Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d017660_T076
CDS Infomation	cds chromosome:B73_RefGen_v4:5:203332004:203348004:-1 gene:Zm00001d017660 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1
Sequence	ATGGCGTCAAAAGGTCCCCGGTCAAGGCTAGACCATGACACAAGAGCTAGGCGTCAGAAG GCTCTTGAAGCTCCAAGGGAGCCTCGACGGCCAAAAGTTCACTGGGACCATGTCCTTGCT GAGATGTTGTGGCTGGCAAAGGAGTTTGATTCTGAGAGAAAATGGAAGTTGTCCATGGCC AAAAAGATTGCTCAAAGAGCAAATAAGAGCATAGTTGATCAAGCAGCAAAGGGCGAGAGA AAACAGAAGGAGGAAGAACATAGAATGCGAAAAGTTGCCGTTAATATTTCAAAGGATGTG AAGAAGTTCTGGATCAAAATAGAAAAGCTGGTTGTCTATAAGCATCAACTGGAGCTTGAG GAGAGAAAGAAGAAGGCACTTGATAAGCAACTTGATTTCCTTTTAGGTCAGACTGAAAGG TATTCAACAATGTTGGCGGAAAACCTTGTAGATATGCCCTATTCTCAAAACCTAGAAACC GAGACTTCGCAGATAAACCAACCATCCCATCAAGAGGTAGTAGCAGAAGAGAACTTAAAC GCAACCATTCCGGATGATCTTGATAATATGGAAGTCGATGATGATTATGGGAGCTCCTTG GATGAAGAGCCAGAAGATGATGAGCACACTATCGATGAGGATGAAGCTCAGATTACCGAA GCTGAGCGCAATGAAGAACTAGCTGCTTTAGAGGCAGAAGCTGACCTACCACTGGATGTT ATTCTCAAGATGTATACAAAAACCAAAGTTACTCCGAACCAGGCTAATGGGTGTGATCAT GAACTTGCTCACTCTTCAAGTGACGAAGGCAATTCTTCTGAGGAAGTGGATGATGGTCAT TCTTATGCTGAGTTTGTGAAGAAGAATCATGGTAAAAGTAATGGAAATATTTCTTCTATC AATGATCAGGAGGACGAAGATTACATTGCTGCTGAAGAAGTAAAGGATGACGAAGCAACT TTGTCCGAAGAGGAACAATTGGCAAAGAAAGAAGATCCTGATCATCTGGAAGAGATTAAG TTACTGCAGAAGGAGAGCGAGATACCACTAGAAGAACTTCTTGCGAGGTACCGAGAGGAT GGCTGTGCAGATCATGAAACAGCTGAGTTGGAGAATTCACCCCATTTTGTTGAAGAGGTC AATACCGACAAGTCTTTGAATGATCAATCTGTGAACATTTTGGAAGCGAAAAGTGATATT TTTGTGGATCACCAATCCAGGGATGTGCTGGAAACTGAGCACACGACTCTACAATCAGAA ATTGCATCAGAGCCTTGTGCTCAACAAAATTTTGTGGAAGAGAATAATCTCACTGATGTT AAGACAGTCAATGAAGATAAGAGTGATGATGTAATTGCTGATGCTGCAGCTGCTGCAAGA TCAGCACAACCAACTGGCAACACCTTCTTGACTACAAAAGTGCGCACAAAATTCCCATTC CTTCTTAAGCATTCTCTTCGTGAATACCAGCATATAGGGCTGGATTGGTTAGTTGCTATG TATGAGAAGAGGCTTAATGGAATTCTAGCAGATGAAATGGGTTTAGGCAAGACAATCATG ACTATCTCCTTGCTTGCGCACCTTGCGTGTGAGAAGGGGATATGGGGTCCTCATCTTATT GTCGTGCCGACTAGTGTTATGCTAAATTGGGAGACTGAATTTCTTAAGTGGTGTCCTGCT