Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d017894_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:5:209707498:209709330:-1 gene:Zm00001d017894 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein mitochondrial
Sequence	ATGATCCTGCGGCCTTCTCTTCTGGCCGTCGCCCGCCCTCTCAGCACCGTAGCCGTCGCG GCGGCCGTCCGCCGCGGGGACCTCGCCGGCGCGGAGGAAGCCTTCGCGTCGACGCAGCTC AAGACCACGACCACCTACAACTGCCTTCTCGCGGGATACGCGAAGGCGTCCGGTCTCATC CGCCTCGCGGACGCACGCCGCTTGTTCGACAGTATCCCGCACCCGGACACCGTCTCCTAC AACACGCTCCTGTCCTGCCACTTTGCCTGCGGCGATATTGATGGCGCGCGGAGAGTCTTC TCCACGATGCCCGTCAAGGATGTCACGTCGTGGAACACTATGGTCTCCGGGCTCTCCAAG AACGGGGCCAGCGAGGAGGCCGCAGCCATGTTTCGGATCATGCCGGTGAGGAATGCTGTT TCCTGGAATGCAATGGTTGCCGCGCTCGCGTGCTCTGGAGACATGGGTGCAGCAGAGGAC TTGTTTAGGAATGCGCCGGAGAAGACGGATGCCATTCTCTGGACTGCAATGGTGTCAGGG TACATGGACACCGGCAATGTCCAGAAGGCCATGGAATTCTTCGGGGCAATGCCTGTGAGG AACTTGGTTTCATGGAATGCTGTTGTTGCTGGTTATGTAAAAAACTCACGCGCAGATGAT GCTTTGAGGGTGTTCAAGACCATGGTTGAGGACTCTATTGTGCAGCCAAATGCGTCAACG TTAAGTAGCGTGCTTCTTGGATGCAGTAACCTGTCTGCACTTGGATTTGGGAGGCAGGTA CATCAGTGGTGCATGAAGTTGCCTCTTAGCAGGAATGTGACTGTGGGCACATCTCTTCTC AGCATGTACTGCAAATGCGGCGATTTGAATGATGCCTGCAAGGTGTTTGATGAGATGAGT ACAAAGGATATAGTTGCATGGAACGCCATGATTTCTGGCTACGCCCAACATGGGGGTGGA ATGCAAGCTATCAAGTTATTTGAAAAAATGAAGGATGAAGGAGTGGTGCCAGACTGGATT ACTCTGTTGGCAGTATTGACAGCTTGTATCCACACTGGATTGTGTGATTTTGGAATCCAA TGCTTTGAAACAATGCAGGAAGCATATAAGATTGAACCTCAGATTGATCATTACTCATGT ATGGTGGATCTTCTCTGCCGAGCTGGTCTGCTTGAAAGAGCTGTCAACATGATCCATTCA ATGCCCTTTGAGCCACATCCTTCTGCCTATGGCACCTTGCTGACTGCTTGTAGAGTTTAT AAGAATTTGGAGTTTGCTGAGTTTGCTGCTAGAAAGCTGATTGAACAGGATCCACAGAAT GCAGGTGCCTATGTACAGCTGGCAAATATTTATGCGGTGGCAAATAAGTGGGCTGATGTC TCTAGAGTAAGGAGATGGATGAAGGATAATGCGGTAGTGAAAACACCTGGGTATAGCTGG ATGGAAATAAAGGGTGTAAGGCATGAGTTCAGATCTAATGACAGGCTGCATCCTCAGCTT GGTTTGATTCATGACAAGTTGGACCGCTTGCAGATGCTGATGAAAGCAATGGGCTACGTT CCTGATCTTGATTTTGCACTGCATGATGTCGAGGACAGTCTGAAGTCACAAATGCTGATG AGGCACAGCGAAAAGCTTGCTATCGCTTTCGGTCTGATTAGCACTTCCCCTGGGATGACC TTGAGGATCTTCAAGAACCTCAGGATCTGTGGAGATTGTCATAATGCAGCCAAGCTTATA TCCAAAATCGAGGATCGGGAAATAATACTAAGGGATACCACACGGTTCCACCATTTTAGA GGTGGGCATTGCTCATGCGGGGATTACTGGTGA

Peptide Sequence

PEP ID	Zm00001d017894_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:5:209707498:209709330:-1 gene:Zm00001d017894 transcript:Zm00001d017894_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein mitochondrial
Sequence	MILRPSLLAVARPLSTVAVAAAVRRGDLAGAEEAFASTQLKTTTTYNCLLAGYAKASGLI RLADARRLFDSIPHPDTVSYNTLLSCHFACGDIDGARRVFSTMPVKDVTSWNTMVSGLSK NGASEEAAAMFRIMPVRNAVSWNAMVAALACSGDMGAAEDLFRNAPEKTDAILWTAMVSG YMDTGNVQKAMEFFGAMPVRNLVSWNAVVAGYVKNSRADDALRVFKTMVEDSIVQPNAST LSSVLLGCSNLSALGFGRQVHQWCMKLPLSRNVTVGTSLLSMYCKCGDLNDACKVFDEMS TKDIVAWNAMISGYAQHGGGMQAIKLFEKMKDEGVVPDWITLLAVLTACIHTGLCDFGIQ CFETMQEAYKIEPQIDHYSCMVDLLCRAGLLERAVNMIHSMPFEPHPSAYGTLLTACRVY KNLEFAEFAARKLIEQDPQNAGAYVQLANIYAVANKWADVSRVRRWMKDNAVVKTPGYSW MEIKGVRHEFRSNDRLHPQLGLIHDKLDRLQMLMKAMGYVPDLDFALHDVEDSLKSQMLM RHSEKLAIAFGLISTSPGMTLRIFKNLRICGDCHNAAKLISKIEDREIILRDTTRFHHFR GGHCSCGDYW

