Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d017848_T036
CDS Infomation	cds chromosome:B73_RefGen_v4:5:208666424:208684238:-1 gene:Zm00001d017848 gene_biotype:protein_coding transcript_biotype:protein_coding description:Clustered mitochondria protein
Sequence	ATGGCGGGGAAATCCAAGGGTGGGAAGAACAAAGGGAAGGCGCAAGTCGTGGGTCACTCC GCCTCAGCTGAGCCAGAGGTGCTGGCGACTGATGGAGCCGAATTGGTTAATCCAGATAAC GGGGAAGTAAGCGAACCCGGGGAAGTAAGCGACCCCCCTGCCACGGAGGATGGCGTGGCA GATGTAGAGAAAGGAGACGGGGATGCTCCGGAGGTTGTGCAGTCTGCAAAAAAGCCAGCT GAAGGAGAGCTTCATCTGTACCCTGTTCCTGTCAGGACACAATCTGGTGAAAAGCTCGAG CTGCAGCTAAGCCCAGGAGATTCTGTTATTGATGTTAAACAATTCCTCTTGGATGCTCCT GAAACATGCTTCTACACATGCTATGATTTGATATTGCATACTGAAGATGGGTCAGCTCAT CAGTTAGAAGACTACAATGAAATATCTGAAATAGCAGATATAACTTCTGGTGGATGTTCA CTGGAGATGGTTGCTGCAATATATGATGAGAGGTCTATTAGGTCACATCTCCGACGTGTG AGGGAGTTACTATCTCTGTCTACTCTTCATGTTTCCCTATCGACATCCTTAACTCTGCAG CAGGAGTCTGCCCAGGGAAAATCTGCAGATTCTGGAAAAAGCCCTATTCAGGAGCTTGAT GGTTTAAATTTTATGGAGGATAGTGCTGGTGCTCTCACTAATTTATTGGCATCTACACCA GCAGAGATAAAATGTGTTGAAAGCATGGTTTTTTCTTCTTTCAATCCTCCGCCGACCTAT CGGAGGTTACATGGAGATCTCATCTATATTGATGTTGCTACATTGGAAGGAAACAAATAC TGCATTACTGGAAGCTCCAAATCTTTTTATGTTAACAGTAGCAACAAAAATATATTTGAC TCGAAACCTACAAAACAAGGACTGGAGGCCAGCACTCTCGTAGGCCTACTACAGAAGATC AGTGCCAAATTTAAGAAAGGTTTTCGTGAAGTTTTGGATCGCAGGGCATCGGCTCATCCA TTTGAGAATGTTCAGTCTTTGCTTCCAGTGACTTCTTGGCTAGGAGCGTATCCTGTGCCC GAACATAGAAGGGATGCAGCCAGGGCTGAAGATTCTGTTGTGTTGTCATATGGCACTGAG TTAATTGGCATGCAAAGAGACTGGAATGAAGAATTGCAGTCCTGCCGGGAGTTTCCTCAT GGCAATCCTCAAGAAAGGATACTGCGGGGCAGAGCGCTCTACAAAGTAACATGTGATTTT GTTGATGCTGCAGTAAAAGGTGCAGTTGGTGTCATCAATAGATGCATACCCCCAATAAAT CCAACTGACCCAGAATGTTTTCATATGTATGTTCACAACAATATTTTCTTTAGTTTTGCT GTCGACTCCGACTATGAAGACATTTCAAAGGACCACAAGCCAGATTGCCAAAATGGGTCC AGCAGAAGCACCAAGGTTTCCTCCCCAGATGTGATAACTAAGCCAGATGCAAACCATGGC AAATCTGCTGAGGTAGTTGATTCAAAATCTGAAGAGGCACAACTCGCAGATAGTGAGCAG GCGACATATGCTTCTGCAAACAATGACTTAAAAGGAACTAAGGCTTATCAAGAAGCTGAT