Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d017709_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:5:204804640:204808560:1 gene:Zm00001d017709 gene_biotype:protein_coding transcript_biotype:protein_coding description:Secretory carrier-associated membrane protein 4
Sequence

ATGCACCACGATCCCAACCCCTTCGACGAGGGCGCCGACGAGAACCCCTTCTCGAATGGA
GGCGGAGGAGCGCGTGGCGGAGGCGTCAAGCCGCAGTACGGGTTCCGGCCGACGGAGCCC
GCGGGGTTCGGCGGCGGCAGGGGCGATGCGACCACCGACATCCCTCTGGACACCATGAAC
GATTCGAAGGGCAAGGCGAAGGAGCTGTCTCAGTGGGAGTCAGATCTCAGGAGGAGGGAG
TCGGATATCAGGAGGAGGGAGGAAGCTCTCAAGAGCGCTGGGGTGCCCATGGAGGACAAG
AACTGGCCGCCTTTCTTCCCAATCATCCACCATGATATTGCCAATGAGATACCAGCAAAC
GCTCAGAAGTTGCAGTATCTTGCGTTTGCGAGCTGGCTTGGTATTGTGCTTTGCCTCTTT
TGGAATTTTATTGCTGTCATAGTCTGTTGGATCAGAGGGGGAGATTCTAAACTATTTTTC
CTGGCTACCATCTATGGTATGCTTGGCATCCCTTTGTCCTACTTGATGTGGTATAGACCT
CTGTACCGAGCAATGAGAACTGACAGTGCTTTCAGCTTTGGATGGTTTTTCCTTTGTTAC
CTGCTCCATATTGGTTTTTGCATATTTGCTGCCATTGCTCCTGCAGTTGTATTCCGTGGA
AAATCATTAACATTCACAAGGTTTTTGGTTTGTTCATCTTGCTCTAAGAGAGATACTTTG
TTTGTCATCAGGGGTATACTGGCAGCGATCGACACCTTTTCTGATCATGCAATAGTTGGG
ATCTTTTACTTTGTCGGATTTGCCTTGTTTTGCTTGGAGACACTTGTGAGCATATGGGTT
CTTCAGAAAGTATACATGTACTTCAGAGGGCACAAGTAG

Peptide Sequence

PEP ID

Zm00001d017709_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:5:204804640:204808560:1 gene:Zm00001d017709 transcript:Zm00001d017709_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Secretory carrier-associated membrane protein 4
Sequence

MHHDPNPFDEGADENPFSNGGGGARGGGVKPQYGFRPTEPAGFGGGRGDATTDIPLDTMN
DSKGKAKELSQWESDLRRRESDIRRREEALKSAGVPMEDKNWPPFFPIIHHDIANEIPAN
AQKLQYLAFASWLGIVLCLFWNFIAVIVCWIRGGDSKLFFLATIYGMLGIPLSYLMWYRP
LYRAMRTDSAFSFGWFFLCYLLHIGFCIFAAIAPAVVFRGKSLTFTRFLVCSSCSKRDTL
FVIRGILAAIDTFSDHAIVGIFYFVGFALFCLETLVSIWVLQKVYMYFRGHK

Transcript Sequence

Transcript ID

Zm00001d017709_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:5:204804640:204808560:1 gene:Zm00001d017709 gene_biotype:protein_coding transcript_biotype:protein_coding description:Secretory carrier-associated membrane protein 4
Sequence

CTCTTCAGTCTCCTCGCGCCAACGACCACATCCCACCGAACACCGATCAAGGTAAACCTG
TTCGCTGCTCCGCCAGAAGCCGAGGTCGAGCTGTTCACGGCAGCGAGCATGCACCACGAT
CCCAACCCCTTCGACGAGGGCGCCGACGAGAACCCCTTCTCGAATGGAGGCGGAGGAGCG
CGTGGCGGAGGCGTCAAGCCGCAGTACGGGTTCCGGCCGACGGAGCCCGCGGGGTTCGGC
GGCGGCAGGGGCGATGCGACCACCGACATCCCTCTGGACACCATGAACGATTCGAAGGGC
AAGGCGAAGGAGCTGTCTCAGTGGGAGTCAGATCTCAGGAGGAGGGAGTCGGATATCAGG
AGGAGGGAGGAAGCTCTCAAGAGCGCTGGGGTGCCCATGGAGGACAAGAACTGGCCGCCT
TTCTTCCCAATCATCCACCATGATATTGCCAATGAGATACCAGCAAACGCTCAGAAGTTG
CAGTATCTTGCGTTTGCGAGCTGGCTTGGTATTGTGCTTTGCCTCTTTTGGAATTTTATT
GCTGTCATAGTCTGTTGGATCAGAGGGGGAGATTCTAAACTATTTTTCCTGGCTACCATC
TATGGTATGCTTGGCATCCCTTTGTCCTACTTGATGTGGTATAGACCTCTGTACCGAGCA
ATGAGAACTGACAGTGCTTTCAGCTTTGGATGGTTTTTCCTTTGTTACCTGCTCCATATT
GGTTTTTGCATATTTGCTGCCATTGCTCCTGCAGTTGTATTCCGTGGAAAATCATTAACA
TTCACAAGGTTTTTGGTTTGTTCATCTTGCTCTAAGAGAGATACTTTGTTTGTCATCAGG
GGTATACTGGCAGCGATCGACACCTTTTCTGATCATGCAATAGTTGGGATCTTTTACTTT
GTCGGATTTGCCTTGTTTTGCTTGGAGACACTTGTGAGCATATGGGTTCTTCAGAAAGTA
TACATGTACTTCAGAGGGCACAAGTAGGCTATGGAAGCACTTGCAATAGTCAACCAACTA
CCATCTCATCTGATTGCCATGTGGTTTTGTATGTTAGGACAACGTATATTTTTCCGTTTG
CATTGTGGAGGGTAAGTACGACTATATGTATAATTTTCGGTTTGCATGGTGGAGGGTAAA
TACGACTATATTGTAGCGTCTCTCTCGACTGATCTGTTTTTAACCCCAATTCTTTGCTCA
TATACAAATTGTGCTTTGTATGCACTTTTGTTTGCTACCAAGGCTGCACATTGTATGCAC
TTCTGTTGGTGCCTTAAACAAGGAGACAAATA