Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d017810_T027
CDS Infomation

cds chromosome:B73_RefGen_v4:5:207491721:207497046:-1 gene:Zm00001d017810 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGTGGCTGAACGGTTGGAAAACGTTGAGGAACAAACTGAAGATTTGGCACCAGAGTTT
GCCCTTCCACCCAAAGCAAATACTTTAGTTTCTGAGCTGCTAGATAATTTACAGCGTAGG
GGTGGTTCTTTTGTCAGGACACCATCTTTGTTGCACCAACATGCTCCAAGCATATCAATC
AGGGAGCAGGAAGTTTCATCCGGAGTGCCACCAACTAAAGCTTCACAAGCTTTGATGGAT
GAACCGTTTGAAAATGACAATGGACAAACTGAAGAGTTGCCATCAGAGCTCCCCTGCTCG
ATCAAGAGACCAAAATTTTCAGTTGCAGAACTTCTAGAAGACCTACAGGGTAGAAGTGGT
TCTTATGTTGAGACAGCATCTTTGTCACACCAACACACCAGAGCTAAACATTGGAAGCCA
AAGTTCCTTTCTTCCGAGAAGAAAACAATAGCTATTCTAGGAGACAGGAGTATTGACAGT
GAGGACCCCTTGGAGCATGTAATTGACGGAACATCTAGCGAGGAGGAAGATGCTACTCAA
AACCACTTGAGTTTGGTGAACAAAGATGAGAACCAGCAAACTATGGCTGACCTATTTCAA
GAAGTTTTTAATCCAACAAACATGGATGGTGCCATGAAATCAATGAGATCAACAGGAGCT
GGTAACTATGGAAGAATGCAACAGATTATGCACATGGAGAAAGATTGGCATGTGGAATTC
TCGAGGCAGTATAGCAGAGAGCACAGTTATTCAGGTGATTTAAAGGGAACTACTGTTCAG
ATTATGTCAAGGTCATTGGAAGGAAAGCTAACAGTCTGCAGCTGCATGTTCCAGGAAAAG
GGCAATGATGCCACTATAAGTAATGCCTCAGCAGACGGCACCATGGATGAAAGCAGAACT
AGGAGGACTATTATCTTCAGTCCAAAGATATGTAACAATGTAGATCTTCTGGTTGGAAAC
ATAATTCATATCTTCCCACCATGGAAGGAAGTTAAAATACAAGAAGAGCATGTGATTATT
TGCACCTACTTCTCGCACCACCACCGGACTTGA

Peptide Sequence

PEP ID

Zm00001d017810_P027
PEP Infomation

pep chromosome:B73_RefGen_v4:5:207491721:207497046:-1 gene:Zm00001d017810 transcript:Zm00001d017810_T027 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MVAERLENVEEQTEDLAPEFALPPKANTLVSELLDNLQRRGGSFVRTPSLLHQHAPSISI
REQEVSSGVPPTKASQALMDEPFENDNGQTEELPSELPCSIKRPKFSVAELLEDLQGRSG
SYVETASLSHQHTRAKHWKPKFLSSEKKTIAILGDRSIDSEDPLEHVIDGTSSEEEDATQ
NHLSLVNKDENQQTMADLFQEVFNPTNMDGAMKSMRSTGAGNYGRMQQIMHMEKDWHVEF
SRQYSREHSYSGDLKGTTVQIMSRSLEGKLTVCSCMFQEKGNDATISNASADGTMDESRT
RRTIIFSPKICNNVDLLVGNIIHIFPPWKEVKIQEEHVIICTYFSHHHRT