TTTAAAATACTGACTTATTTCGGAAGTGCAAAGGAAAGAAAGCAGAAGCGTCAGGGCTGG ATGAAACCAAATTACTTCCATGTTTGCATCACAACATATAGGCTTGTCATTCAGGATTCT AAAGTGTTTAAGCGAAAAAAGTGGAAGTATCTTATTCTTGATGAGGCTCATCTGATAAAG AACTGGAAATCACAGCGTTGGCAGACATTGCTCAACTTCAATTCAAAGAGACGTATTCTT CTGACTGGAACTCCACTGCAAAATGACCTTATGGAACTTTGGTCCCTCATGCATTTTTTG ATGCCTCATGTATTTCAGTCTCATCAAGAGTTCAAGGATTGGTTCTGCAATCCAATTTCC GGGATGGTGGAAGGTCAAGATAAAGTAAACAAAGAAGTTATAGATCGATTGCACAATGTC CTTCGGCCATTTATACTGCGTCGACTGAAAAGAGATGTTGAGAAACAGTTACCAAAGAAG CATGAGCATGTCATATATTGCCGACTTTCTAGAAGGCAAAGGAACTTGTATGAAGAATTT GTCGCTAGCTCAGAGACACAAGCAACCCTGGCGAGTGGGAATTATTTTGGCATGATAAGC ATCATCATGCAACTTAGAAAGGTCTGTAACCATCCAGATCTTTTTGAAGGTCGGCCAATA ATAAGCTCATTTGACATGGCTGGTATTAACATGCAGCTCAGCTATTCAGTCTGCATGCTC CTTGATAAGAGTCCATTTTCTCAGGTGGACCTGTCTGATATGAATTTTGTGTTTACTCAA AATGAATTTAGCATGAGTTCCTGGGAAGCTGACGAGGTCATCTCCGCCTTTCCTTCAAGT ATCACCTCCAGGGACTGTGACCTGGATATTTTTTGCTCTAATAAGGATCATCAGGGAAGT AATTTGACAAACATTTTTGAAGATATTCAGAAAGCCCTACAGGAGGAGAGAATAAAGGAA TCCAGAGAAAGGGCAGCTTCTGTTGCATGGTGGAATAGAGTTAGATGCCAAAAGAGACCT GTCTATGGCACAAACATGAGACATGTTTTGACTGTAAAGCATCCTGTATCAAATATTCTT AATAAGAGGAACAATCCATTGTGC

Peptide Sequence

PEP ID	Zm00001d017660_P076
PEP Infomation	pep chromosome:B73_RefGen_v4:5:203332004:203348004:-1 gene:Zm00001d017660 transcript:Zm00001d017660_T076 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1
Sequence	MASKGPRSRLDHDTRARRQKALEAPREPRRPKVHWDHVLAEMLWLAKEFDSERKWKLSMA KKIAQRANKSIVDQAAKGERKQKEEEHRMRKVAVNISKDVKKFWIKIEKLVVYKHQLELE ERKKKALDKQLDFLLGQTERYSTMLAENLVDMPYSQNLETETSQINQPSHQEVVAEENLN ATIPDDLDNMEVDDDYGSSLDEEPEDDEHTIDEDEAQITEAERNEELAALEAEADLPLDV ILKMYTKTKVTPNQANGCDHELAHSSSDEGNSSEEVDDGHSYAEFVKKNHGKSNGNISSI NDQEDEDYIAAEEVKDDEATLSEEEQLAKKEDPDHLEEIKLLQKESEIPLEELLARYRED GCADHETAELENSPHFVEEVNTDKSLNDQSVNILEAKSDIFVDHQSRDVLETEHTTLQSE IASEPCAQQNFVEENNLTDVKTVNEDKSDDVIADAAAAARSAQPTGNTFLTTKVRTKFPF LLKHSLREYQHIGLDWLVAMYEKRLNGILADEMGLGKTIMTISLLAHLACEKGIWGPHLI VVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKQKRQGWMKPNYFHVCITTYRLVIQDS KVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFL MPHVFQSHQEFKDWFCNPISGMVEGQDKVNKEVIDRLHNVLRPFILRRLKRDVEKQLPKK HEHVIYCRLSRRQRNLYEEFVASSETQATLASGNYFGMISIIMQLRKVCNHPDLFEGRPI ISSFDMAGINMQLSYSVCMLLDKSPFSQVDLSDMNFVFTQNEFSMSSWEADEVISAFPSS ITSRDCDLDIFCSNKDHQGSNLTNIFEDIQKALQEERIKESRERAASVAWWNRVRCQKRP VYGTNMRHVLTVKHPVSNILNKRNNPLC

Transcript Sequence

Transcript ID	Zm00001d017660_T076
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:203332004:203348004:-1 gene:Zm00001d017660 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1
Sequence	GACGCCCGTCCGCCCGTCGCGTTGCTTCGATGCCCCCCCTCGCAGTCGCGACTCGCCTCC TCCGCGCCGTTCCCCATTCATCCTAAAGGCCTAAACCCTAGCCTCCTTGCTCCTGCGCTC CGGTCGCCGGTGCGTCCCCTCCTCCGCTGGCCGCCGGCGCCGGTGCAATCACCCGCCGCC GCCAGTGCATCCGTCCAGGGCTGCACGGCCACCTGTGCCCACTGGGTTGTGCGGTCCTAA CGCAAGTTCGGCGCCGACCACCGCCGAACTGAAGCCGTCTGCCCACACCCACTCGCGGCA GCACCGCCGGACGGCTCCCGGCACTGCGCCAGTGCGTGCTGCCTCCGGTATAGCGGCTGC CGGATCCCGCCGCGGCACCTGCAGGCACTAATCACTAACAGTTACTGCACTGTTGGTATG CGAGTCCTAGTTTGCTGCTCATGCTCTAAGATATGAGGTAGTTCTGTGTGAGGGATTTGA AAGATGGCGTCAAAAGGTCCCCGGTCAAGGCTAGACCATGACACAAGAGCTAGGCGTCAG AAGGCTCTTGAAGCTCCAAGGGAGCCTCGACGGCCAAAAGTTCACTGGGACCATGTCCTT GCTGAGATGTTGTGGCTGGCAAAGGAGTTTGATTCTGAGAGAAAATGGAAGTTGTCCATG GCCAAAAAGATTGCTCAAAGAGCAAATAAGAGCATAGTTGATCAAGCAGCAAAGGGCGAG AGAAAACAGAAGGAGGAAGAACATAGAATGCGAAAAGTTGCCGTTAATATTTCAAAGGAT GTGAAGAAGTTCTGGATCAAAATAGAAAAGCTGGTTGTCTATAAGCATCAACTGGAGCTT GAGGAGAGAAAGAAGAAGGCACTTGATAAGCAACTTGATTTCCTTTTAGGTCAGACTGAA AGGTATTCAACAATGTTGGCGGAAAACCTTGTAGATATGCCCTATTCTCAAAACCTAGAA ACCGAGACTTCGCAGATAAACCAACCATCCCATCAAGAGGTAGTAGCAGAAGAGAACTTA AACGCAACCATTCCGGATGATCTTGATAATATGGAAGTCGATGATGATTATGGGAGCTCC TTGGATGAAGAGCCAGAAGATGATGAGCACACTATCGATGAGGATGAAGCTCAGATTACC GAAGCTGAGCGCAATGAAGAACTAGCTGCTTTAGAGGCAGAAGCTGACCTACCACTGGAT GTTATTCTCAAGATGTATACAAAAACCAAAGTTACTCCGAACCAGGCTAATGGGTGTGAT CATGAACTTGCTCACTCTTCAAGTGACGAAGGCAATTCTTCTGAGGAAGTGGATGATGGT CATTCTTATGCTGAGTTTGTGAAGAAGAATCATGGTAAAAGTAATGGAAATATTTCTTCT