Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d017883_T032
CDS Infomation

cds chromosome:B73_RefGen_v4:5:209534799:209545234:-1 gene:Zm00001d017883 gene_biotype:protein_coding transcript_biotype:protein_coding description:Enhancer of mRNA-decapping protein 4
Sequence

ATGGCGTCTCCAAGCGGAAACCCTAACCCTAATCCCAATACACCATTCGAGATCGGAAAG
CTCTTCAGGCCACCGAATCCTATGACCACCGCGACCCCCAACCCCATCTTCCCCGGCGTC
GCCGGAGGCCCGACGGGCTCGCCGCCGCCGTCCGGTCCCTACTCCTACCCTCCGGTGACC
CCGCCCTTCCACCGCGGACCCTACATCCACTACCAGCAGGATCCCCACGCCATGGCCCGT
CCCGTTGTCTCCTTCCCCATGCCAAACCCAAACCTCAACCCCAATCCCAACCCGAACGCT
AACCCCAACGCCGCCTCCCCGGGCCCCAACCCTGGCGCGCGCCTCATGCAGCTGCTCGGG
AACTCCGGGCCGACCCAGCTCGAAACCGCCGTCTCCATGCCCCCGCCCACGTCGGAGTTC
GCGCAACTGCAGCAGCTACCAGCGATGCCATCCGCGCCGCCGGCCAGGATGCTGAGCAGC
ACCAGCAGCAAGGTGCCCAGGGGACGGTTACTTGGCACCGGGGAACGTGCGGTGCACGAC
GTTGACTCCAGGCTGCCTGGGGAAGCGCAGCCACCGCAGCTGGAGGTAACACCGATTACC
AAGTACACATCGGATCCGGGGCTCGTGCTGGGCAGACAGATCGCTGTGAACCGGACGTAC
ATCGTGTATGGGCTCAAGCTCGGTAACATCCGTGTGCTGAACATCAACACCGCACTCCGC
GCGCTCCTCCGTGGTCACACACAGAGGGTGACAGACATGGCTTTCTTTGCTGAGGATGTC
CATCGTTTGGCAAGTGCGAGCATAGATGGACGGATATATGTGTGGAGAATCGATGAAGGA
CCTGATGAGGAAAATAAACCACAAATTACTGGGAAGATTGAAATCGCCATCCAGATTGTA
GGCGAGGCTGAAGCTTACCATCCAAGGATATGTTGGCACTCGCATAAGCAAGAGATTCTA
TTTGTTGGAATTGGGAACTGTGTCTTAAGAATAGATACAACTAAAGTGGGTAGAGGAAAA
GACTTCACTGTTGAAGACCCTGTTAAATGTCATCTTGAAAAGCTTGTTGATGGTGTTCGC
TTAGTTGGTAAGCACGATGGTGATGTGACTGATTTGTCCATATCTCAATGGATGAGCACC
CGCCTGGCCTCTGGATCCAAGGATGGCTCGGTTAAGATCTGGGATGATCGTAAACAAGTG
CCATTATCCATTTTTAAGCCCCATGATGGTCAAGCTGTTTATTCAGTTGCTTTTCTTACA
GCACCTGAACGACCAAATCATATAAATCTAATTACAGCGGGTCTTCTGAATCGAGAAGTT
AAAATTTGGGCTTCTACTAATGAGGATGGCTGGTTGTTGCCAAGTGATTCTGAGACTTGG
AAGTGTACTCAGACGTTGGAACTTGTTAGTTCTCTGGAACCTAGAGTCGAAGAGGCATTT
TTCAACCAGGTTGCGGTGCTGCCCCAAGCGAGCCTGATTTTGCTTGCAAATGCTAAAAAG
AACGCTATTTATGCCGTGCATGTTGAGTATGGCCCAGATCCTGCTTCTACTCGCTTAGAC
TACATAGCAGATTTCACAGTTGCAATGCCTATATTAAGCCTTACAGGAACACATGATAGC
CAACCTGATAGTGAACAAGTTGTTCAAGTCTATTGTGTTCAAACTATGGCCATTCAGCAA
TATGGTCTAGAGCTACCACTCTGTTTGCCTCCTACAGCTGATAGTACTGGGTTTGGAAGA
GATCCTGCTATTTCTCGTGTTTACGAGGCACCTCTGGAAATGGCAGGAACAGAGTCATCT
ACAGGAACTAGTTTCACAGATTCTTACTCTGTCAGTTCTTTGAGTAAACCATCAACTGTT
GACCAGTCTGCAGGTAATGCAGTTGCATTTTCTTATTTAATTCTTTCAGATTTATCTGCA
