATTGACATGATGTCTGGGGAGGAGGACCGAGAAAACATTTTCCGGGCCAGG ACTACTGGCAAAGCTGTGTTAACAAACCCATTCCGGTTGCTTGGATCAAACCACTTGGGA GTAGTTCTCACGTTTGCTGTGTACCGCCCTGATCTCCCTGCTGATGCATCAGTTGAGCAA CGTGTGGAAGCAACTATTGGATATCTTGGTGGAGCCTTTGATGTGGAGTCACTTGTGGAG AATTTGTTGAGCAAACTTGCTGGCAATCAGGATATTGTGGTAAATGTCTATGATGTCACA AATGCTTCAGATGCTATGGTTTTGTATGGACCTTCAAGTTTGGACGAGCAAGTGCCTTTC TTGCATGTTAGCATGTTGGATTTTGGAGATCCATTTAGGAAGCATGAAATGAGATGCAGG TATAGACAAAAACTTCCTATGCCGTGGTCTGCCATCACCAATCCTTTGGGCACATTTGTC ATATGGATGCTTCTAGGGTATAGCATTGCTGCTGCATATTCTCGATATGACAAAGTTACT GAAGATTGCAGAAAGATGGAAGAGCTAAAAACACAGGCAGAAGCTGCTGATGTTGCAAAA TCTCAGTTCCTGGCAACTGTGTCACATGAGATCAGAACACCTATGAATGGCGTCCTTGGA ATGCTGGATATGCTTTTAGGAACAGATCTAACTATGACACAGAAGGATTATGCTCAAACT GCTCAAATGTGTGGCAGAGCATTGATTACACTGATAAATGATGTCCTTGATCGAGCAAAG ATCGAGGCTGGAAAGTTAGAGCTTGAAGCGGTGCCTTTTGACCTGCGTTCTCTCATGGAT GATGTTGTTTCCTTGTTTTCTTCAAAGTCACGGGAGAAGTGCATTGAGCTTGCAGTATTT GTATGTGACAATGTTCCAAAGGTTGTTATTGGAGATCCTTGGAGGTTTCGACAGATATTG ACAAATTTGGTCGGGAATGCAGTCAAATTCACAGAACGAGGTCATGTATTTGTGCGGGTC TGTTTGGCTGAAAACTCAAATGTGGAAGCCAATCAGGTCCTACATGGAGCCATGAATGGC AAAGGTGGTAGAGTTGAGTCAACAACTAATGGTGCCTTCAATACTTTGAGTGGGTTTGAA GCAGCAGACAGACGAAATAGTTGGCAATATTTTAAACTGCTCCTCTCCGATAAGGAGTCA CTTTTGGATGATCTTGAGGGCGAAAATTCTAATCAAAGTGATTCAAATCATGTCACACTA GCAATAAGTATTGAGGACACAGGTGTCGGGATACCACTGCAAGCACAAGATCGTGTTTTT ACACCGTTTATGCAGGCTGACAGTTCAACTTCAAGGAATTATGGCGGTACTGGCATCGGT TTAAGCATCAGCAAGTGTCTAGCTGAACTTATGGGTGGGCAGATAAGTTTCACTAGCCAT CCTTCTGTTGGAAGCACGTTCACTTTCTCAGCCACACTGAAGCACTCATACAAAGATATT TCGGTCGATTCAAGTAGGAGCTTGACAGAGGCACTACCAACTGCTTTTAAGGGAATGAAG GCCATCTTGGTAGATGGGAGACCTGTACGTAGTGCTGTTACAAGATATCACCTCAAGAGG TTGGGAATACTTCTTCAAGTTGTGAACAATATGAATGCAGTAGTAAAAGCTTTCCCAGGA CAAAATGGAGCAACCGGTTCTAGGGAAAAAGCATCAATTCTTTTTATTGAGAGTGACTTC TGGAGGCCTGAGACAGATGTTCAGTTATTGAACCATCTACGCGAGCAGAAGAACGGTCAG TTGTCGGATGGGCACAAGGTAGTTCTTTTGGTCACCTCTGAAGCCGACAAGGACAAATAT