Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d017811_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:5:207513991:207515469:-1 gene:Zm00001d017811 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat (PPR) superfamily protein
Sequence	ATGTCCGATCACCGAGCGAAGCGGCCGTCCGACGGCGCAGCCACTGTGGCATCGCCGGCG GCGAAGCGCGCCCGCGACCCGCCCGCGCCGGCGTTACCCACGAACAAGGAAGCTCCCGAC ATGGCCCCCAAGACCCGCATCTTCTGCGACATCCTGGCCTCCCGCGCCGACGACGAGGAA CTGAATGCCGAGCTCGACAAGGCCGACATCCGCGTAAGCATCGCTGACGTCGAGCAGGTG CTCCGCTTCTCCTACGCGCACCCGCGCGCCGCCGCCGCCTTCTTTCGCTGGGCGGGATAC CGGTACCTCGGCCACGAGCACTCCCCCTACTCGTGGAACCTCCTCGTCGACATCCTCGGT AAGAATCGCCTCTTCGAGCCCATGTGGGACACAGTCAAATCTATGCAGTCGCAGCAGCTG CTCTCGCTCGCCACTTTCGCCTCCATATTCTCCTCCCTGGCGGCGACCCCCGGCGGTTCC CCGCTCAAGGCGTTCATGGACATGCCCCGCTACGGCATGACCCGCGACACGCCGGCGCTC AACTCGCTCCTCTCCGCGCTGTGTCGTGCCAACCGCCTCGACGACGCTCGCGCCGCGATC CCAGTAGCCCGCGCCGAGGCTGGCACGCGCCCGGATGCCGACTCCTACGCCATCCTCCTC GAGGGCAGCGAGGCCGCCGCCGACCTGCGGGTTGCGCGCGAGGTGTTCGACGAAATGGTG CAGGCCATTGGATTTTATCCTGACAACGTGCCTGCCTATGACTCCTTCCTCACTACGCTT GTTTCAAGTGACTCCTCCACGGCGCTACCGGAAGCAATGGAGTACCTAAATGTCTTGAGC AGGCACGGCTGTTCGCCAGGAGAGAAGTTCTTCCGTGCTGCTCTTGCTGCACACCTTGAT GCACGACAATTGCGCGGAGCCATGAATCTCTGGGATGACTTTGTTGGGCGTCGAGGACTC GTCCCAGATATGGAAATGTACAACACAATGATCAAGCTGCAGGGCAGTCTCGGGCATGCT GAGCTGATAGTGGGTTATCTCGACGACATGATCTCCAATGGAGTCTTCCCTGATACCAAC ACATACAATGTGGTCCTCCAGCTTTTGTTGAAGGGAAAGAAGCACCGAGAGGCAGCCGCA ATATTTAGCGAGATGGTCAAGAACGAATGTTGGCCAAACGAGGGAAATTGTTCACTTGCA CTTCGCATGTTTTTGGATACACACTATTGGGAGACTGGGATCAAAGTCTGGTGCTGCATG GTGGAGAATGGCTTGCCACCTTTACAGGAGTGTGGGAACATGCTTGTAGCAAAGCTGAAG GATGACAGGCTACCTGAGGCATGCAAATATGCAGAAGACATGATTGATCGGGGTATCAAG TTGAGTTCAGCGACACTGTCCAAGCTGAAGCAGCGCCTGCAGAGGATTAAGAAAGGAGAG ATCCATGATCACCTGCTTGCAAAATGGAAGGCACATTAG

Peptide Sequence

PEP ID	Zm00001d017811_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:5:207513991:207515469:-1 gene:Zm00001d017811 transcript:Zm00001d017811_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat (PPR) superfamily protein
Sequence	MSDHRAKRPSDGAATVASPAAKRARDPPAPALPTNKEAPDMAPKTRIFCDILASRADDEE LNAELDKADIRVSIADVEQVLRFSYAHPRAAAAFFRWAGYRYLGHEHSPYSWNLLVDILG KNRLFEPMWDTVKSMQSQQLLSLATFASIFSSLAATPGGSPLKAFMDMPRYGMTRDTPAL NSLLSALCRANRLDDARAAIPVARAEAGTRPDADSYAILLEGSEAAADLRVAREVFDEMV QAIGFYPDNVPAYDSFLTTLVSSDSSTALPEAMEYLNVLSRHGCSPGEKFFRAALAAHLD ARQLRGAMNLWDDFVGRRGLVPDMEMYNTMIKLQGSLGHAELIVGYLDDMISNGVFPDTN TYNVVLQLLLKGKKHREAAAIFSEMVKNECWPNEGNCSLALRMFLDTHYWETGIKVWCCM VENGLPPLQECGNMLVAKLKDDRLPEACKYAEDMIDRGIKLSSATLSKLKQRLQRIKKGE IHDHLLAKWKAH

