Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d017770_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:5:206299764:206304028:-1 gene:Zm00001d017770 gene_biotype:protein_coding transcript_biotype:protein_coding description:Soluble inorganic pyrophosphatase 2
Sequence

ATGGCTGGACCTGCTGTTCTCAATGAGCGTATCCTTTCTTCCATGTCCCAGAAACATGTT
GCTGCTCACCCATGGCATGATTTGGAGATAGGACCAGGGGCTCCTGAATTCTTCAATTGT
GTGGTTGAGATTCCTAGAGGCAGCAAGGTTAAGTACGAGTTGGACAAGGCATCTGGTCTG
ATCAAGGTGGACCGTGTTCTTTATTCCTCTGTTGTTTACCCACATAACTATGGCTTCATT
CCACGCACACTCTGTGAGGATAACGACCCCCTGGATGTCCTCATACTGATGCAGGAACAA
GTTGTCCCTGGGTGTTTCCTGCGAGCTCGTGCTATTGGGCTCATGCCTATGATCGATCAG
GGCGAGAAAGATGATAAGATTATAGCAGTCTGTGCTGATGACCCTGAATTCCGTCACTAC
ACGGACATCACGGACCTCCCACCGCATCGCCTTCAAGAGATCCGCCGCTTTTTTGAAGAT
TATAAAAAGAATGAAAACAAAGAGGTCGCAGTGAATGAGTTCCTGCCAGCGAAAGATGCC
ATCAACGCAATCAAGTACTCGATGGACCTGTATGGCTCATACGTCATCGAAAGCCTGAGG
AAGTGA

Peptide Sequence

PEP ID

Zm00001d017770_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:5:206299764:206304028:-1 gene:Zm00001d017770 transcript:Zm00001d017770_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Soluble inorganic pyrophosphatase 2
Sequence

MAGPAVLNERILSSMSQKHVAAHPWHDLEIGPGAPEFFNCVVEIPRGSKVKYELDKASGL
IKVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLILMQEQVVPGCFLRARAIGLMPMIDQ
GEKDDKIIAVCADDPEFRHYTDITDLPPHRLQEIRRFFEDYKKNENKEVAVNEFLPAKDA
INAIKYSMDLYGSYVIESLRK

Transcript Sequence

Transcript ID

Zm00001d017770_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:5:206299764:206304028:-1 gene:Zm00001d017770 gene_biotype:protein_coding transcript_biotype:protein_coding description:Soluble inorganic pyrophosphatase 2
Sequence

GGAATTCGGAAATATCACACTGATCCGGCCTGGAGCGCTGGACAGCAGCAGCAGCATCGA
GCTCGAGGCCGCTCCGCCACCCCGCACTCGCCTGTCGCCTCTTCTCGCTTTCGCCACCGG
GGCAGCGCTCCGCCATGGCTGGACCTGCTGTTCTCAATGAGCGTATCCTTTCTTCCATGT
CCCAGAAACATGTTGCTGCTCACCCATGGCATGATTTGGAGATAGGACCAGGGGCTCCTG
AATTCTTCAATTGTGTGGTTGAGATTCCTAGAGGCAGCAAGGTTAAGTACGAGTTGGACA
AGGCATCTGGTCTGATCAAGGTGGACCGTGTTCTTTATTCCTCTGTTGTTTACCCACATA
ACTATGGCTTCATTCCACGCACACTCTGTGAGGATAACGACCCCCTGGATGTCCTCATAC
TGATGCAGGAACAAGTTGTCCCTGGGTGTTTCCTGCGAGCTCGTGCTATTGGGCTCATGC
CTATGATCGATCAGGGCGAGAAAGATGATAAGATTATAGCAGTCTGTGCTGATGACCCTG
AATTCCGTCACTACACGGACATCACGGACCTCCCACCGCATCGCCTTCAAGAGATCCGCC
GCTTTTTTGAAGATTATAAAAAGAATGAAAACAAAGAGGTCGCAGTGAATGAGTTCCTGC
CAGCGAAAGATGCCATCAACGCAATCAAGTACTCGATGGACCTGTATGGCTCATACGTCA
TCGAAAGCCTGAGGAAGTGATCTCCAGCTGCTTGATTGTGGTTGTGGATGCTACACCATT
TTCTCAACAGCTCATCCAGAGTACCGTAGTACAGACTTAACACGAACGAACTGTAATCGT
GACCAAGGGATGCTATTACCTTCTGCTCATGTTGAAACAATCAGCAGTGCCTTTCTTTCC
ATTATATGCCATGTCGAATCAAGGCAACTTGGCCCTGAAATCTTTGTGGTCAAGTTAAAC
CAGCACTTTGACAGAACAAGGATTGCTGGATGCCTGGATTACTGTTACATAAATGACCAT
TACTGAACT