ATCAATGATCAGGAGGACGAAGATTACATTGCTGCTGAAGAAGTAAAGGATGACGAAGCA ACTTTGTCCGAAGAGGAACAATTGGCAAAGAAAGAAGATCCTGATCATCTGGAAGAGATT AAGTTACTGCAGAAGGAGAGCGAGATACCACTAGAAGAACTTCTTGCGAGGTACCGAGAG GATGGCTGTGCAGATCATGAAACAGCTGAGTTGGAGAATTCACCCCATTTTGTTGAAGAG GTCAATACCGACAAGTCTTTGAATGATCAATCTGTGAACATTTTGGAAGCGAAAAGTGAT ATTTTTGTGGATCACCAATCCAGGGATGTGCTGGAAACTGAGCACACGACTCTACAATCA GAAATTGCATCAGAGCCTTGTGCTCAACAAAATTTTGTGGAAGAGAATAATCTCACTGAT GTTAAGACAGTCAATGAAGATAAGAGTGATGATGTAATTGCTGATGCTGCAGCTGCTGCA AGATCAGCACAACCAACTGGCAACACCTTCTTGACTACAAAAGTGCGCACAAAATTCCCA TTCCTTCTTAAGCATTCTCTTCGTGAATACCAGCATATAGGGCTGGATTGGTTAGTTGCT ATGTATGAGAAGAGGCTTAATGGAATTCTAGCAGATGAAATGGGTTTAGGCAAGACAATC ATGACTATCTCCTTGCTTGCGCACCTTGCGTGTGAGAAGGGGATATGGGGTCCTCATCTT ATTGTCGTGCCGACTAGTGTTATGCTAAATTGGGAGACTGAATTTCTTAAGTGGTGTCCT GCTTTTAAAATACTGACTTATTTCGGAAGTGCAAAGGAAAGAAAGCAGAAGCGTCAGGGC TGGATGAAACCAAATTACTTCCATGTTTGCATCACAACATATAGGCTTGTCATTCAGGAT TCTAAAGTGTTTAAGCGAAAAAAGTGGAAGTATCTTATTCTTGATGAGGCTCATCTGATA AAGAACTGGAAATCACAGCGTTGGCAGACATTGCTCAACTTCAATTCAAAGAGACGTATT CTTCTGACTGGAACTCCACTGCAAAATGACCTTATGGAACTTTGGTCCCTCATGCATTTT TTGATGCCTCATGTATTTCAGTCTCATCAAGAGTTCAAGGATTGGTTCTGCAATCCAATT TCCGGGATGGTGGAAGGTCAAGATAAAGTAAACAAAGAAGTTATAGATCGATTGCACAAT GTCCTTCGGCCATTTATACTGCGTCGACTGAAAAGAGATGTTGAGAAACAGTTACCAAAG AAGCATGAGCATGTCATATATTGCCGACTTTCTAGAAGGCAAAGGAACTTGTATGAAGAA TTTGTCGCTAGCTCAGAGACACAAGCAACCCTGGCGAGTGGGAATTATTTTGGCATGATA AGCATCATCATGCAACTTAGAAAGGTCTGTAACCATCCAGATCTTTTTGAAGGTCGGCCA ATAATAAGCTCATTTGACATGGCTGGTATTAACATGCAGCTCAGCTATTCAGTCTGCATG CTCCTTGATAAGAGTCCATTTTCTCAGGTGGACCTGTCTGATATGAATTTTGTGTTTACT CAAAATGAATTTAGCATGAGTTCCTGGGAAGCTGACGAGGTCATCTCCGCCTTTCCTTCA AGTATCACCTCCAGGGACTGTGACCTGGATATTTTTTGCTCTAATAAGGATCATCAGGGA AGTAATTTGACAAACATTTTTGAAGATATTCAGAAAGCCCTACAGGAGGAGAGAATAAAG GAATCCAGAGAAAGGGCAGCTTCTGTTGCATGGTGGAATAGAGTTAGATGCCAAAAGAGA CCTGTCTATGGCACAAACATGAGACATGTTTTGACTGTAAAGCATCCTGTATCAAATATT CTTAATAAGAGGAACAATCCATTGTGC