GGATCCATATTTGATATTGTGATGTGTAAGCCTATAAGGGCAAGCACAATCGCTTCATCT ATTCAACAACTGCTCAAAGTAGAGATAGCCGAAAGAAAAGATAATCAAAACCGGCCGTCG TTTCTTCGAAGCTTGCTGGTTGGGAAGAATATATTGGTCGTAGACGATAATAAAGTCAAC CTCAGAGTTGCTGCGGCTGCACTCAAGAAATATGGTGCTAATGTTAGCTGTGTTGAAAGC GGCAAGGATGCTATCAGTCTACTTCAACCCCCGCATCGCTTCGATGCATGTTTTATGGAT GTTCAGATGCCAGAGATGGACGGGTTTGAGGCAACCGGACAAATAAGGCAAATGGAGTTG AAAGCGAACGAGGAAAGGAAGAACAAGTTGGCTTCGATTGAAGGCTCGACAACTGCCGAG TACCATCTGCCTGTTCTGGCAATGACAGCCGATGTTATCCAGGCAACTTACGAAGAGTGC ATAAAATCGGGAATGGATGGATACGTATCTAAACCCTTCGACGAGGAGCAGCTATACCAA GCAGTCTCCAGATTGGTAGTGGGAACGACGGATTCGGCTGTTTGA

Peptide Sequence

PEP ID	Zm00001d017977_P013
PEP Infomation	pep chromosome:B73_RefGen_v4:5:211162334:211171624:1 gene:Zm00001d017977 transcript:Zm00001d017977_T013 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:histidine kinase1 description: histidine kinase1
Sequence	MGGKYRAARTKRWWRGLAAAGWVLTAVVCSAVMHWTLRRDSMDRAEERLVSMCEERARML QEQFGVTVNHVHAIAILISTFNFEKSPPAIDQDTFAKYTARTSFERPLLNGVAFAQRVFH HEREMFESQQGWVMNTMQREPAPPQVEYAPVIFSQDTVSYLARIDMMSGEEDRENIFRAR TTGKAVLTNPFRLLGSNHLGVVLTFAVYRPDLPADASVEQRVEATIGYLGGAFDVESLVE NLLSKLAGNQDIVVNVYDVTNASDAMVLYGPSSLDEQVPFLHVSMLDFGDPFRKHEMRCR YRQKLPMPWSAITNPLGTFVIWMLLGYSIAAAYSRYDKVTEDCRKMEELKTQAEAADVAK SQFLATVSHEIRTPMNGVLGMLDMLLGTDLTMTQKDYAQTAQMCGRALITLINDVLDRAK IEAGKLELEAVPFDLRSLMDDVVSLFSSKSREKCIELAVFVCDNVPKVVIGDPWRFRQIL TNLVGNAVKFTERGHVFVRVCLAENSNVEANQVLHGAMNGKGGRVESTTNGAFNTLSGFE AADRRNSWQYFKLLLSDKESLLDDLEGENSNQSDSNHVTLAISIEDTGVGIPLQAQDRVF TPFMQADSSTSRNYGGTGIGLSISKCLAELMGGQISFTSHPSVGSTFTFSATLKHSYKDI SVDSSRSLTEALPTAFKGMKAILVDGRPVRSAVTRYHLKRLGILLQVVNNMNAVVKAFPG QNGATGSREKASILFIESDFWRPETDVQLLNHLREQKNGQLSDGHKVVLLVTSEADKDKY GSIFDIVMCKPIRASTIASSIQQLLKVEIAERKDNQNRPSFLRSLLVGKNILVVDDNKVN LRVAAAALKKYGANVSCVESGKDAISLLQPPHRFDACFMDVQMPEMDGFEATGQIRQMEL KANEERKNKLASIEGSTTAEYHLPVLAMTADVIQATYEECIKSGMDGYVSKPFDEEQLYQ AVSRLVVGTTDSAV