GTTTCTGGCCTTCACAATCTTGCGATGGCAATAGTTGATTACAGAGGTCACAGGGTTGTA GCTCAGAGTATAATACCTGGTATTCTTCAAGGAGACAAGTCCGATTCCCTTCTGTATGGT TCTGTTGATAATGGCAAGAAGATATCTTGGAACGAAACGTTCCATTCTAAGGTTGTTGAG GCTGCAAAGCAGCTCCATTTGAAGGAACATGTGGTATTGGATGGTTCTGGCAATCCTATA AAATTAGCTGCTACAGTCGAATGCAAGGGTATTGTTGGGAGTGATGACAGACATTACATT TTGGATCTGATGAGAGTGACTCCTCGAGATTCTAACTACATTGGACAAGAGCACCGCTTC TGTGTGTTGAGACCTGAACTTATAGCATCATTTGTTGAGGTTGAATCCATAAAACAATCG TTGAAGCAAAAGGTTCCAGATGCTCCAGTTGCAAGTACTTCTGATGCTAAGGCTACCTCT GTTGAAGGAGATGACAAGTCTGAAGAAAGCTCTGTTCATACACACGAGGAAAATGACAAC TCAAGCTCCGAGATTCTTTTCAATCCGAATGTGTTTACAGAGTACAAGCTTGCTGGCAGT GCAGAGGAAATCGCTGCTGACGAAGAGTTGGTAAAAAGGGCTGGTACATATCTTGTAGAT ATAGTGATCCCAAAGTTTGTTCAGGATCTTTGTTCCCTTGATATCTCCCCTATGGATGGA CAGACTTTAACAGATGCATTGCATCTCCATGGGATAAATATTAGGTATCTGGGCAAGATT GCAGGCATGGTCAAACATTTACCACACCTATGGGACTTGTTTTCTACTGAGATAATAGTT AGATCTGCAAAGCATGTTATCAAGGATATACTGAGACAAAGTTTGGACCATGATATTGCG CCAGCTATTGCTCATTTCTTAAACTGTTTCGTTGGGAAAGTTTTAGGTGCTTCCACAAAG AGTAGTCTTAGCAACGCACAGTCAAAAACTCTGAAGGGTCACGAAAATAGCCAAACTCAA AAGTCTACTAAAGGCCCTAAACTGAGCCATGCTGCCGTTTCAAGAAAAAGCTTATCAACT TATTCTCATCTAACCTCTGATGGAATTTGGTTTAGCATTAAGGAATTTGCAAAATCAAAA TATCAGTTTGAAGTGCCAGATGAAGCTAGGCTTTCAGCCAAAAGGGTAGCTGTTCTCCGC AACCTATGCCGAAAGGTAGGAATAACAATTGCTGCACGAAAATATGATATGGATGCTTCA AGTCCATTTGAGGCCTCGGATATGTTAAATCTCCAACCAGTTGTCAAGCATTCTGTTCCA ACCTGTACAGATGCAAAGAATCTTATGGAAGCAGGGAAAGTCAGGATGGCTGAGGGAACA TTGAATGAGGCATATGCATTGTTTTCTGAAGCCTTTTCACTGCTTCAACAGATTACTGGT CCCATGCACAAGGATGCTGCAAATTGTTGCCGGTACCTTGCTATGGTTTTGTACCATGCT GGTGATACAGCCGGTGCAATTGTGCAGCAGCATAGGGAACTCATCATAAACGAGAGATGT CTTGGTCTTGATCATCCGGACACAGCCCACAGTTATGGTAACATGGCCTTGTTCTATCAT GGGCTCAATCAAACTGAATTGGCACTGCGGCACATGTCCCGTACACTGCTGCTGCTAAGT TTGGCGTCAGGACCTGATCATCCAGATGTTGCAGCAACTCTCATAAATGTTGCAATGATG TACCAGGATGCCAGTAATATGAATACTGCTCTTAGGTATCTTCAAGAAGCCCTTATGAAG AATGAACGACTTCTTGGCCCTGACCATGTTCAAACAGCCGTATGCTATCATGCTCTTGCC ATTGCATTCAGTTGTATGAGCTTATATAAGCTTTCAATTCAGCATGAAAAGAAGACCTAT GATATACTGGTAAAACAATTA

