Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d017780_T004
CDS Infomation	cds chromosome:B73_RefGen_v4:5:206546458:206552285:-1 gene:Zm00001d017780 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ubiquitin-protein ligase
Sequence	ATGATTCAGGCTATTACCGGAGAGACGATTGTAGCAAGATGTGAAAGAATAAGAGACTCA CTGAGGCGGAGTTTGTTCCTTATTCAGAATATGGTTCCACCAGCACTAGCTAATCAGATT GCTGAAGTCCACAATGATCTCCGGGATGTCAAATTTCTTCTTGATCCAATGGAAGAAGAG GCTGGCAAAGCCATGTTACAGATGCTCCGGCAGTCTGACGCAAGTGAAGAATTAGAACTT GAGACATTCCTGCAGGCTGCTTCAAAGTTGGAGCTGACATCTCCTAAAGAAGTCTTAATT GAAAGACGAGCAATCAAGAAACTGCTTGGAAAAGTTAGTGGTAATGATGCAAAAAAGGAG GGGGTCCTTAAGTTTTTCATGTACCTCATTAAGAAGTATGGAAAGATCATCAGACAGGAC TCTGGCGAACAGAATGAGAATTTGCAATCTGAAAGTCAATCTTTAACTCTGAGCACACCT TCCTGTGATGCCAGTGCTCCTGGAAAATGTTACACACCAACAGACTTTCAGATTTATGAG GATCACAGTAATATGTCTGGTGCAGCTACTCCACCTCCAGAGTTCTGCTGCCCAATATCA ACAAAGATAATGCATGATCCTGTTATAATAACATCTGGACAGACTTATGAAAGAGAATAT ATTGAGAGGTGGTTTAATGAAGGATATGATACTTGTCCTAGGACACAGATGAAGCTAGAG AACTTCTCCATGATCCCAAATACCTGCATGAGAGATCTCATTTGCAATTGGTGCAAAGAG CATGGTTTTACAGTTTCCGATTTTATTCCTCCAAATGAAAATGCTTACAGTTACTTACCA GAGCAATTGCATGGTTACTCTATGTCAAGTTTGCACAATGTTTCGGTACCTCTCATTGCT GGAAAGGCCAACAGTTATGTGATTGATCACAGCAATACGTCTGTTGCATTATCTGATGCC AGTTTTGTCTCTAATGCATCCCACGCTAGGGACATGGAGGATTCAAAAGATATTTCTCAG TTCTCTTGGAACGCCGACTATCAAAAGTACCTGTCGTTCCACAACTTCAACCAGGAGATG TTCCTGAAGTTCTTTCATGAGCTGTCCATGCTCCCATTCGAACTGCAAGACAAGTCAATT AAAGATTTGAAGAACGTTCTCGATTATGGAAGTGAGATTTCATATGATATGATGTCAAAT GGGTTTGTTGAAGCATTCCTTGAATTCTTGAGAAACGATACTGGCAGCTACAGTGTGCAA GATCAGGAAGCTGGATTTCGGTTTTTTCTTGCTTTTATTTCCAATAGCAGGTAA

Peptide Sequence

PEP ID	Zm00001d017780_P004
PEP Infomation	pep chromosome:B73_RefGen_v4:5:206546458:206552285:-1 gene:Zm00001d017780 transcript:Zm00001d017780_T004 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ubiquitin-protein ligase
