Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d017721_T009
CDS Infomation

cds chromosome:B73_RefGen_v4:5:205190315:205198427:-1 gene:Zm00001d017721 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tudor/PWWP/MBT superfamily protein
Sequence

ATGGTGGGGAGCTCGGTGGAGGGAGGAGCAGACGGAGATGGGGGCTGCTGCGGCGTCGGG
GACACCTCGCCCGGGACCATCGTGTGGGTGCGGCGGAGGAACGGGTCCTGGTGGCCCGGC
AGGATCCTGGGCCCTGAGGAACTCCCACCGTCGCAGATCATGTCGCCGAGGTCCGGTACG
CCGGTCAAGCTCCTCGGCCGGGAAGACGCAAGCGTGGATTGGTACAACCTTGAGAAATCA
AAACGTGTTAAAGCATTCAGGTGTGGAGAGTTTGATGCCTGTATTGAGAAGGCAGAGGCT
ACGCAAGGGACTCTTGTGAAGAAAAGAGAGAAATATGCACGGAGAGAAGATGCTGTTCTT
CATGCACTTGAATTGGAGAGGAAACAGTTTGCATCGAAGTATCAGATTCAAGGTTTCAGA
CCTGGACCATCTGGTAATATTTCTGCTTGCACAAAACACCGCAAAGACCTTGGAAGTACT
CGATACAAGAGTAAAAAGAGCAAGAATTGCAAAGATGTATCTGTTCCTCCTGACGTAAAA
AAAGAAGTGGGACAATGTTTCCTACATGCTGGTTCAAAGAGAAACTTTTCAGAATCTCTT
ACTCAAGGAAATGTTGTCAGTAATCACATGGGTAATTTCTCTCATTTGAGCCATTCTCAT
GGAGGTGACACTTTAGAGAACAAGGAGAGTACAATTGTGAAGAAAAATAGATCGGATGGA
AGTGATTTTGAAGACTCTCTTGTTTCAAAATCAGATAGACGCAGACCGATTTCTCAAGTA
TTGCAGAGTAGTGAAAACTTGCTTCCTCACTTAAAGCAAAACAATGATTTTGGGGCTTTG
TTAATCAAGGAGAATAATAATCCTTCACTTGCCACCTCCCGGTCCAGAAGAAATAAATAT
ACATACATGGCTAGTGATTCTGGTGAAACTCAGAGTCATAGTGATTTACCTTCTATAAAG
ATGACTGCTACTGGAGCTGATTTTGAGAATGAAAGCTATCTTCGGCATACTGGTTATTTT
TCTGAGGAGCAGACTTCTTCTGACTTCGTTGAGAAGCAAGTAACTGAGTCTTCAGAGAGG
GAATGCTCAGAAAGTGAGACTGAAGAGGATGCTGAACTTCTGCAAAATGCAAGTGTGATT
CTACCTATAGAATCACATGCTCCTGATCCGTATTCTGTTCCAATATATGAGAAGTTCAAG
CATGTGGATTATGGTGACAATGAGGTGGCCTATTCTAATTATATGCCCCAGTTGAATGAA
TCTGAGGAAGAGGATGGTTCTTCTGAGCTGGGTGTCTCTCAGTGGCACATGAAAGGTAAA
CGTAACAATCGTAATGCCACAAAGAGATCAGTGGACATGAGAGATGGAAATACATGGTTA
AAAAACTACAATGGGTCATTAAAAGGGTCTTTGCATAACACAAATGATGGGAATCCCAGA
AAAGAAGGTATGCACACATCTGGTGAAAAGTTTTTTGAGGAAAGCATTTACCAAATTAAA
GAGGAACCCAGTTATGATGATTCTGATGAAACTAATGTATTTGAGGACACGAGCCATTCA
GAGGCTAACTTGTACTATGGTAAAAGATGCACTTCATTCTTGAGAACCACAAGAGATCTT
AGTCGAAGATACAGTTACTTTAATGACTATGAGAATGACTCTTCAAATGTTTCTCCCCTA
AATAAGGACACTGAACAGATGTACCATGTTGATCGGAATGCGTATTGGGATGGACCTTCA
TTTTACCAAACGAAGTTGACTTCACGTTTTGGTGGCATGAGGCCAATGTTGTTCAATGTT
AACCTCAAAGTTCAGGCTAGCTACCAAGGAGAGCATGTCCCTCTTGTCTCTTTAATGAGC
AGACTTAATGGCAAAGCAATTGTTGGACACCCTATCCAAATTGAAATAGTTGAAGATGGT
TCCACAGATCATCTGATATTATGTGGTGACAGTGGTATGCAAGAGAGCTCAGCTGCTCCA
CCTGCTTGGCCAACAGGTAGAAGGACTGCCATGCAAAGAGTTCCCCGTTCAAATCCATCA
GGAGCACTGTTGGATGGCGATAATGAAGGTGGTCTTGTGTATTCTGATTATGAGATGAAA
CCAACCAAGTTGTACACTTCTTCCAATCATCAGGTTAAGGTGAATAAGAAAAGCAGTTCA
AATACTAGGAGGTCAGTAGCTAAGTCCCAAAAGAAGTCATCCAAGAAAACAAACCTCTCA
AGCCAGAAACGTAGAGTTCTCTCTTCCATTTCCACTGCAAAAAAACATCATGGAGAAGGT
GGCCGAGCAAAGGCACATTGGCGTAATGACATATTGGGTGGTTTAATCAGATCAGAAGGA
GTTCCTCTAGTGACATGTGTCCCAACGAAGGTTGTGTTCACTAGGATATTGGAAGCAGTT
GGCAGGCCACCTCTATCTGTCGTTCACCGTGTTAGAATGACTAGTCCTTCAGTGCGAGAT
CCTCCGTAG