Transcript Sequence

Transcript ID	Zm00001d017811_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:207513991:207515469:-1 gene:Zm00001d017811 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat (PPR) superfamily protein
Sequence	ATGTCCGATCACCGAGCGAAGCGGCCGTCCGACGGCGCAGCCACTGTGGCATCGCCGGCG GCGAAGCGCGCCCGCGACCCGCCCGCGCCGGCGTTACCCACGAACAAGGAAGCTCCCGAC ATGGCCCCCAAGACCCGCATCTTCTGCGACATCCTGGCCTCCCGCGCCGACGACGAGGAA CTGAATGCCGAGCTCGACAAGGCCGACATCCGCGTAAGCATCGCTGACGTCGAGCAGGTG CTCCGCTTCTCCTACGCGCACCCGCGCGCCGCCGCCGCCTTCTTTCGCTGGGCGGGATAC CGGTACCTCGGCCACGAGCACTCCCCCTACTCGTGGAACCTCCTCGTCGACATCCTCGGT AAGAATCGCCTCTTCGAGCCCATGTGGGACACAGTCAAATCTATGCAGTCGCAGCAGCTG CTCTCGCTCGCCACTTTCGCCTCCATATTCTCCTCCCTGGCGGCGACCCCCGGCGGTTCC CCGCTCAAGGCGTTCATGGACATGCCCCGCTACGGCATGACCCGCGACACGCCGGCGCTC AACTCGCTCCTCTCCGCGCTGTGTCGTGCCAACCGCCTCGACGACGCTCGCGCCGCGATC CCAGTAGCCCGCGCCGAGGCTGGCACGCGCCCGGATGCCGACTCCTACGCCATCCTCCTC GAGGGCAGCGAGGCCGCCGCCGACCTGCGGGTTGCGCGCGAGGTGTTCGACGAAATGGTG CAGGCCATTGGATTTTATCCTGACAACGTGCCTGCCTATGACTCCTTCCTCACTACGCTT GTTTCAAGTGACTCCTCCACGGCGCTACCGGAAGCAATGGAGTACCTAAATGTCTTGAGC AGGCACGGCTGTTCGCCAGGAGAGAAGTTCTTCCGTGCTGCTCTTGCTGCACACCTTGAT GCACGACAATTGCGCGGAGCCATGAATCTCTGGGATGACTTTGTTGGGCGTCGAGGACTC GTCCCAGATATGGAAATGTACAACACAATGATCAAGCTGCAGGGCAGTCTCGGGCATGCT GAGCTGATAGTGGGTTATCTCGACGACATGATCTCCAATGGAGTCTTCCCTGATACCAAC ACATACAATGTGGTCCTCCAGCTTTTGTTGAAGGGAAAGAAGCACCGAGAGGCAGCCGCA ATATTTAGCGAGATGGTCAAGAACGAATGTTGGCCAAACGAGGGAAATTGTTCACTTGCA CTTCGCATGTTTTTGGATACACACTATTGGGAGACTGGGATCAAAGTCTGGTGCTGCATG GTGGAGAATGGCTTGCCACCTTTACAGGAGTGTGGGAACATGCTTGTAGCAAAGCTGAAG GATGACAGGCTACCTGAGGCATGCAAATATGCAGAAGACATGATTGATCGGGGTATCAAG TTGAGTTCAGCGACACTGTCCAAGCTGAAGCAGCGCCTGCAGAGGATTAAGAAAGGAGAG ATCCATGATCACCTGCTTGCAAAATGGAAGGCACATTAG