Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d017927_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:5:210209890:210212065:-1 gene:Zm00001d017927 gene_biotype:protein_coding transcript_biotype:protein_coding description:Fcf2 pre-rRNA processing protein
Sequence

ATGTCGGAGACGGCGGCGCCGATCGGCCTGTCATGGGCTCCCAAGCTTCCTTCCTTTGCA
ACGACCAGCGGCGGCAGCAAGATCGACCACGCGCCGGATCCGAGCACCGCGCAGGGCTCG
CTCTGGAAGCGCACGAGCGAGCTCGTGGACGGGCTGTTCGTGCCCCCGAGGGACCCTAGG
CAGCTGAATAAGCTGGCTAGGAAGAACGTCAAGGACACCGCCGGCAAGGGCTGGTTCGAC
ATGCCCGCGCCGACCATCACTCCCGAGTTGAAGAAGGATCTCGAGATTTTGCAGCTGAGG
CATGTAATTGACCCAAAAAGGCACTTCAAGCGGGCAGGAAAGTCCAAGGCCCTTCCCAAG
TACTTCCAAGTTGGTACGGTTGTTGAGCCTGCATCTGAGTTCTACTCAAGTAGGCTGAAA
AATAGGGAACGCAAGGCAACATTGGTGGACGAGCTGCTATCAGATCAATCTCTTAAGAGC
TACAGGATGCGCAAGGTACGGGAAATTCAGGAGATCCGTACACCAGGAGGCAACCAAAAG
TGGAAGAACAAGGGCAAGAAAACACTGAAGAGGGCGAAGGATAGGAGAAAATGA

Peptide Sequence

PEP ID

Zm00001d017927_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:5:210209890:210212065:-1 gene:Zm00001d017927 transcript:Zm00001d017927_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Fcf2 pre-rRNA processing protein
Sequence

MSETAAPIGLSWAPKLPSFATTSGGSKIDHAPDPSTAQGSLWKRTSELVDGLFVPPRDPR
QLNKLARKNVKDTAGKGWFDMPAPTITPELKKDLEILQLRHVIDPKRHFKRAGKSKALPK
YFQVGTVVEPASEFYSSRLKNRERKATLVDELLSDQSLKSYRMRKVREIQEIRTPGGNQK
WKNKGKKTLKRAKDRRK

Transcript Sequence

Transcript ID

Zm00001d017927_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:5:210209890:210212065:-1 gene:Zm00001d017927 gene_biotype:protein_coding transcript_biotype:protein_coding description:Fcf2 pre-rRNA processing protein
Sequence

GAAACCATTGAATTGATGGCCCAGAACGCACGAGCCTGCTAAACCTCCTGCCCTAGTCTC
CTCTCTGTCTCACAGCACAGCCCCTGCTTTCCCCCCACCGTCCCACGGCCGCCACGCCGC
CACGCTTCTTCTTCCCTTTCCCGTCCAACCTCCAACCCTGCCGGCTGCCGCGGCGGCGGA
TTAACACAATACCTTGGCGAGAGACGTAATAGTTTCTGAACTCACCGCGCTACGCCCGAT
GTCGGAGACGGCGGCGCCGATCGGCCTGTCATGGGCTCCCAAGCTTCCTTCCTTTGCAAC
GACCAGCGGCGGCAGCAAGATCGACCACGCGCCGGATCCGAGCACCGCGCAGGGCTCGCT
CTGGAAGCGCACGAGCGAGCTCGTGGACGGGCTGTTCGTGCCCCCGAGGGACCCTAGGCA
GCTGAATAAGCTGGCTAGGAAGAACGTCAAGGACACCGCCGGCAAGGGCTGGTTCGACAT
GCCCGCGCCGACCATCACTCCCGAGTTGAAGAAGGATCTCGAGATTTTGCAGCTGAGGCA
TGTAATTGACCCAAAAAGGCACTTCAAGCGGGCAGGAAAGTCCAAGGCCCTTCCCAAGTA
CTTCCAAGTTGGTACGGTTGTTGAGCCTGCATCTGAGTTCTACTCAAGTAGGCTGAAAAA
TAGGGAACGCAAGGCAACATTGGTGGACGAGCTGCTATCAGATCAATCTCTTAAGAGCTA
CAGGATGCGCAAGGTACGGGAAATTCAGGAGATCCGTACACCAGGAGGCAACCAAAAGTG
GAAGAACAAGGGCAAGAAAACACTGAAGAGGGCGAAGGATAGGAGAAAATGAGACTGGTG
CGCCCAGCTTTGTGCTCCAGTTGTGAGGGAACCAAGGAACGCCTTCAAGTCGCTCTAGTG
CTTTTCTCTCAACTTTGCAGTATAGATTCTGGTTCCAGTGTAGTGTTGTGGACTTCATGA
TGAATTGATTTGTATTTCTATAAATTTTATAATATTGCTGTAACAGCGGAATTCAGAAAT
ATGAGTTGGTAGACTCTTTCAAGTTAGCTAGCTTCATATATGGGAGAAGCACTGTCTCAG
CTCATTTT