Peptide Sequence

PEP ID

Zm00001d017721_P009
PEP Infomation

pep chromosome:B73_RefGen_v4:5:205190315:205198427:-1 gene:Zm00001d017721 transcript:Zm00001d017721_T009 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tudor/PWWP/MBT superfamily protein
Sequence

MVGSSVEGGADGDGGCCGVGDTSPGTIVWVRRRNGSWWPGRILGPEELPPSQIMSPRSGT
PVKLLGREDASVDWYNLEKSKRVKAFRCGEFDACIEKAEATQGTLVKKREKYARREDAVL
HALELERKQFASKYQIQGFRPGPSGNISACTKHRKDLGSTRYKSKKSKNCKDVSVPPDVK
KEVGQCFLHAGSKRNFSESLTQGNVVSNHMGNFSHLSHSHGGDTLENKESTIVKKNRSDG
SDFEDSLVSKSDRRRPISQVLQSSENLLPHLKQNNDFGALLIKENNNPSLATSRSRRNKY
TYMASDSGETQSHSDLPSIKMTATGADFENESYLRHTGYFSEEQTSSDFVEKQVTESSER
ECSESETEEDAELLQNASVILPIESHAPDPYSVPIYEKFKHVDYGDNEVAYSNYMPQLNE
SEEEDGSSELGVSQWHMKGKRNNRNATKRSVDMRDGNTWLKNYNGSLKGSLHNTNDGNPR
KEGMHTSGEKFFEESIYQIKEEPSYDDSDETNVFEDTSHSEANLYYGKRCTSFLRTTRDL
SRRYSYFNDYENDSSNVSPLNKDTEQMYHVDRNAYWDGPSFYQTKLTSRFGGMRPMLFNV
NLKVQASYQGEHVPLVSLMSRLNGKAIVGHPIQIEIVEDGSTDHLILCGDSGMQESSAAP
PAWPTGRRTAMQRVPRSNPSGALLDGDNEGGLVYSDYEMKPTKLYTSSNHQVKVNKKSSS
NTRRSVAKSQKKSSKKTNLSSQKRRVLSSISTAKKHHGEGGRAKAHWRNDILGGLIRSEG
VPLVTCVPTKVVFTRILEAVGRPPLSVVHRVRMTSPSVRDPP