Peptide Sequence

PEP ID	Zm00001d017848_P036
PEP Infomation	pep chromosome:B73_RefGen_v4:5:208666424:208684238:-1 gene:Zm00001d017848 transcript:Zm00001d017848_T036 gene_biotype:protein_coding transcript_biotype:protein_coding description:Clustered mitochondria protein
Sequence	MAGKSKGGKNKGKAQVVGHSASAEPEVLATDGAELVNPDNGEVSEPGEVSDPPATEDGVA DVEKGDGDAPEVVQSAKKPAEGELHLYPVPVRTQSGEKLELQLSPGDSVIDVKQFLLDAP ETCFYTCYDLILHTEDGSAHQLEDYNEISEIADITSGGCSLEMVAAIYDERSIRSHLRRV RELLSLSTLHVSLSTSLTLQQESAQGKSADSGKSPIQELDGLNFMEDSAGALTNLLASTP AEIKCVESMVFSSFNPPPTYRRLHGDLIYIDVATLEGNKYCITGSSKSFYVNSSNKNIFD SKPTKQGLEASTLVGLLQKISAKFKKGFREVLDRRASAHPFENVQSLLPVTSWLGAYPVP EHRRDAARAEDSVVLSYGTELIGMQRDWNEELQSCREFPHGNPQERILRGRALYKVTCDF VDAAVKGAVGVINRCIPPINPTDPECFHMYVHNNIFFSFAVDSDYEDISKDHKPDCQNGS SRSTKVSSPDVITKPDANHGKSAEVVDSKSEEAQLADSEQATYASANNDLKGTKAYQEAD VSGLHNLAMAIVDYRGHRVVAQSIIPGILQGDKSDSLLYGSVDNGKKISWNETFHSKVVE AAKQLHLKEHVVLDGSGNPIKLAATVECKGIVGSDDRHYILDLMRVTPRDSNYIGQEHRF CVLRPELIASFVEVESIKQSLKQKVPDAPVASTSDAKATSVEGDDKSEESSVHTHEENDN SSSEILFNPNVFTEYKLAGSAEEIAADEELVKRAGTYLVDIVIPKFVQDLCSLDISPMDG QTLTDALHLHGINIRYLGKIAGMVKHLPHLWDLFSTEIIVRSAKHVIKDILRQSLDHDIA PAIAHFLNCFVGKVLGASTKSSLSNAQSKTLKGHENSQTQKSTKGPKLSHAAVSRKSLST YSHLTSDGIWFSIKEFAKSKYQFEVPDEARLSAKRVAVLRNLCRKVGITIAARKYDMDAS SPFEASDMLNLQPVVKHSVPTCTDAKNLMEAGKVRMAEGTLNEAYALFSEAFSLLQQITG PMHKDAANCCRYLAMVLYHAGDTAGAIVQQHRELIINERCLGLDHPDTAHSYGNMALFYH GLNQTELALRHMSRTLLLLSLASGPDHPDVAATLINVAMMYQDASNMNTALRYLQEALMK NERLLGPDHVQTAVCYHALAIAFSCMSLYKLSIQHEKKTYDILVKQL

Transcript Sequence

Transcript ID	Zm00001d017848_T036
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:208666424:208684238:-1 gene:Zm00001d017848 gene_biotype:protein_coding transcript_biotype:protein_coding description:Clustered mitochondria protein