Transcript Sequence

Transcript ID	Zm00001d017977_T013
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:211162334:211171624:1 gene:Zm00001d017977 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:histidine kinase1 description: histidine kinase1
Sequence	CCGCCCCGCTCCCCCTCCACCTCCAGGCTTCCTTCACAGTCTCGCTGTTGCTAGTGCTGC CTTGCTGCTAGTGATAGGGGTCCCGGGGCCCTCAAGTTCTGGGTGGGCGGCAAACATATG GTGGGCACCGGGCGGGGGAATAAGGAGGAAGAGAAAGAGGAGGAGGAGCGGCAGTAGATT TGGGCCGCACAGGCAGGGATGGGGGGCAAGTACCGCGCGGCGAGGACGAAGAGGTGGTGG AGGGGGCTGGCAGCGGCCGGGTGGGTGCTAACCGCGGTGGTCTGCTCCGCGGTGATGCAC TGGACCCTGCGCCGGGACAGCATGGACCGCGCCGAGGAGCGCCTCGTCAGCATGTGCGAG GAGAGGGCCAGGATGCTGCAGGAGCAGTTCGGGGTCACCGTCAACCACGTCCACGCCATC GCCATTCTCATCTCCACCTTCAACTTCGAGAAGTCCCCTCCAGCCATCGACCAGGACACC TTTGCAAAATACACGGCAAGGACATCATTTGAGCGACCACTGCTCAATGGGGTGGCATTC GCACAGCGTGTATTCCATCATGAGAGGGAAATGTTTGAAAGCCAGCAGGGATGGGTTATG AATACGATGCAGCGGGAGCCTGCACCTCCGCAGGTTGAATACGCCCCAGTGATTTTCTCT CAGGATACGGTTTCCTACCTTGCACGCATTGACATGATGTCTGGGGAGGAGGACCGAGAA AACATTTTCCGGGCCAGGACTACTGGCAAAGCTGTGTTAACAAACCCATTCCGGTTGCTT GGATCAAACCACTTGGGAGTAGTTCTCACGTTTGCTGTGTACCGCCCTGATCTCCCTGCT GATGCATCAGTTGAGCAACGTGTGGAAGCAACTATTGGATATCTTGGTGGAGCCTTTGAT GTGGAGTCACTTGTGGAGAATTTGTTGAGCAAACTTGCTGGCAATCAGGATATTGTGGTA AATGTCTATGATGTCACAAATGCTTCAGATGCTATGGTTTTGTATGGACCTTCAAGTTTG GACGAGCAAGTGCCTTTCTTGCATGTTAGCATGTTGGATTTTGGAGATCCATTTAGGAAG CATGAAATGAGATGCAGGTATAGACAAAAACTTCCTATGCCGTGGTCTGCCATCACCAAT CCTTTGGGCACATTTGTCATATGGATGCTTCTAGGGTATAGCATTGCTGCTGCATATTCT CGATATGACAAAGTTACTGAAGATTGCAGAAAGATGGAAGAGCTAAAAACACAGGCAGAA GCTGCTGATGTTGCAAAATCTCAGTTCCTGGCAACTGTGTCACATGAGATCAGAACACCT ATGAATGGCGTCCTTGGAATGCTGGATATGCTTTTAGGAACAGATCTAACTATGACACAG AAGGATTATGCTCAAACTGCTCAAATGTGTGGCAGAGCATTGATTACACTGATAAATGAT GTCCTTGATCGAGCAAAGATCGAGGCTGGAAAGTTAGAGCTTGAAGCGGTGCCTTTTGAC CTGCGTTCTCTCATGGATGATGTTGTTTCCTTGTTTTCTTCAAAGTCACGGGAGAAGTGC