Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d017727_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:5:205304084:205306760:-1 gene:Zm00001d017727 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:alternative oxidase1 description: alternative oxidase1
Sequence	ATGAGCACCCGCGCGGCAGGATCCGCCCTCCTCCGCCACCTGGGTCCGCGCGTCTTCGGC CCAGTTTTTTCTCCGGCGGTCGCGCCGCCGAGGCCACTGCTGGCCTTGGCCGGCGGCGGG GAACGGGGCGGGGCGCTCGTGTGGGTGCGGGTGCGGCTACTGTCCACCTCCGCCGCCGAG GCGAAGGAGGAGGTGGCGGCGTCCAAGGGGAACTCAGGAAGCACCGCGGCGGCGAAGGCG GAGGCGGTGGAGGCCGCTAAGGAGGGTGACGGAAAGAGAGACAAAGTGGTGAGCAGCTAC TGGGGCGTCGCGCCGTCGAAGCTGATGAACAAGGACGGCGCCGAGTGGAGGTGGTCTTGC TTCAGGCCATGGGAGGCGTACAAGCCGGACACCACGATCGATCTCAACAGACACCACGAA CCCAAGGTGCTGCTCGACAAGATCGCCTATTGGACCGTCAAATTACTGCGCGTGCCCACC GACATATTCTTCCAGAGGAGGTACGGCTGCCGTGCTATGATGCTGGAAACAGTGGCGGCG GTGCCGGGGATGGTGGGCGGCATGCTGCTTCACCTGCGCTCGCTCCGCCGCTTCGAGCAC AGCGGCGGCTGGATCCGGGCGCTGCTGGAGGAGGCGGAGAATGAACGCATGCACCTCATG ACCTTCATGGAGGTGGCCAAGCCCAAGTGGTACGAGCGCGCGCTTGTCCTCGCCGTGCAG GGCGTCTTCTTCAACGCCTACTTCCTCGGCTACCTCATCTCCCCCAAGTTCGCGCACCGT GTCGTTGGGTACCTCGAGGAGGAGGCCATCCACTCATATACCGAATACCTCAAGGACCTC GAGGCCGGCAAGATCGAGAACGTCCCCGCGCCGGCCATTGCCATCGACTACTGGCAGCTC CCAGCTGATGCGACGCTCAAGGATGTGGTTGTCGTGGTGCGCTCCGACGAGGCGCACCAC CGCGACGTCAATCACTTTGCGTCGGACATACATTTCCAGGGTATGCAGCTCAAGGAGACA CCTGCACCGATTGAGTACCATTGA

Peptide Sequence

PEP ID	Zm00001d017727_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:5:205304084:205306760:-1 gene:Zm00001d017727 transcript:Zm00001d017727_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:alternative oxidase1 description: alternative oxidase1
Sequence	MSTRAAGSALLRHLGPRVFGPVFSPAVAPPRPLLALAGGGERGGALVWVRVRLLSTSAAE AKEEVAASKGNSGSTAAAKAEAVEAAKEGDGKRDKVVSSYWGVAPSKLMNKDGAEWRWSC FRPWEAYKPDTTIDLNRHHEPKVLLDKIAYWTVKLLRVPTDIFFQRRYGCRAMMLETVAA VPGMVGGMLLHLRSLRRFEHSGGWIRALLEEAENERMHLMTFMEVAKPKWYERALVLAVQ GVFFNAYFLGYLISPKFAHRVVGYLEEEAIHSYTEYLKDLEAGKIENVPAPAIAIDYWQL PADATLKDVVVVVRSDEAHHRDVNHFASDIHFQGMQLKETPAPIEYH

Transcript Sequence

Transcript ID	Zm00001d017727_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:205304084:205306760:-1 gene:Zm00001d017727 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:alternative oxidase1 description: alternative oxidase1
Sequence	AAACACTGAAACACTAGTACCACAGTAGCAGCGAGGAGCAAACAGCAAAGCACGCTCTGG AGAAATCCCTCGTCTACCTTCACCAGTTGACCGCACTAGTGGCCGTCGTCCGACCACGAT GAGCACCCGCGCGGCAGGATCCGCCCTCCTCCGCCACCTGGGTCCGCGCGTCTTCGGCCC AGTTTTTTCTCCGGCGGTCGCGCCGCCGAGGCCACTGCTGGCCTTGGCCGGCGGCGGGGA ACGGGGCGGGGCGCTCGTGTGGGTGCGGGTGCGGCTACTGTCCACCTCCGCCGCCGAGGC GAAGGAGGAGGTGGCGGCGTCCAAGGGGAACTCAGGAAGCACCGCGGCGGCGAAGGCGGA GGCGGTGGAGGCCGCTAAGGAGGGTGACGGAAAGAGAGACAAAGTGGTGAGCAGCTACTG GGGCGTCGCGCCGTCGAAGCTGATGAACAAGGACGGCGCCGAGTGGAGGTGGTCTTGCTT CAGGCCATGGGAGGCGTACAAGCCGGACACCACGATCGATCTCAACAGACACCACGAACC CAAGGTGCTGCTCGACAAGATCGCCTATTGGACCGTCAAATTACTGCGCGTGCCCACCGA CATATTCTTCCAGAGGAGGTACGGCTGCCGTGCTATGATGCTGGAAACAGTGGCGGCGGT GCCGGGGATGGTGGGCGGCATGCTGCTTCACCTGCGCTCGCTCCGCCGCTTCGAGCACAG CGGCGGCTGGATCCGGGCGCTGCTGGAGGAGGCGGAGAATGAACGCATGCACCTCATGAC CTTCATGGAGGTGGCCAAGCCCAAGTGGTACGAGCGCGCGCTTGTCCTCGCCGTGCAGGG CGTCTTCTTCAACGCCTACTTCCTCGGCTACCTCATCTCCCCCAAGTTCGCGCACCGTGT CGTTGGGTACCTCGAGGAGGAGGCCATCCACTCATATACCGAATACCTCAAGGACCTCGA GGCCGGCAAGATCGAGAACGTCCCCGCGCCGGCCATTGCCATCGACTACTGGCAGCTCCC AGCTGATGCGACGCTCAAGGATGTGGTTGTCGTGGTGCGCTCCGACGAGGCGCACCACCG CGACGTCAATCACTTTGCGTCGGACATACATTTCCAGGGTATGCAGCTCAAGGAGACACC TGCACCGATTGAGTACCATTGAACAATCGGGGTCCTGTGACGCTTGAGAGTTCCAGTTCA TTTTGGCTAGCTGTAGGTAGCTAAAGATGCTTGAGAAATAAAAAGAAAATGCCTGGCTGC TATGAGTAGCAAAGATCTCGTGGGTTGATCCTAAAATCTTTTACGTGAGTGTTTGTAAGT AGAGATACAGACATTGATACGTGCACTGAATCTTGTCCAGAACATACCATCGACTTGGTT GGTTCCACAGAGAAAACTTTATATCCGATTGTAACAGAGTTTTTTTTTCCTGAAAAGGAG CAACGAAGGAGCCGCGCGTCGTCGATTATCTATGCCACTTTGTAACCCACCCATTTAGAA CTTGTTCGGTTAGGAGTGAATTGATGAAGATTTCTCTTTCTATTTAATTTTCTCATCCGG TTTGGGTAAAACCGAACATGTCTTT