GAGCTTGATCTGAAACCATCAGCTCCACCGCTTGCATACTCAGAAGGTGATGGTTCCGTG
CCTCTTCCATCTGCACCTCCTGCACCGAAGATGGAGGCTCCTGGATCAGGACCAGCACCT
GGAGGTCGTGGTATAGATCAATCAGCTTTTGACTATACAACAAACAGAAATGTGGAGCGT
GATGTTTTGAAAAGACAAGATACACCCATGCCCATTAGAAAGGATATCTTAGGTAAAGAT
GAGCCAAGAGATGGTCACAGTGATGTTCCAATGCTTCCCAATCCCCGTTTGATGTTTCAG
GTTGGAGGGAATGCTACGCATTTGGTTACTCCATCTGAAATTATATCGGGCACTCTCTCG
TCTTCTGAAAACAATGATGCTTCCAAATCTGATGGAGGAAAAAGTCAAGATGTTTCCAGC
AGAAGCTCTCAGGTTCCAGAAGTGGAACCAAAGCATATTGATGAGAGTAAACAAGATCAA
AATTTGGGACTCGAAGCTGTCAAAGAAACTCAGATTGTCTGTGAGAATATGGAGAAAACT
CGGAGTTCCTTGGACCAAACTGTTGAAATGATCAGTGAGCGCTCAGTTACAACTGATAAG
TACAGCGTGGAAGAATCACAGTCATCATCTGATCGACCGACATCAGACCAGACTGGTATC
AGTGAAAATGTTCTGAAGAAGTTTGTGGAAATGCCTGAGAAAATTGATTATTCCTCTGCT
TCTAGGGAGCAATCATCTTCATTTACGAAAGAGGAGAAAGTTTTGCATCCTCAAACATCT
GGTCAACCGTCACCTCCTGTGAGTGCTTTCAATTCAACTGAGTCACATGAGCCTTTGAGC
TCCACATACCTACCAATCACAGTCAGCTCCTACCCAGAAGTTGGTGCCACACAAGGGATG
CTGCAACAGCTCATGGGGAGGCAGGAGGACATGGAAAAGCAGCTGAGTACTGTGGTTCCT
GCATCCATCGCAAAGGAGGGCAAAAGACTTGAGACATCATTAGGGCGCACTGTAGAGAAA
TCGATCAAAGCTAATATTGATGCATTTTGGGCTCGTCTCCAGGAGGAAAACACTAAGCGT
GAAAAGGCTGATAGAGATCGAATGCAGCAATTTGTTACTCTCATTACAAGCTCAATAAAT
AAGGACTTACCTTCTAATCTGGAGAAGTCACTTAAGAAAGAAATTTCTTCACTTGGGCCT
GTTGTTGCTCGTGCAATTACGCCTATTATTGAGAAGTGTCTAACCTCTGCTGTTTCTGAT
TCAGTTCAGAAAGGGTTGGGTGACAAGTTGTTCAATCAGCTGGAAAAGTCTATTACTGGA
AAACTTGAAGCTACACTTGCCAGGCAAATCCAAATCCAGTTCCATACATCTGGAAAACAG
GCTCTTCAGGATGCTTTACGTACTAGCTTTGAATCATTGCTTGTTCCAGCGTTTGAGCAA
GCATGCAAGACAATGTTTGAGCAAATAGATGGTGCATTTCAAAAGGGAATGTCTGAGCAC
TCCACCGCTATTCAGCATCAAGTCGAGTCTTCACATAGTCCGTTAGCGCTAACTCTAAAA
GAAATCATCAATTCTGCATCATCCATCACCCAGAGTTTTTCATCGGAGTTACTTGATGGC
AATCGCAAGCTACTGGCACTTGTTACTTCTGGGAATGCCATGGCACATAATACCAGTGCT
TTGCAGCCCATTAATGGTCCTATGGGTGGATCCCAGGAGGTTGAGGCTCCGTTAGATCCT
ATGAAAGAGCTGGGCAGACTGATATCTGAACGCAAGTTTGACGAAGCATTTACAATGGCT
CTTCAAAGGAGTGATGTTTCCATAGTATCGTGGCTATGCTCCCAGGTTGATTTGCGGGCA
TTATGTGCAATGGTCCCAGTACCTCTTAACCAGGGGGTCCTCCTGGCCTTATTGCAGCAG
CTAGCAATTGACATTCACAATGAGACATCACGAAAGGTTCAATGGATGACAGATGTTGCC
ATGGCAATCAACCCAGCAGACCAGATGATCGCGGTTCATGTGCGGCCTATCTTTGAGCAA
GTCTACAACCAACTGGCCCACCAGCGGACACTCCCTACCATGACCGCAGCAGATGGCACC
AGCATCCGTGTGATCATGCATGTAATTAACTCAGTTCTGCTTAGCTACAAGTGA