Transcript Sequence

Transcript ID

Zm00001d017810_T027
Transcript Infomation

cdna chromosome:B73_RefGen_v4:5:207491721:207497046:-1 gene:Zm00001d017810 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GCCGCCTCCCCAGTCCGGCGTGCATCAGCAGCGACATCAGAGTCGGCGATGGGAGGCGTC
ATCGACGTTCTCGTCCCCTTATGTTGATGAAGTGGTGTGCCGTGGAGATTCCTTGACCGA
TTTCTTGCCGGTAAGACGGAGTCTGCCATCTGCGTGGCTGGTCATCGCGGTGAGCAAGGA
ACGACGAAGTGCGCCCCTCCGCCCTTCGGCTCGTCGTTGTGCCTTGCGTCGTCGGGTGGA
GTTCCTTCCCCTGCTTCAAGCTAATTCGGTTTTTCCCTCTCATCCTGTCAGTTTTCTCTT
TGTTGGCATTTTCGGTTCTCTGCTGTGAGGTTTTTTAAGGTGATTTTGTTCGCATCTGTG
ATTTGTGTCTCTGTGTTCATCGTTTGATGAGGGATTCGATGCCAAATTCATTTGAATCGA
TTACAGGAAATCATGCAAAAAATCAAACACATACCTGTAGAATTGCGTTGGATTGGATTC
CAAAAAATAATGAAGGAAAAAGGAAAAACAAATCTGATCCGATTTTGTGGCCTGCATGCT
TACTAACTTCGTTTTTAAGAGGCTCCAGGAAAATGTAATTTTGGGTAGGGTTTGTCAAGC
GGTGGTGCCTGAATGTATCTTCTCCTGTCACCTCCCTCCTTTCACATTAGAGTTATTGGG
TCTACCTTTACTGGGTCTACTCCTGGATCCTGCTCTATTTAATTATCCTTTTTTGTGCCA
AAGCAGCCAAACCGCCAATCACCACAAATTGTAGATTAATGTTTCCAGCATTAGCTTGCT
GCTCCTGGTTCCATACCTGCAATCAGTTGCAAATACACCATGTTTTGTACTACCCCCTCC
CCCAATTAAACTTTATAATTAAATGAAAAAGTGTAGGAGTTTGCCTAGTGACCACAAAGC
ATTTTTTGGTGCATTGGAATCTTGTGTATGCTTGAATTTAAAATTATGAATTCAAATGTT
GTTGAATTACATGCAGGACCCATAAACTTTGAATTATTATGATGTGAAAAATGATTTATA
ATACAGTATGTGCACAAGTGTAGATAGATATAAGAAAATGAAATATAGGGGAAGGGATCA
TTGGTAGTGTCACCCTAAAGTGCTGGAAAAGTTTTAAGGTGCTTCCCATAGAACAACTTC
TTGGGGGAGCACTATTGGTATGGAATTGCTCTTATTCAGTTTTTTTGGGGTTTCTGAGGA
TCCTCCATGTCCCCTAGATTATTGACCTCACTTTGTTCTTTGTATCGATTTATTGTTGTA
GGCAGTTATAATAGTAGGAGGTATGCGTGCTTTGTAGAATCATACAGATGCTTGTTGAAC
ATGTGTCTTTGTTTCTGTGTCTGTGTCAACAAGATGTTCTAGCATCAACAAGATCCTGAT
TAGCATGTCAACTTCCAGACAAAAAGAGTAGAGCAGCAAAATGGAGAACCATGGAAAATT
GGATGGGTGGGATGAAGTTCTGGAAGAAGAAGATGAGTTAGCGAGTGTATGCAAATATCC
TAAGAATGTTGTGAGCAAAGGAGGACTTTGTTTTGTTAAACTATACCAGGTGGACAATCT
AATGGGGCAAAAGTGTAAAGAAGCCTAGATTCTCATTACGAGGATATGATTTTGTTCCAT
TAGATGTTAAGACTGATAACTTGTGCATTGGGGAGCAAGATGGTTCTTCTGCAGTGCCAT
CAACTAAAGCTTCACAAACCATGGTGGCTGAACGGTTGGAAAACGTTGAGGAACAAACTG
AAGATTTGGCACCAGAGTTTGCCCTTCCACCCAAAGCAAATACTTTAGTTTCTGAGCTGC
TAGATAATTTACAGCGTAGGGGTGGTTCTTTTGTCAGGACACCATCTTTGTTGCACCAAC
ATGCTCCAAGCATATCAATCAGGGAGCAGGAAGTTTCATCCGGAGTGCCACCAACTAAAG
CTTCACAAGCTTTGATGGATGAACCGTTTGAAAATGACAATGGACAAACTGAAGAGTTGC
CATCAGAGCTCCCCTGCTCGATCAAGAGACCAAAATTTTCAGTTGCAGAACTTCTAGAAG
ACCTACAGGGTAGAAGTGGTTCTTATGTTGAGACAGCATCTTTGTCACACCAACACACCA
GAGCTAAACATTGGAAGCCAAAGTTCCTTTCTTCCGAGAAGAAAACAATAGCTATTCTAG
GAGACAGGAGTATTGACAGTGAGGACCCCTTGGAGCATGTAATTGACGGAACATCTAGCG
AGGAGGAAGATGCTACTCAAAACCACTTGAGTTTGGTGAACAAAGATGAGAACCAGCAAA
CTATGGCTGACCTATTTCAAGAAGTTTTTAATCCAACAAACATGGATGGTGCCATGAAAT
CAATGAGATCAACAGGAGCTGGTAACTATGGAAGAATGCAACAGATTATGCACATGGAGA
AAGATTGGCATGTGGAATTCTCGAGGCAGTATAGCAGAGAGCACAGTTATTCAGGTGATT
TAAAGGGAACTACTGTTCAGATTATGTCAAGGTCATTGGAAGGAAAGCTAACAGTCTGCA
GCTGCATGTTCCAGGAAAAGGGCAATGATGCCACTATAAGTAATGCCTCAGCAGACGGCA
CCATGGATGAAAGCAGAACTAGGAGGACTATTATCTTCAGTCCAAAGATATGTAACAATG
TAGATCTTCTGGTTGGAAACATAATTCATATCTTCCCACCATGGAAGGAAGTTAAAATAC
AAGAAGAGCATGTGATTATTTGCACCTACTTCTCGCACCACCACCGGACTTGATACTCGG
AGATATTTCTGTGCTAGCTGCAAAGCTAGAGGCAGACCGCCAGCATAACCGTTGCTGACA
GTTTAATGTTGATGTACTCGCAGGGTCTATTCTGTTTGTTTTGTAATCACAAGTGTACTG
GCTGCAAAGCTATAGGCAGACCGCAAGCATAACCGTTCCTGATAGCCTAATGCTGATGTA
CTTGCAGTCTCTCTTCTGTTTTACAATCACAAGTTACTGAGGC