Transcript Sequence

Transcript ID

Zm00001d017721_T009
Transcript Infomation

cdna chromosome:B73_RefGen_v4:5:205190315:205198427:-1 gene:Zm00001d017721 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tudor/PWWP/MBT superfamily protein
Sequence

CCTTCGGTTACCTTCCTTTTCCTTCCGGCATCACGCGGATCGGACCACCGGAAACCAGGA
ACCAAACTACCCCAAAGAAAAGAAAACCTTTTTATTTCACCTTTTTCCTCAAAAAAGAGA
GGGAAATCATATTCCAGGGCCGCCCGCGCCGGAACCGACCACTTCGCCGGCAGCGAGCCG
GAGACTACGCGGAGCCCCTATCCCCGCGCCGGCGTGGGCGGAGGGAGGAGAAGGAGCAGC
AGCAGCAGCAGAAGGATAAAGGGGGGCTTTGGGAGCCTCTGAGAAGAAGATTCTAGAAGC
TACCTGAGGCGAGGCGAGCGCGCCGCGGCACGAGTGATCTCGGTGGAATAAGTCGCGCGG
GGCCGGCGCCGTGGGGGATGCGCCTCTGGATGCCGACACGCTCCGGGATTTGAATGGTAG
CCAGATCTCGAGGGGGAGGGGAGCTTCTCGAAGCGGGGTAAGGCGCGCGGTCTGGTTGGC
CGGCGGTTAGGGTTTGGCGGGAGCGGGATGGTGGGGAGCTCGGTGGAGGGAGGAGCAGAC
GGAGATGGGGGCTGCTGCGGCGTCGGGGACACCTCGCCCGGGACCATCGTGTGGGTGCGG
CGGAGGAACGGGTCCTGGTGGCCCGGCAGGATCCTGGGCCCTGAGGAACTCCCACCGTCG
CAGATCATGTCGCCGAGGTCCGGTACGCCGGTCAAGCTCCTCGGCCGGGAAGACGCAAGC
GTGGATTGGTACAACCTTGAGAAATCAAAACGTGTTAAAGCATTCAGGTGTGGAGAGTTT
GATGCCTGTATTGAGAAGGCAGAGGCTACGCAAGGGACTCTTGTGAAGAAAAGAGAGAAA
TATGCACGGAGAGAAGATGCTGTTCTTCATGCACTTGAATTGGAGAGGAAACAGTTTGCA
TCGAAGTATCAGATTCAAGGTTTCAGACCTGGACCATCTGGTAATATTTCTGCTTGCACA
AAACACCGCAAAGACCTTGGAAGTACTCGATACAAGAGTAAAAAGAGCAAGAATTGCAAA
GATGTATCTGTTCCTCCTGACGTAAAAAAAGAAGTGGGACAATGTTTCCTACATGCTGGT
TCAAAGAGAAACTTTTCAGAATCTCTTACTCAAGGAAATGTTGTCAGTAATCACATGGGT
AATTTCTCTCATTTGAGCCATTCTCATGGAGGTGACACTTTAGAGAACAAGGAGAGTACA
ATTGTGAAGAAAAATAGATCGGATGGAAGTGATTTTGAAGACTCTCTTGTTTCAAAATCA
GATAGACGCAGACCGATTTCTCAAGTATTGCAGAGTAGTGAAAACTTGCTTCCTCACTTA
AAGCAAAACAATGATTTTGGGGCTTTGTTAATCAAGGAGAATAATAATCCTTCACTTGCC
ACCTCCCGGTCCAGAAGAAATAAATATACATACATGGCTAGTGATTCTGGTGAAACTCAG
AGTCATAGTGATTTACCTTCTATAAAGATGACTGCTACTGGAGCTGATTTTGAGAATGAA
AGCTATCTTCGGCATACTGGTTATTTTTCTGAGGAGCAGACTTCTTCTGACTTCGTTGAG
AAGCAAGTAACTGAGTCTTCAGAGAGGGAATGCTCAGAAAGTGAGACTGAAGAGGATGCT