Peptide Sequence

PEP ID

Zm00001d017883_P032
PEP Infomation

pep chromosome:B73_RefGen_v4:5:209534799:209545234:-1 gene:Zm00001d017883 transcript:Zm00001d017883_T032 gene_biotype:protein_coding transcript_biotype:protein_coding description:Enhancer of mRNA-decapping protein 4
Sequence

MASPSGNPNPNPNTPFEIGKLFRPPNPMTTATPNPIFPGVAGGPTGSPPPSGPYSYPPVT
PPFHRGPYIHYQQDPHAMARPVVSFPMPNPNLNPNPNPNANPNAASPGPNPGARLMQLLG
NSGPTQLETAVSMPPPTSEFAQLQQLPAMPSAPPARMLSSTSSKVPRGRLLGTGERAVHD
VDSRLPGEAQPPQLEVTPITKYTSDPGLVLGRQIAVNRTYIVYGLKLGNIRVLNINTALR
ALLRGHTQRVTDMAFFAEDVHRLASASIDGRIYVWRIDEGPDEENKPQITGKIEIAIQIV
GEAEAYHPRICWHSHKQEILFVGIGNCVLRIDTTKVGRGKDFTVEDPVKCHLEKLVDGVR
LVGKHDGDVTDLSISQWMSTRLASGSKDGSVKIWDDRKQVPLSIFKPHDGQAVYSVAFLT
APERPNHINLITAGLLNREVKIWASTNEDGWLLPSDSETWKCTQTLELVSSLEPRVEEAF
FNQVAVLPQASLILLANAKKNAIYAVHVEYGPDPASTRLDYIADFTVAMPILSLTGTHDS
QPDSEQVVQVYCVQTMAIQQYGLELPLCLPPTADSTGFGRDPAISRVYEAPLEMAGTESS
TGTSFTDSYSVSSLSKPSTVDQSAGNAVAFSYLILSDLSAELDLKPSAPPLAYSEGDGSV
PLPSAPPAPKMEAPGSGPAPGGRGIDQSAFDYTTNRNVERDVLKRQDTPMPIRKDILGKD
EPRDGHSDVPMLPNPRLMFQVGGNATHLVTPSEIISGTLSSSENNDASKSDGGKSQDVSS
RSSQVPEVEPKHIDESKQDQNLGLEAVKETQIVCENMEKTRSSLDQTVEMISERSVTTDK
YSVEESQSSSDRPTSDQTGISENVLKKFVEMPEKIDYSSASREQSSSFTKEEKVLHPQTS
GQPSPPVSAFNSTESHEPLSSTYLPITVSSYPEVGATQGMLQQLMGRQEDMEKQLSTVVP
ASIAKEGKRLETSLGRTVEKSIKANIDAFWARLQEENTKREKADRDRMQQFVTLITSSIN
KDLPSNLEKSLKKEISSLGPVVARAITPIIEKCLTSAVSDSVQKGLGDKLFNQLEKSITG
KLEATLARQIQIQFHTSGKQALQDALRTSFESLLVPAFEQACKTMFEQIDGAFQKGMSEH
STAIQHQVESSHSPLALTLKEIINSASSITQSFSSELLDGNRKLLALVTSGNAMAHNTSA
LQPINGPMGGSQEVEAPLDPMKELGRLISERKFDEAFTMALQRSDVSIVSWLCSQVDLRA
LCAMVPVPLNQGVLLALLQQLAIDIHNETSRKVQWMTDVAMAINPADQMIAVHVRPIFEQ
VYNQLAHQRTLPTMTAADGTSIRVIMHVINSVLLSYK

Transcript Sequence

Transcript ID

Zm00001d017883_T032
Transcript Infomation

cdna chromosome:B73_RefGen_v4:5:209534799:209545234:-1 gene:Zm00001d017883 gene_biotype:protein_coding transcript_biotype:protein_coding description:Enhancer of mRNA-decapping protein 4
Sequence