Sequence	MIQAITGETIVARCERIRDSLRRSLFLIQNMVPPALANQIAEVHNDLRDVKFLLDPMEEE AGKAMLQMLRQSDASEELELETFLQAASKLELTSPKEVLIERRAIKKLLGKVSGNDAKKE GVLKFFMYLIKKYGKIIRQDSGEQNENLQSESQSLTLSTPSCDASAPGKCYTPTDFQIYE DHSNMSGAATPPPEFCCPISTKIMHDPVIITSGQTYEREYIERWFNEGYDTCPRTQMKLE NFSMIPNTCMRDLICNWCKEHGFTVSDFIPPNENAYSYLPEQLHGYSMSSLHNVSVPLIA GKANSYVIDHSNTSVALSDASFVSNASHARDMEDSKDISQFSWNADYQKYLSFHNFNQEM FLKFFHELSMLPFELQDKSIKDLKNVLDYGSEISYDMMSNGFVEAFLEFLRNDTGSYSVQ DQEAGFRFFLAFISNSR

Transcript Sequence

Transcript ID	Zm00001d017780_T004
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:206546458:206552285:-1 gene:Zm00001d017780 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ubiquitin-protein ligase
Sequence	AGGCGCGAGAGATACAGGAGAGAAACCGCAGGGCCGCCGCCGCCTTCCCTGATCGACCGC TCCCGCGTGCGGATTCAGGCGCCGGGCTTTCCAGCCATGGTTCAGTGAGCCGGGAGGAAT CCTTGCGCTGCCGGAGAAGGATTATATTCGTCGGTGGACAGGAGGTCCCTGCGTGCATCG ATCGTCTCCCGGGTTTCCGAGAGCACCCTCCGCCCCCGGATTCACTGCTTCGATTGATTC GTCAAGCAAGCACAGGGATATCTTCACGAGAAGTGTCATCATCAAGATTGACAGCCTTCT TCGTGGATGGCGAATGGTAACAATGAAGTGATGGGTATATCTCAGCGCAAATCTTGCCCC AAGGTTCACAGCTCAATGTGTAGTGAGCTGACAATGATGTTGGATAAGGTCTCTTCTATT CTTCCATCAATAGAGGCTGCACGACCAGGTTGTAAAGCAGGCATACAGGAATTATGCAAT CTATACAATGTTGTCGAGAAAGGGAGGCTCATAATCATACACTGCATTGACTGTAGTAAG CTCTATTTGGTACGATGTCTTGACGGGAAACTAAGTATTCTGATATCCTATGTATATTAT TCTCATACCTTCATTTTTTCATTGATGATTTTGGATATTCATGATTCAGGCTATTACCGG AGAGACGATTGTAGCAAGATGTGAAAGAATAAGAGACTCACTGAGGCGGAGTTTGTTCCT TATTCAGAATATGGTTCCACCAGCACTAGCTAATCAGATTGCTGAAGTCCACAATGATCT CCGGGATGTCAAATTTCTTCTTGATCCAATGGAAGAAGAGGCTGGCAAAGCCATGTTACA GATGCTCCGGCAGTCTGACGCAAGTGAAGAATTAGAACTTGAGACATTCCTGCAGGCTGC TTCAAAGTTGGAGCTGACATCTCCTAAAGAAGTCTTAATTGAAAGACGAGCAATCAAGAA ACTGCTTGGAAAAGTTAGTGGTAATGATGCAAAAAAGGAGGGGGTCCTTAAGTTTTTCAT GTACCTCATTAAGAAGTATGGAAAGATCATCAGACAGGACTCTGGCGAACAGAATGAGAA TTTGCAATCTGAAAGTCAATCTTTAACTCTGAGCACACCTTCCTGTGATGCCAGTGCTCC TGGAAAATGTTACACACCAACAGACTTTCAGATTTATGAGGATCACAGTAATATGTCTGG TGCAGCTACTCCACCTCCAGAGTTCTGCTGCCCAATATCAACAAAGATAATGCATGATCC TGTTATAATAACATCTGGACAGACTTATGAAAGAGAATATATTGAGAGGTGGTTTAATGA