ATTGAGCTTGCAGTATTTGTATGTGACAATGTTCCAAAGGTTGTTATTGGAGATCCTTGG AGGTTTCGACAGATATTGACAAATTTGGTCGGGAATGCAGTCAAATTCACAGAACGAGGT CATGTATTTGTGCGGGTCTGTTTGGCTGAAAACTCAAATGTGGAAGCCAATCAGGTCCTA CATGGAGCCATGAATGGCAAAGGTGGTAGAGTTGAGTCAACAACTAATGGTGCCTTCAAT ACTTTGAGTGGGTTTGAAGCAGCAGACAGACGAAATAGTTGGCAATATTTTAAACTGCTC CTCTCCGATAAGGAGTCACTTTTGGATGATCTTGAGGGCGAAAATTCTAATCAAAGTGAT TCAAATCATGTCACACTAGCAATAAGTATTGAGGACACAGGTGTCGGGATACCACTGCAA GCACAAGATCGTGTTTTTACACCGTTTATGCAGGCTGACAGTTCAACTTCAAGGAATTAT GGCGGTACTGGCATCGGTTTAAGCATCAGCAAGTGTCTAGCTGAACTTATGGGTGGGCAG ATAAGTTTCACTAGCCATCCTTCTGTTGGAAGCACGTTCACTTTCTCAGCCACACTGAAG CACTCATACAAAGATATTTCGGTCGATTCAAGTAGGAGCTTGACAGAGGCACTACCAACT GCTTTTAAGGGAATGAAGGCCATCTTGGTAGATGGGAGACCTGTACGTAGTGCTGTTACA AGATATCACCTCAAGAGGTTGGGAATACTTCTTCAAGTTGTGAACAATATGAATGCAGTA GTAAAAGCTTTCCCAGGACAAAATGGAGCAACCGGTTCTAGGGAAAAAGCATCAATTCTT TTTATTGAGAGTGACTTCTGGAGGCCTGAGACAGATGTTCAGTTATTGAACCATCTACGC GAGCAGAAGAACGGTCAGTTGTCGGATGGGCACAAGGTAGTTCTTTTGGTCACCTCTGAA GCCGACAAGGACAAATATGGATCCATATTTGATATTGTGATGTGTAAGCCTATAAGGGCA AGCACAATCGCTTCATCTATTCAACAACTGCTCAAAGTAGAGATAGCCGAAAGAAAAGAT AATCAAAACCGGCCGTCGTTTCTTCGAAGCTTGCTGGTTGGGAAGAATATATTGGTCGTA GACGATAATAAAGTCAACCTCAGAGTTGCTGCGGCTGCACTCAAGAAATATGGTGCTAAT GTTAGCTGTGTTGAAAGCGGCAAGGATGCTATCAGTCTACTTCAACCCCCGCATCGCTTC GATGCATGTTTTATGGATGTTCAGATGCCAGAGATGGACGGGTTTGAGGCAACCGGACAA ATAAGGCAAATGGAGTTGAAAGCGAACGAGGAAAGGAAGAACAAGTTGGCTTCGATTGAA GGCTCGACAACTGCCGAGTACCATCTGCCTGTTCTGGCAATGACAGCCGATGTTATCCAG GCAACTTACGAAGAGTGCATAAAATCGGGAATGGATGGATACGTATCTAAACCCTTCGAC GAGGAGCAGCTATACCAAGCAGTCTCCAGATTGGTAGTGGGAACGACGGATTCGGCTGTT TGATGTTCAAAATACGATGGACCTGACTTCTCATTCATCGAAGTGAAGCATCACCATCTT GCCTCTGTCCAGCTGACTCTATATCCCTTGACAATGGGCCTCTGACATGGCCTCTCACAA GACTAGATGAAAAAAGAAGATGAAAGTGCCGTGAGTTAGGTACGTGTCACACATGACATG AAGTTGCTGCGGCAGCCCAGAGGAGTGTAGGTAGATCACCCTGTAACTCTCTTGTTCTTT GATGTTTATAGGCTGTTGTGTCTTCTGACAATTCATTGGAAATACCACATCTCGTTGCAA