CCCTGTTCCCCAGTCCAGATCTACTCCACTGCCACCTCCTCTCCCCCTGCCTCTCATGGC
GTCTCCAAGCGGAAACCCTAACCCTAATCCCAATACACCATTCGAGATCGGAAAGCTCTT
CAGGCCACCGAATCCTATGACCACCGCGACCCCCAACCCCATCTTCCCCGGCGTCGCCGG
AGGCCCGACGGGCTCGCCGCCGCCGTCCGGTCCCTACTCCTACCCTCCGGTGACCCCGCC
CTTCCACCGCGGACCCTACATCCACTACCAGCAGGATCCCCACGCCATGGCCCGTCCCGT
TGTCTCCTTCCCCATGCCAAACCCAAACCTCAACCCCAATCCCAACCCGAACGCTAACCC
CAACGCCGCCTCCCCGGGCCCCAACCCTGGCGCGCGCCTCATGCAGCTGCTCGGGAACTC
CGGGCCGACCCAGCTCGAAACCGCCGTCTCCATGCCCCCGCCCACGTCGGAGTTCGCGCA
ACTGCAGCAGCTACCAGCGATGCCATCCGCGCCGCCGGCCAGGATGCTGAGCAGCACCAG
CAGCAAGGTGCCCAGGGGACGGTTACTTGGCACCGGGGAACGTGCGGTGCACGACGTTGA
CTCCAGGCTGCCTGGGGAAGCGCAGCCACCGCAGCTGGAGGTAACACCGATTACCAAGTA
CACATCGGATCCGGGGCTCGTGCTGGGCAGACAGATCGCTGTGAACCGGACGTACATCGT
GTATGGGCTCAAGCTCGGTAACATCCGTGTGCTGAACATCAACACCGCACTCCGCGCGCT
CCTCCGTGGTCACACACAGAGGGTGACAGACATGGCTTTCTTTGCTGAGGATGTCCATCG
TTTGGCAAGTGCGAGCATAGATGGACGGATATATGTGTGGAGAATCGATGAAGGACCTGA
TGAGGAAAATAAACCACAAATTACTGGGAAGATTGAAATCGCCATCCAGATTGTAGGCGA
GGCTGAAGCTTACCATCCAAGGATATGTTGGCACTCGCATAAGCAAGAGATTCTATTTGT
TGGAATTGGGAACTGTGTCTTAAGAATAGATACAACTAAAGTGGGTAGAGGAAAAGACTT
CACTGTTGAAGACCCTGTTAAATGTCATCTTGAAAAGCTTGTTGATGGTGTTCGCTTAGT
TGGTAAGCACGATGGTGATGTGACTGATTTGTCCATATCTCAATGGATGAGCACCCGCCT
GGCCTCTGGATCCAAGGATGGCTCGGTTAAGATCTGGGATGATCGTAAACAAGTGCCATT
ATCCATTTTTAAGCCCCATGATGGTCAAGCTGTTTATTCAGTTGCTTTTCTTACAGCACC
TGAACGACCAAATCATATAAATCTAATTACAGCGGGTCTTCTGAATCGAGAAGTTAAAAT
TTGGGCTTCTACTAATGAGGATGGCTGGTTGTTGCCAAGTGATTCTGAGACTTGGAAGTG
TACTCAGACGTTGGAACTTGTTAGTTCTCTGGAACCTAGAGTCGAAGAGGCATTTTTCAA
CCAGGTTGCGGTGCTGCCCCAAGCGAGCCTGATTTTGCTTGCAAATGCTAAAAAGAACGC
TATTTATGCCGTGCATGTTGAGTATGGCCCAGATCCTGCTTCTACTCGCTTAGACTACAT
AGCAGATTTCACAGTTGCAATGCCTATATTAAGCCTTACAGGAACACATGATAGCCAACC
TGATAGTGAACAAGTTGTTCAAGTCTATTGTGTTCAAACTATGGCCATTCAGCAATATGG
TCTAGAGCTACCACTCTGTTTGCCTCCTACAGCTGATAGTACTGGGTTTGGAAGAGATCC
TGCTATTTCTCGTGTTTACGAGGCACCTCTGGAAATGGCAGGAACAGAGTCATCTACAGG
AACTAGTTTCACAGATTCTTACTCTGTCAGTTCTTTGAGTAAACCATCAACTGTTGACCA
GTCTGCAGGTAATGCAGTTGCATTTTCTTATTTAATTCTTTCAGATTTATCTGCAGAGCT
TGATCTGAAACCATCAGCTCCACCGCTTGCATACTCAGAAGGTGATGGTTCCGTGCCTCT
TCCATCTGCACCTCCTGCACCGAAGATGGAGGCTCCTGGATCAGGACCAGCACCTGGAGG