Sequence	GCAGCGACGGAAAAAAGAGAGTGAAAAGAACGAAACCACTCACCCAGACTCGCAGAGGCC ACACGAGAGATTAGGAGGGTTTGCCCATCCGTATAAAAAGGAGCGGCCGGCGAGGGCTGC AGTCTGCAGATCCCGTCTCCGCTTTACCAAAACAGCTCCTCGCCCAATCATTCTCTCTGC CTCGTCCTCGCGCCGCCTCTCATCTTCCGGGAGTCAGCGGCGGCGGAATATGGCGGGGAA ATCCAAGGGTGGGAAGAACAAAGGGAAGGCGCAAGTCGTGGGTCACTCCGCCTCAGCTGA GCCAGAGGTGCTGGCGACTGATGGAGCCGAATTGGTTAATCCAGATAACGGGGAAGTAAG CGAACCCGGGGAAGTAAGCGACCCCCCTGCCACGGAGGATGGCGTGGCAGATGTAGAGAA AGGAGACGGGGATGCTCCGGAGGTTGTGCAGTCTGCAAAAAAGCCAGCTGAAGGAGAGCT TCATCTGTACCCTGTTCCTGTCAGGACACAATCTGGTGAAAAGCTCGAGCTGCAGCTAAG CCCAGGAGATTCTGTTATTGATGTTAAACAATTCCTCTTGGATGCTCCTGAAACATGCTT CTACACATGCTATGATTTGATATTGCATACTGAAGATGGGTCAGCTCATCAGTTAGAAGA CTACAATGAAATATCTGAAATAGCAGATATAACTTCTGGTGGATGTTCACTGGAGATGGT TGCTGCAATATATGATGAGAGGTCTATTAGGTCACATCTCCGACGTGTGAGGGAGTTACT ATCTCTGTCTACTCTTCATGTTTCCCTATCGACATCCTTAACTCTGCAGCAGGAGTCTGC CCAGGGAAAATCTGCAGATTCTGGAAAAAGCCCTATTCAGGAGCTTGATGGTTTAAATTT TATGGAGGATAGTGCTGGTGCTCTCACTAATTTATTGGCATCTACACCAGCAGAGATAAA ATGTGTTGAAAGCATGGTTTTTTCTTCTTTCAATCCTCCGCCGACCTATCGGAGGTTACA TGGAGATCTCATCTATATTGATGTTGCTACATTGGAAGGAAACAAATACTGCATTACTGG AAGCTCCAAATCTTTTTATGTTAACAGTAGCAACAAAAATATATTTGACTCGAAACCTAC AAAACAAGGACTGGAGGCCAGCACTCTCGTAGGCCTACTACAGAAGATCAGTGCCAAATT TAAGAAAGGTTTTCGTGAAGTTTTGGATCGCAGGGCATCGGCTCATCCATTTGAGAATGT TCAGTCTTTGCTTCCAGTGACTTCTTGGCTAGGAGCGTATCCTGTGCCCGAACATAGAAG GGATGCAGCCAGGGCTGAAGATTCTGTTGTGTTGTCATATGGCACTGAGTTAATTGGCAT GCAAAGAGACTGGAATGAAGAATTGCAGTCCTGCCGGGAGTTTCCTCATGGCAATCCTCA AGAAAGGATACTGCGGGGCAGAGCGCTCTACAAAGTAACATGTGATTTTGTTGATGCTGC AGTAAAAGGTGCAGTTGGTGTCATCAATAGATGCATACCCCCAATAAATCCAACTGACCC AGAATGTTTTCATATGTATGTTCACAACAATATTTTCTTTAGTTTTGCTGTCGACTCCGA CTATGAAGACATTTCAAAGGACCACAAGCCAGATTGCCAAAATGGGTCCAGCAGAAGCAC CAAGGTTTCCTCCCCAGATGTGATAACTAAGCCAGATGCAAACCATGGCAAATCTGCTGA GGTAGTTGATTCAAAATCTGAAGAGGCACAACTCGCAGATAGTGAGCAGGCGACATATGC TTCTGCAAACAATGACTTAAAAGGAACTAAGGCTTATCAAGAAGCTGATGTTTCTGGCCT TCACAATCTTGCGATGGCAATAGTTGATTACAGAGGTCACAGGGTTGTAGCTCAGAGTAT