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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d017958_T006
CDS Infomation

cds chromosome:B73_RefGen_v4:5:210867980:210871184:-1 gene:Zm00001d017958 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:glutamine synthetase4 description:Glutamine synthetase root isozyme 3

Sequence

ATGGCCTGCCTCACCGACCTCGTCAACCTCAACCTCTCGGACAACACCGAGAAGATCATC
GCGGAATACATATGGATCGGTGGATCTGGCATGGATCTCAGGAGCAAAGCAAGGACCCTC
TCCGGCCCGGTGACCGATCCCAGCAAGCTGCCCAAGTGGAACTACGACGGCTCCAGCACG
GGCCAGGCCCCCGGCGAGGACAGCGAGGTCATCCTGTACCCGCAGGCCATCTTCAAGGAC
CCATTCAGGAGGGGCAACAACATCCTTGTGATGTGCGATTGCTACACCCCAGCCGGCGAG
CCAATCCCCACCAACAAGAGGTACAACGCCGCCAAGATCTTCAGCAGCCCTGAGGTCGCC
GCCGAGGAGCCGTGGTATGGTATTGAGCAGGAGTACACCCTCCTCCAGAAGGACACCAAC
TGGCCCCTTGGGTGGCCCATCGGTGGCTTCCCCGGCCCTCAGGGTCCTTACTACTGTGGA
ATCGGCGCCGAAAAGTCGTTCGGCCGCGACATCGTGGACGCCCACTACAAGGCCTGCTTG
TATGCGGGCATCAACATCAGTGGCATCAACGGGGAGGTGATGCCAGGGCAGTGGGAGTTC
CAAGTCGGGCCTTCCGTGGGTATTTCTTCAGGCGACCAGGTCTGGGTCGCTCGCTACATT
CTTGAGAGGATCACGGAGATCGCCGGTGTGGTGGTGACGTTCGACCCGAAGCCGATCCCG
GGCGACTGGAACGGCGCCGGCGCGCACACCAACTACAGCACGGAGTCGATGAGGAAGGAG
GGCGGGTACGAGGTGATCAAGGCGGCCATCGAGAAGCTGAAGCTGCGGCACAGGGAGCAC
ATCGCGGCCTACGGCGAGGGCAACGAGCGCCGGTGCGCGTGGGCCGGGAGACGGAGCAGA
ACGGCAAGGGCTACTTCGAGGACCGCCGCCCGGCGTCCAACATGGACCCCTACGTGGTCA
CCTCCATGA

Peptide Sequence

PEP ID

Zm00001d017958_P006
PEP Infomation

pep chromosome:B73_RefGen_v4:5:210867980:210871184:-1 gene:Zm00001d017958 transcript:Zm00001d017958_T006 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:glutamine synthetase4 description:Glutamine synthetase root isozyme 3

Sequence

MACLTDLVNLNLSDNTEKIIAEYIWIGGSGMDLRSKARTLSGPVTDPSKLPKWNYDGSST
GQAPGEDSEVILYPQAIFKDPFRRGNNILVMCDCYTPAGEPIPTNKRYNAAKIFSSPEVA
AEEPWYGIEQEYTLLQKDTNWPLGWPIGGFPGPQGPYYCGIGAEKSFGRDIVDAHYKACL
YAGINISGINGEVMPGQWEFQVGPSVGISSGDQVWVARYILERITEIAGVVVTFDPKPIP
GDWNGAGAHTNYSTESMRKEGGYEVIKAAIEKLKLRHREHIAAYGEGNERRCAWAGRRSR
TARATSRTAARRPTWTPTWSPP

Transcript Sequence

Transcript ID

Zm00001d017958_T006
Transcript Infomation

cdna chromosome:B73_RefGen_v4:5:210867980:210871184:-1 gene:Zm00001d017958 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:glutamine synthetase4 description:Glutamine synthetase root isozyme 3

Sequence

TCTCAATCCCACACCACCACCACCACCTCCTCCGGTCCCCAACCCCTGTCGCACCGCAGC
CGCCGGCCATGGCCTGCCTCACCGACCTCGTCAACCTCAACCTCTCGGACAACACCGAGA
AGATCATCGCGGAATACATATGGATCGGTGGATCTGGCATGGATCTCAGGAGCAAAGCAA
GGACCCTCTCCGGCCCGGTGACCGATCCCAGCAAGCTGCCCAAGTGGAACTACGACGGCT
CCAGCACGGGCCAGGCCCCCGGCGAGGACAGCGAGGTCATCCTGTACCCGCAGGCCATCT
TCAAGGACCCATTCAGGAGGGGCAACAACATCCTTGTGATGTGCGATTGCTACACCCCAG
CCGGCGAGCCAATCCCCACCAACAAGAGGTACAACGCCGCCAAGATCTTCAGCAGCCCTG
AGGTCGCCGCCGAGGAGCCGTGGTATGGTATTGAGCAGGAGTACACCCTCCTCCAGAAGG
ACACCAACTGGCCCCTTGGGTGGCCCATCGGTGGCTTCCCCGGCCCTCAGGGTCCTTACT
ACTGTGGAATCGGCGCCGAAAAGTCGTTCGGCCGCGACATCGTGGACGCCCACTACAAGG
CCTGCTTGTATGCGGGCATCAACATCAGTGGCATCAACGGGGAGGTGATGCCAGGGCAGT
GGGAGTTCCAAGTCGGGCCTTCCGTGGGTATTTCTTCAGGCGACCAGGTCTGGGTCGCTC
GCTACATTCTTGAGAGGATCACGGAGATCGCCGGTGTGGTGGTGACGTTCGACCCGAAGC
CGATCCCGGGCGACTGGAACGGCGCCGGCGCGCACACCAACTACAGCACGGAGTCGATGA
GGAAGGAGGGCGGGTACGAGGTGATCAAGGCGGCCATCGAGAAGCTGAAGCTGCGGCACA
GGGAGCACATCGCGGCCTACGGCGAGGGCAACGAGCGCCGGTGCGCGTGGGCCGGGAGAC
GGAGCAGAACGGCAAGGGCTACTTCGAGGACCGCCGCCCGGCGTCCAACATGGACCCCTA
CGTGGTCACCTCCATGATCGCCGAGACCACCATCATCTGGAAGCCCTGAGCGCCGCGGCC
GTTGCGTTGCAGGGTCCCCGAAGCGATTGC