Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d017675_T005
CDS Infomation

cds chromosome:B73_RefGen_v4:5:203826948:203833201:1 gene:Zm00001d017675 gene_biotype:protein_coding transcript_biotype:protein_coding description:AP-2 complex subunit mu

Sequence

ATGCCGGTGGCAGCGTCGGCCATCTACTTCCTCAACCTTCGCGGGGACGTCCTCATCAAC
CGCCTCTACCGTGATGATGTTGGGGGAAATATGGTTGATGCGTTCAGAATGCATATCATG
CAAACAAAAGAACTTGGCACATGCCCTGTTCGTCAAATAGGAGGCTGCTCCTTCCTTTAT
ATGAGGATCAGTAATGTTTACATTGTGATCGTAGTTAGCAGCAATGCTAATGTTGCATGT
GCTTTCAAATTTGTTGTCGAGGCGGTGGCTCTCTTCAAGTCCTACTTCGGTGGAGCTTTT
GATGAAGACGCTATCAGGAATAACTTTGTTTTGATATATGAACTTCTTGATGAGATCATG
GATTTTGGTTATCCTCAAAACCTGTCACCTGAAATTTTGAAGTTGTATATAACTCAAGAA
GGTGTTCGGTCACCATTTTCCTCAAAGCCCTCAGAGAAGCCTGTTCCAAATGCGACTCTT
CAAGTCACTGGCGCTGTTGGTTGGAGAAGAGAGGGACTTGTGTACAAGAAGAATGAGGTT
TTCTTGGACATAGTTGAGAGTGTAAACCTTCTTATGTCTTCGAAAGGGAGTGTTCTAAGA
TGTGATGTGACGGGAAAGATTCTTATGAAATGCTTCCTTTCTGGAATGCCTGATCTGAAG
CTGGGATTAAATGACAAGATTGGACTTGAAAAAGAGGCCCAACTAAAGTCCAGACCAGCA
AAGAGGTAA

Peptide Sequence

PEP ID

Zm00001d017675_P005
PEP Infomation

pep chromosome:B73_RefGen_v4:5:203826948:203833201:1 gene:Zm00001d017675 transcript:Zm00001d017675_T005 gene_biotype:protein_coding transcript_biotype:protein_coding description:AP-2 complex subunit mu

Sequence

MPVAASAIYFLNLRGDVLINRLYRDDVGGNMVDAFRMHIMQTKELGTCPVRQIGGCSFLY
MRISNVYIVIVVSSNANVACAFKFVVEAVALFKSYFGGAFDEDAIRNNFVLIYELLDEIM
DFGYPQNLSPEILKLYITQEGVRSPFSSKPSEKPVPNATLQVTGAVGWRREGLVYKKNEV
FLDIVESVNLLMSSKGSVLRCDVTGKILMKCFLSGMPDLKLGLNDKIGLEKEAQLKSRPA
KR

Transcript Sequence

Transcript ID

Zm00001d017675_T005
Transcript Infomation

cdna chromosome:B73_RefGen_v4:5:203826948:203833201:1 gene:Zm00001d017675 gene_biotype:protein_coding transcript_biotype:protein_coding description:AP-2 complex subunit mu