AATACCTGGTATTCTTCAAGGAGACAAGTCCGATTCCCTTCTGTATGGTTCTGTTGATAA TGGCAAGAAGATATCTTGGAACGAAACGTTCCATTCTAAGGTTGTTGAGGCTGCAAAGCA GCTCCATTTGAAGGAACATGTGGTATTGGATGGTTCTGGCAATCCTATAAAATTAGCTGC TACAGTCGAATGCAAGGGTATTGTTGGGAGTGATGACAGACATTACATTTTGGATCTGAT GAGAGTGACTCCTCGAGATTCTAACTACATTGGACAAGAGCACCGCTTCTGTGTGTTGAG ACCTGAACTTATAGCATCATTTGTTGAGGTTGAATCCATAAAACAATCGTTGAAGCAAAA GGTTCCAGATGCTCCAGTTGCAAGTACTTCTGATGCTAAGGCTACCTCTGTTGAAGGAGA TGACAAGTCTGAAGAAAGCTCTGTTCATACACACGAGGAAAATGACAACTCAAGCTCCGA GATTCTTTTCAATCCGAATGTGTTTACAGAGTACAAGCTTGCTGGCAGTGCAGAGGAAAT CGCTGCTGACGAAGAGTTGGTAAAAAGGGCTGGTACATATCTTGTAGATATAGTGATCCC AAAGTTTGTTCAGGATCTTTGTTCCCTTGATATCTCCCCTATGGATGGACAGACTTTAAC AGATGCATTGCATCTCCATGGGATAAATATTAGGTATCTGGGCAAGATTGCAGGCATGGT CAAACATTTACCACACCTATGGGACTTGTTTTCTACTGAGATAATAGTTAGATCTGCAAA GCATGTTATCAAGGATATACTGAGACAAAGTTTGGACCATGATATTGCGCCAGCTATTGC TCATTTCTTAAACTGTTTCGTTGGGAAAGTTTTAGGTGCTTCCACAAAGAGTAGTCTTAG CAACGCACAGTCAAAAACTCTGAAGGGTCACGAAAATAGCCAAACTCAAAAGTCTACTAA AGGCCCTAAACTGAGCCATGCTGCCGTTTCAAGAAAAAGCTTATCAACTTATTCTCATCT AACCTCTGATGGAATTTGGTTTAGCATTAAGGAATTTGCAAAATCAAAATATCAGTTTGA AGTGCCAGATGAAGCTAGGCTTTCAGCCAAAAGGGTAGCTGTTCTCCGCAACCTATGCCG AAAGGTAGGAATAACAATTGCTGCACGAAAATATGATATGGATGCTTCAAGTCCATTTGA GGCCTCGGATATGTTAAATCTCCAACCAGTTGTCAAGCATTCTGTTCCAACCTGTACAGA TGCAAAGAATCTTATGGAAGCAGGGAAAGTCAGGATGGCTGAGGGAACATTGAATGAGGC ATATGCATTGTTTTCTGAAGCCTTTTCACTGCTTCAACAGATTACTGGTCCCATGCACAA GGATGCTGCAAATTGTTGCCGGTACCTTGCTATGGTTTTGTACCATGCTGGTGATACAGC CGGTGCAATTGTGCAGCAGCATAGGGAACTCATCATAAACGAGAGATGTCTTGGTCTTGA TCATCCGGACACAGCCCACAGTTATGGTAACATGGCCTTGTTCTATCATGGGCTCAATCA AACTGAATTGGCACTGCGGCACATGTCCCGTACACTGCTGCTGCTAAGTTTGGCGTCAGG ACCTGATCATCCAGATGTTGCAGCAACTCTCATAAATGTTGCAATGATGTACCAGGATGC CAGTAATATGAATACTGCTCTTAGGTATCTTCAAGAAGCCCTTATGAAGAATGAACGACT TCTTGGCCCTGACCATGTTCAAACAGCCGTATGCTATCATGCTCTTGCCATTGCATTCAG TTGTATGAGCTTATATAAGCTTTCAATTCAGCATGAAAAGAAGACCTATGATATACTGGT AAAACAATTAGG