Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d017915_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:5:210055877:210059325:1 gene:Zm00001d017915 gene_biotype:protein_coding transcript_biotype:protein_coding description:ribosomal RNA-processing protein
Sequence

ATGGGGAAATCCAAAGACAAGAAGGGTTCGCGGGAAGCGAAGGAGGACAAGAAATTGGCG
CTTGGGGTGAAGAGGAAGCAGCTGAAGAGGAAGAAGGACAGAGTGTTGGAATGTGCCGTC
GATAGCGAACCCGCTGCCGGGCATGGCGTTAAAGAAGAAAAAGAATTGCCAAGGAGAAAG
AAAATTCCATTGGTGAAGCAGAAGAAGAAAAATAAGCATGCCAATGTTAAGAGTAATCAT
GATACGGCAGATGCTGTGGTGGAATCACTGTCAGACAGTAAATATGATGCTCCACTGAAG
CTAAAGAAGAAGAGCAAAAAGAAGCAAATGGAAAGTAGCAGTCCTGCAGTCGTATATGAA
AGTTCAGTTGTTACTGAAGATGCTGGAGCACCTAAGCTGAAGAAAAAGAAAAGGAAGGTA
AAGGGAGGGAAGGCCTCTGCTGGGATTACTGACGCAGAAGAAATTCTGCATGAAAATCAA
AATGAAGAAACTAGTGCTGATATCAACCAACTTGCAGCACTGAGTGAAGATGTGGATAAT
GAAGAGCCTCAGAAATTAAAGCGGGGAAAGAAAATGGAAGTTAAAAAATCTGGGAAGGCC
AAGAAGAAAGACAAGCATGCATCGCGTAAAGATAATAACAACTTGGAGGGACATGTTGAT
GTTAGTGCTGCAAACGCTGATGAGATTCCATTAGTTGATGAAGACTGCTCTAGAGGAATG
AAAAAATGGATCTTGGAGTACAAACAGAAGAGACCTGGCTTGAAAGCCTTGCAGGAAGCA
ATAGATGAATTTATTGTTGCTCATGAGGAACAACAAGAGAAGGAGAAGAAAGAGAGAGAG
GCCCGCGCAGCAGAAGATGGATGGACAGTTGTGGTTCATCACAAGGGGAGGAAAAAGACC
ACAGATACTGAAACTGGAACGGCTGTTGGCTCTGTATCTCTTGGTGCAATGCAACATAAA
ATGGCTAAAATGAAACCCAAGGAAGTTGATATGAACTTCTACAGATTTCAGAAAAGAGAA
GCCCACCTCAGTGAACTGGCAATGTTGCAGAGCAAGTTCCAGCAGGATAAGAAAAGGATA
CAGGAACTTCGGGCCCAGAGGAAATTCAAGCCTTACTAA

Peptide Sequence

PEP ID

Zm00001d017915_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:5:210055877:210059325:1 gene:Zm00001d017915 transcript:Zm00001d017915_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:ribosomal RNA-processing protein
Sequence

MGKSKDKKGSREAKEDKKLALGVKRKQLKRKKDRVLECAVDSEPAAGHGVKEEKELPRRK
KIPLVKQKKKNKHANVKSNHDTADAVVESLSDSKYDAPLKLKKKSKKKQMESSSPAVVYE
SSVVTEDAGAPKLKKKKRKVKGGKASAGITDAEEILHENQNEETSADINQLAALSEDVDN
EEPQKLKRGKKMEVKKSGKAKKKDKHASRKDNNNLEGHVDVSAANADEIPLVDEDCSRGM
KKWILEYKQKRPGLKALQEAIDEFIVAHEEQQEKEKKEREARAAEDGWTVVVHHKGRKKT
TDTETGTAVGSVSLGAMQHKMAKMKPKEVDMNFYRFQKREAHLSELAMLQSKFQQDKKRI
QELRAQRKFKPY

Transcript Sequence

Transcript ID

Zm00001d017915_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:5:210055877:210059325:1 gene:Zm00001d017915 gene_biotype:protein_coding transcript_biotype:protein_coding description:ribosomal RNA-processing protein
Sequence

AATCATCGGAGTTCCCCGACGCCGATTGGCGACAGCCGAAGCCGACACCCCTCTCCGACG
CCGCCACAGCCTGGGGCAAGTCACGGACGGAGATCTCTGCGGAGCTACCCGTTTGTCTGC
TTTCCTTCGTATTGGTTACTAGTCTGTTGCTATGGGGAAATCCAAAGACAAGAAGGGTTC
GCGGGAAGCGAAGGAGGACAAGAAATTGGCGCTTGGGGTGAAGAGGAAGCAGCTGAAGAG
GAAGAAGGACAGAGTGTTGGAATGTGCCGTCGATAGCGAACCCGCTGCCGGGCATGGCGT
TAAAGAAGAAAAAGAATTGCCAAGGAGAAAGAAAATTCCATTGGTGAAGCAGAAGAAGAA
AAATAAGCATGCCAATGTTAAGAGTAATCATGATACGGCAGATGCTGTGGTGGAATCACT
GTCAGACAGTAAATATGATGCTCCACTGAAGCTAAAGAAGAAGAGCAAAAAGAAGCAAAT
GGAAAGTAGCAGTCCTGCAGTCGTATATGAAAGTTCAGTTGTTACTGAAGATGCTGGAGC
ACCTAAGCTGAAGAAAAAGAAAAGGAAGGTAAAGGGAGGGAAGGCCTCTGCTGGGATTAC
TGACGCAGAAGAAATTCTGCATGAAAATCAAAATGAAGAAACTAGTGCTGATATCAACCA
ACTTGCAGCACTGAGTGAAGATGTGGATAATGAAGAGCCTCAGAAATTAAAGCGGGGAAA
GAAAATGGAAGTTAAAAAATCTGGGAAGGCCAAGAAGAAAGACAAGCATGCATCGCGTAA
AGATAATAACAACTTGGAGGGACATGTTGATGTTAGTGCTGCAAACGCTGATGAGATTCC
ATTAGTTGATGAAGACTGCTCTAGAGGAATGAAAAAATGGATCTTGGAGTACAAACAGAA
GAGACCTGGCTTGAAAGCCTTGCAGGAAGCAATAGATGAATTTATTGTTGCTCATGAGGA
ACAACAAGAGAAGGAGAAGAAAGAGAGAGAGGCCCGCGCAGCAGAAGATGGATGGACAGT
TGTGGTTCATCACAAGGGGAGGAAAAAGACCACAGATACTGAAACTGGAACGGCTGTTGG
CTCTGTATCTCTTGGTGCAATGCAACATAAAATGGCTAAAATGAAACCCAAGGAAGTTGA
TATGAACTTCTACAGATTTCAGAAAAGAGAAGCCCACCTCAGTGAACTGGCAATGTTGCA
GAGCAAGTTCCAGCAGGATAAGAAAAGGATACAGGAACTTCGGGCCCAGAGGAAATTCAA
GCCTTACTAATTCTGCTCAAATCTTAAAGATGGCCAAAGGATGGTCACTCGCAACAAACA
ATTTTGATTTGCTGGATATTATCTTACCATGTATGGTTCTTGGCTGAAACAATATCAACT
GTAGACTGTCTTGCATTTGCGGGTGCCAATATATGTTATTTTTTAGTCAGA