GAACTTCTGCAAAATGCAAGTGTGATTCTACCTATAGAATCACATGCTCCTGATCCGTAT
TCTGTTCCAATATATGAGAAGTTCAAGCATGTGGATTATGGTGACAATGAGGTGGCCTAT
TCTAATTATATGCCCCAGTTGAATGAATCTGAGGAAGAGGATGGTTCTTCTGAGCTGGGT
GTCTCTCAGTGGCACATGAAAGGTAAACGTAACAATCGTAATGCCACAAAGAGATCAGTG
GACATGAGAGATGGAAATACATGGTTAAAAAACTACAATGGGTCATTAAAAGGGTCTTTG
CATAACACAAATGATGGGAATCCCAGAAAAGAAGGTATGCACACATCTGGTGAAAAGTTT
TTTGAGGAAAGCATTTACCAAATTAAAGAGGAACCCAGTTATGATGATTCTGATGAAACT
AATGTATTTGAGGACACGAGCCATTCAGAGGCTAACTTGTACTATGGTAAAAGATGCACT
TCATTCTTGAGAACCACAAGAGATCTTAGTCGAAGATACAGTTACTTTAATGACTATGAG
AATGACTCTTCAAATGTTTCTCCCCTAAATAAGGACACTGAACAGATGTACCATGTTGAT
CGGAATGCGTATTGGGATGGACCTTCATTTTACCAAACGAAGTTGACTTCACGTTTTGGT
GGCATGAGGCCAATGTTGTTCAATGTTAACCTCAAAGTTCAGGCTAGCTACCAAGGAGAG
CATGTCCCTCTTGTCTCTTTAATGAGCAGACTTAATGGCAAAGCAATTGTTGGACACCCT
ATCCAAATTGAAATAGTTGAAGATGGTTCCACAGATCATCTGATATTATGTGGTGACAGT
GGTATGCAAGAGAGCTCAGCTGCTCCACCTGCTTGGCCAACAGGTAGAAGGACTGCCATG
CAAAGAGTTCCCCGTTCAAATCCATCAGGAGCACTGTTGGATGGCGATAATGAAGGTGGT
CTTGTGTATTCTGATTATGAGATGAAACCAACCAAGTTGTACACTTCTTCCAATCATCAG
GTTAAGGTGAATAAGAAAAGCAGTTCAAATACTAGGAGGTCAGTAGCTAAGTCCCAAAAG
AAGTCATCCAAGAAAACAAACCTCTCAAGCCAGAAACGTAGAGTTCTCTCTTCCATTTCC
ACTGCAAAAAAACATCATGGAGAAGGTGGCCGAGCAAAGGCACATTGGCGTAATGACATA
TTGGGTGGTTTAATCAGATCAGAAGGAGTTCCTCTAGTGACATGTGTCCCAACGAAGGTT
GTGTTCACTAGGATATTGGAAGCAGTTGGCAGGCCACCTCTATCTGTCGTTCACCGTGTT
AGAATGACTAGTCCTTCAGTGCGAGATCCTCCGTAGGCTTCAACTGTAGTGCTATATATG
GTTATATGTTGCCAGCCATTGACATGCAAGTTTGATGTACATTCTGTTAATTGAAGAGGC
AGACCATTCAATCATCCGGTAGCACCTGTGAAGAGTCAGATTGATATGGTTGCTCTAAAA
TAACTTGGAACAGCTGAGCTCTTATTAGCAGTGGTAACCTGTAAAAATCAATAACGCTTG
TGTATTTCTGACTGGAGACTGATCATGAATGCTTCAGAGCAGCTTGTGTATTTCTGACTG
GAGACAGATCATGAATGATTCAGAGCAGCTGAGCCGTTGATACCATGAAGGGGTACTCTT
TGATGTAGCTAGGAGTCTAGGACTGTCACAACTGTTTACTGTAAAGTACTAACTTAAGCA
TTTTAGGTGTCAATTTAGTTAAAACATTTGTGTCATCATATATAGCAATAGGTCATAGGT
TTTCTAATGACATGTATAATCCCCCAATTATATCCTGATGTATCTGTTATTTGTTGTCGA
GATGTAGTTGATTCAGCTGTATGTTTAGAAGCATGTGTATCTAGTCGATGTAATA