Transcript Sequence

Transcript ID	Zm00001d017894_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:209707498:209709330:-1 gene:Zm00001d017894 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein mitochondrial
Sequence	ATGATCCTGCGGCCTTCTCTTCTGGCCGTCGCCCGCCCTCTCAGCACCGTAGCCGTCGCG GCGGCCGTCCGCCGCGGGGACCTCGCCGGCGCGGAGGAAGCCTTCGCGTCGACGCAGCTC AAGACCACGACCACCTACAACTGCCTTCTCGCGGGATACGCGAAGGCGTCCGGTCTCATC CGCCTCGCGGACGCACGCCGCTTGTTCGACAGTATCCCGCACCCGGACACCGTCTCCTAC AACACGCTCCTGTCCTGCCACTTTGCCTGCGGCGATATTGATGGCGCGCGGAGAGTCTTC TCCACGATGCCCGTCAAGGATGTCACGTCGTGGAACACTATGGTCTCCGGGCTCTCCAAG AACGGGGCCAGCGAGGAGGCCGCAGCCATGTTTCGGATCATGCCGGTGAGGAATGCTGTT TCCTGGAATGCAATGGTTGCCGCGCTCGCGTGCTCTGGAGACATGGGTGCAGCAGAGGAC TTGTTTAGGAATGCGCCGGAGAAGACGGATGCCATTCTCTGGACTGCAATGGTGTCAGGG TACATGGACACCGGCAATGTCCAGAAGGCCATGGAATTCTTCGGGGCAATGCCTGTGAGG AACTTGGTTTCATGGAATGCTGTTGTTGCTGGTTATGTAAAAAACTCACGCGCAGATGAT GCTTTGAGGGTGTTCAAGACCATGGTTGAGGACTCTATTGTGCAGCCAAATGCGTCAACG TTAAGTAGCGTGCTTCTTGGATGCAGTAACCTGTCTGCACTTGGATTTGGGAGGCAGGTA CATCAGTGGTGCATGAAGTTGCCTCTTAGCAGGAATGTGACTGTGGGCACATCTCTTCTC AGCATGTACTGCAAATGCGGCGATTTGAATGATGCCTGCAAGGTGTTTGATGAGATGAGT ACAAAGGATATAGTTGCATGGAACGCCATGATTTCTGGCTACGCCCAACATGGGGGTGGA ATGCAAGCTATCAAGTTATTTGAAAAAATGAAGGATGAAGGAGTGGTGCCAGACTGGATT ACTCTGTTGGCAGTATTGACAGCTTGTATCCACACTGGATTGTGTGATTTTGGAATCCAA TGCTTTGAAACAATGCAGGAAGCATATAAGATTGAACCTCAGATTGATCATTACTCATGT ATGGTGGATCTTCTCTGCCGAGCTGGTCTGCTTGAAAGAGCTGTCAACATGATCCATTCA ATGCCCTTTGAGCCACATCCTTCTGCCTATGGCACCTTGCTGACTGCTTGTAGAGTTTAT AAGAATTTGGAGTTTGCTGAGTTTGCTGCTAGAAAGCTGATTGAACAGGATCCACAGAAT GCAGGTGCCTATGTACAGCTGGCAAATATTTATGCGGTGGCAAATAAGTGGGCTGATGTC TCTAGAGTAAGGAGATGGATGAAGGATAATGCGGTAGTGAAAACACCTGGGTATAGCTGG ATGGAAATAAAGGGTGTAAGGCATGAGTTCAGATCTAATGACAGGCTGCATCCTCAGCTT GGTTTGATTCATGACAAGTTGGACCGCTTGCAGATGCTGATGAAAGCAATGGGCTACGTT CCTGATCTTGATTTTGCACTGCATGATGTCGAGGACAGTCTGAAGTCACAAATGCTGATG AGGCACAGCGAAAAGCTTGCTATCGCTTTCGGTCTGATTAGCACTTCCCCTGGGATGACC TTGAGGATCTTCAAGAACCTCAGGATCTGTGGAGATTGTCATAATGCAGCCAAGCTTATA TCCAAAATCGAGGATCGGGAAATAATACTAAGGGATACCACACGGTTCCACCATTTTAGA GGTGGGCATTGCTCATGCGGGGATTACTGGTGA