AGGATATGATACTTGTCCTAGGACACAGATGAAGCTAGAGAACTTCTCCATGATCCCAAA TACCTGCATGAGAGATCTCATTTGCAATTGGTGCAAAGAGCATGGTTTTACAGTTTCCGA TTTTATTCCTCCAAATGAAAATGCTTACAGTTACTTACCAGAGCAATTGCATGGTTACTC TATGTCAAGTTTGCACAATGTTTCGGTACCTCTCATTGCTGGAAAGGCCAACAGTTATGT GATTGATCACAGCAATACGTCTGTTGCATTATCTGATGCCAGTTTTGTCTCTAATGCATC CCACGCTAGGGACATGGAGGATTCAAAAGATATTTCTCAGTTCTCTTGGAACGCCGACTA TCAAAAGTACCTGTCGTTCCACAACTTCAACCAGGAGATGTTCCTGAAGTTCTTTCATGA GCTGTCCATGCTCCCATTCGAACTGCAAGACAAGTCAATTAAAGATTTGAAGAACGTTCT CGATTATGGAAGTGAGATTTCATATGATATGATGTCAAATGGGTTTGTTGAAGCATTCCT TGAATTCTTGAGAAACGATACTGGCAGCTACAGTGTGCAAGATCAGGAAGCTGGATTTCG GTTTTTTCTTGCTTTTATTTCCAATAGCAGGTAAGGTGACTTGTTATTATGCTTATAGAA TATGCACCCTTGCTTTATTACTCTTATGTTGGGCGTTCAGTAACATGAACATATGTATTT CCATACTTTTTTACCTTTTTTAGTTTAAAATGGCAAAATAGGCTTACACTTACAACCACC CTGCTTTATCACTAAATTTATGTATTCTGTTACTTAGTTGATCTCGGGCAGTCACTTATA TTCATACATCATATTTCATGAGATTTTTTTTGAACATATCTTTTCTTACATGTAGGGCTA AAGTTCAATCTCTGCACGAAGAATCATTTCACCTGATCACATCCTTCCTTGACTCCGAGT TGAAAGTCGAAGCTTTGCTGACGCTGCTTGAGTTGATTAAGCACTCGAGTTGTCCGAAAT CTCATGTGATGGCCTCTGTTGTTACTCCTCCACTGTTCAAAATACTGGCATCTGAAGATA CCGAAGGCCTCGAATTGTCTCTGAAGATCATCTGCGAGCTTTCATCCGACGCCGATATAA GATCTTCGTTAGTTTCAATGGGAATAATCTCGAAGCTTGTTCCCATTTTAACCGAAGGAA ACTTCGTCGAGCGCTGTTTGGAGATCCTGCGGAACTTAAGCGACATGGAAGAAGCTGTAG CGCGGATCACAAGAACCGACCGGTGCCTTGCTTCGGTAGCAGAATATCTGGACACAGGAA GCCCCACGGAGCGACAGCACGCGGTGGTTATACTTTTAGCGGTATGTTCGTGCAGCGCCG AGGACTGTCTGCTTGTAATGAAGGAAGGCGTGATCCCCGCCCTAGTGGACCTGTCGGTGA ACGGAACCGAAGAAGCGAAGGGCTGTTCGACGAAGCTGCTTCATCTTCTCCGGGACATGA GGCGAAGCGACCAGTTCACCAACTCGTGCTCACAAGAAGTGGCTGCCACAGGCATGGTAG TAGAGGATGCTCCCAAGAACTCGGTTCACAAGCAGCCTGCGTCGAAGTCGTCCAGGTTTT TCCAGAGGAAACTGAACATCTTCTCGAAGCCTCGGTCGCTCACGCTGTTCTGAAACCCGG TTTGTGTTTGTCGGAGCTGGTAGTCCTTTTTTAGTGGAAAGGGAAAGCGGAGTAGTCCTT GACTCCTTCCTTGTACATGCATGCTGCAAAACTAACCACCTTCTGTGTAGATGGTAGCGC TTGTGTTTGCCCCGGTGAGATGCTTGATGAGATGATAGTTTTTCATCCTCATGTGTTTCA GTAGAGCTTGTTAGTTGCTACAGAACTGTCCTGTGTGC