Sequence

TGCTGCCGCCAGATCTAACCAAACCCCGCGCCCTCCTCACCGTCCGGCGAGCTACGGACT
CAGCAGATCACCGTCGCTCGAGTTGTACCTGAAGGCGCGCCCGTGGAACCGGCCGCGAGA
TAAGGGCGGCGGGAAGGCGGGCGACGATGCCGGTGGCAGCGTCGGCCATCTACTTCCTCA
ACCTTCGCGGGGACGTCCTCATCAACCGCCTCTACCGTGATGATGTTGGGGGAAATATGG
TTGATGCGTTCAGAATGCATATCATGCAAACAAAAGAACTTGGCACATGCCCTGTTCGTC
AAATAGGAGGCTGCTCCTTCCTTTATATGAGGATCAGTAATGTTTACATTGTGATCGTAG
TTAGCAGCAATGCTAATGTTGCATGTGCTTTCAAATTTGTTGTCGAGGCGGTGGCTCTCT
TCAAGTCCTACTTCGGTGGAGCTTTTGATGAAGACGCTATCAGGAATAACTTTGTTTTGA
TATATGAACTTCTTGATGAGATCATGGATTTTGGTTATCCTCAAAACCTGTCACCTGAAA
TTTTGAAGTTGTATATAACTCAAGAAGGTGTTCGGTCACCATTTTCCTCAAAGCCCTCAG
AGAAGCCTGTTCCAAATGCGACTCTTCAAGTCACTGGCGCTGTTGGTTGGAGAAGAGAGG
GACTTGTGTACAAGAAGAATGAGGTTTTCTTGGACATAGTTGAGAGTGTAAACCTTCTTA
TGTCTTCGAAAGGGAGTGTTCTAAGATGTGATGTGACGGGAAAGATTCTTATGAAATGCT
TCCTTTCTGGAATGCCTGATCTGAAGCTGGGATTAAATGACAAGATTGGACTTGAAAAAG
AGGCCCAACTAAAGTCCAGACCAGCAAAGAGGTAACCATATCTTGATTATTATAAAAGGT
GAATTTTGCCATAGGACATGGACATCAAACATACATGTTACATGGTATGGGCCATTTTCA
CGCTCAAGCTCTGAAATATGCCAGGTACCATTATGAAAGTGTTGCTGCAGCACACGTCAA
TTATGATAATATTCATTTATGCAATTTTATTAGAGAGAAGGGGTGCATTGACTTTTTTGC
CCTTGCCTTATCTTCATCCTCCTGGTGATGTAGAGTCGTGGTGACACATCCCTCTCTCAA
TCATCTCTCGTCTATTCGAAGCACAGATGCGTCTTGCCTCACAGCAGCAGAGCAAGACCT
GTCGTGCCATTGCTCTCTTACTCCATCAACACCTATGGTAACACCTGCCAAGCCTGCGTA
CGCACTGCTCTCCAGGTTCCCTGTGTCCATCATAGTGCTCTCCTTCACCACCATCACTGT
TATCGGTACAATTGCACCACAGTCGTCTGGCTCGAGCTCGACAGTGCTGAGCTCCTCCGC
TCCACCCCCACCCCAATGTCATCTGATGGACCTCCCGCAAGGAGGTCACATGCTATTCTA
CGCTGCTTCGGTCCCTGCCCGATAGCGTGCTTTCTGTCATGCTCAAGAACCTCGTCCACA
ACCTATGCACTACGTCAGTGTGCCCCTTGAGTTCCATGGCCCCCTGCTAACCCTGCCGAC
GCACGATCTTCTACTACTGGCTCCATGGACCCAGATCAGGCGACACCAAAACAGCCGGAG
TGGTACAATCTCGGAGGGCATGAGCAACAGCAGTGGCTTTTAATTCTGCATCCAGAACTC
GTTGGATTCCCAGTCCAAGCTTGTGAGCATTCCGCTAAACACCTATCAGGTAGTCCTGGA
AGTCTGTGTCCCCACACTAAAAAATGATGAGTTATGGTATTCCAACCCGCCAGGCCTCTA
CGTCCATTAGAACAACCTCATCACTGGGCGAGTGAACATCGTGTACTGCAAGGCCGTGGC
AGCACTGGGCGCACTCGACCTTCCGACCTACGACATTGAGCTGACCCCGTCCTTGTGCTC
TTGCTCGGCGGCAAGAAGGTGGAGGTTTTGGGTGAATGAGAGGGGGATGTCCACACCGCC
AGCCAAAGATGAAGGCAAGGGCAAAAATGGGAAGACTATAGAACTTGATGATGTCACATT
CCACCAGTGTGTCAACTTAACAAGATTTAACTCAGAAAAGACAGTCAGTTTCGTGCCACC
TGACGGTGAATTTGAGTTGATGAAGTATCGAATCACAGAGGGTGTAAACCTTCCATTCCG
TGTTCTGCCGACAATCAAGGAATTGGGCCGAACACGCATGGAGATCAACGTGAAAGTCAA
GAGTGTTTTCGGTGCTAAGATGTTTGCACTTGGTGTCGTTGTTAAGGTTCCAGTTCCGAA
GCAGACAGCTAAGACTAGTTTCCAAACAACATCAGGCAAAGCAAAATACAATGCTTCGAT
TGATTCACTGGTGTGGAAGATCAGGAAATTCCCTGGGCAGACTGAGGCAACTATGAGCGC
AGAGGTGGAGTTGATTTCTACTATGGGTGAAAAGAAGTCATGGAACAGACCACCTATCCA
GATGGAATTCCAGGTTCCAATGTTCACTGCTTCTGGTTTACGTGTTCGCTTCCTTAAGGT
TTGGGAGAAGAGTGGTTATAACACTGTTGAGTGGGTTCGCTACATCACAAGGGCTGGATC
ATATGAGATAAGGTGTTAGCAACAAATCCATACAAGATCAAGATATTATTGACAAATGAT
ATTCATTGGTCTCCATTGAGCAGCTATCCACAGAGATCAATCTGTGGCATCATGCATGAT
CATAAAGCGCATATATTGTGACACAAGTATCTGAAACTTTGTACTTCAACAGAGGGTGGG
GCAGGGCAGATCAGACAATTTTCTGTGTTTCTTATTTCCATTGTAGTCTGGGATCTCTGT
TCTTCCCTCCATGCCCTGTTTGTAGTAGGGATTATTTTTTGCTCGTATATTTGGCTGTAG
CTTTCCTTGTTTGTTGATCAATACACCTGTTCAGTTTGT