TCGTGGTATAGATCAATCAGCTTTTGACTATACAACAAACAGAAATGTGGAGCGTGATGT
TTTGAAAAGACAAGATACACCCATGCCCATTAGAAAGGATATCTTAGGTAAAGATGAGCC
AAGAGATGGTCACAGTGATGTTCCAATGCTTCCCAATCCCCGTTTGATGTTTCAGGTTGG
AGGGAATGCTACGCATTTGGTTACTCCATCTGAAATTATATCGGGCACTCTCTCGTCTTC
TGAAAACAATGATGCTTCCAAATCTGATGGAGGAAAAAGTCAAGATGTTTCCAGCAGAAG
CTCTCAGGTTCCAGAAGTGGAACCAAAGCATATTGATGAGAGTAAACAAGATCAAAATTT
GGGACTCGAAGCTGTCAAAGAAACTCAGATTGTCTGTGAGAATATGGAGAAAACTCGGAG
TTCCTTGGACCAAACTGTTGAAATGATCAGTGAGCGCTCAGTTACAACTGATAAGTACAG
CGTGGAAGAATCACAGTCATCATCTGATCGACCGACATCAGACCAGACTGGTATCAGTGA
AAATGTTCTGAAGAAGTTTGTGGAAATGCCTGAGAAAATTGATTATTCCTCTGCTTCTAG
GGAGCAATCATCTTCATTTACGAAAGAGGAGAAAGTTTTGCATCCTCAAACATCTGGTCA
ACCGTCACCTCCTGTGAGTGCTTTCAATTCAACTGAGTCACATGAGCCTTTGAGCTCCAC
ATACCTACCAATCACAGTCAGCTCCTACCCAGAAGTTGGTGCCACACAAGGGATGCTGCA
ACAGCTCATGGGGAGGCAGGAGGACATGGAAAAGCAGCTGAGTACTGTGGTTCCTGCATC
CATCGCAAAGGAGGGCAAAAGACTTGAGACATCATTAGGGCGCACTGTAGAGAAATCGAT
CAAAGCTAATATTGATGCATTTTGGGCTCGTCTCCAGGAGGAAAACACTAAGCGTGAAAA
GGCTGATAGAGATCGAATGCAGCAATTTGTTACTCTCATTACAAGCTCAATAAATAAGGA
CTTACCTTCTAATCTGGAGAAGTCACTTAAGAAAGAAATTTCTTCACTTGGGCCTGTTGT
TGCTCGTGCAATTACGCCTATTATTGAGAAGTGTCTAACCTCTGCTGTTTCTGATTCAGT
TCAGAAAGGGTTGGGTGACAAGTTGTTCAATCAGCTGGAAAAGTCTATTACTGGAAAACT
TGAAGCTACACTTGCCAGGCAAATCCAAATCCAGTTCCATACATCTGGAAAACAGGCTCT
TCAGGATGCTTTACGTACTAGCTTTGAATCATTGCTTGTTCCAGCGTTTGAGCAAGCATG
CAAGACAATGTTTGAGCAAATAGATGGTGCATTTCAAAAGGGAATGTCTGAGCACTCCAC
CGCTATTCAGCATCAAGTCGAGTCTTCACATAGTCCGTTAGCGCTAACTCTAAAAGAAAT
CATCAATTCTGCATCATCCATCACCCAGAGTTTTTCATCGGAGTTACTTGATGGCAATCG
CAAGCTACTGGCACTTGTTACTTCTGGGAATGCCATGGCACATAATACCAGTGCTTTGCA
GCCCATTAATGGTCCTATGGGTGGATCCCAGGAGGTTGAGGCTCCGTTAGATCCTATGAA
AGAGCTGGGCAGACTGATATCTGAACGCAAGTTTGACGAAGCATTTACAATGGCTCTTCA
AAGGAGTGATGTTTCCATAGTATCGTGGCTATGCTCCCAGGTTGATTTGCGGGCATTATG
TGCAATGGTCCCAGTACCTCTTAACCAGGGGGTCCTCCTGGCCTTATTGCAGCAGCTAGC
AATTGACATTCACAATGAGACATCACGAAAGGTTCAATGGATGACAGATGTTGCCATGGC
AATCAACCCAGCAGACCAGATGATCGCGGTTCATGTGCGGCCTATCTTTGAGCAAGTCTA
CAACCAACTGGCCCACCAGCGGACACTCCCTACCATGACCGCAGCAGATGGCACCAGCAT
CCGTGTGATCATGCATGTAATTAACTCAGTTCTGCTTAGCTACAAGTGATTGTAGCTACG
CAACTGTGGGAAGTATGGCCTATTCTATCTTGTATAGAGAAATTTTGAATGGCCACAACC
CACAACCCAGGAGA