Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d017654_T009
CDS Infomation

cds chromosome:B73_RefGen_v4:5:203245550:203250828:-1 gene:Zm00001d017654 gene_biotype:protein_coding transcript_biotype:protein_coding description:GPI transamidase subunit PIG-U
Sequence

ATGGTTGTAATAATGATCTACGGATCCTGTTCACGTCTGGCTCCTCTTGCTGCTTTTGGA
TATGTTATGGCCACACACCTCTCTCTTTATCCTGCAATTCTCATAGTACCGGTCATTCTG
TTGCTGGGTTATGGTCTAGATGCTCCTCCTCCAAAAGTATTTGTTATAAAAGGGTCAATT
GCCAGAAAAAGTGATGTGTCAGACAATGATAAAACAAGCAGACAGAGAGTTGTTCAGCAG
TTTTCATGGAAACCAGTACTTCACTTTATATTTTGGCTGTTCATCTGGTCGTGCCATGTG
TTGTTATTGAGCAGCGTGATTTTGAAGAAAGTTGGTGGCCTCCACGAGATGTTTGAAAAG
ACGTATGGTTTTATACTTACAGTGAAAGACCTATCACCAAATATTGGTGTTTTGTGGTAC
TTCTTTGCTGAAGTTTTCGACTTCTTTAGAAATTTCTTTCTTATGGTATTCAATATGAAC
ATCATTTTTATGGTCTTACCATTGGCCATCCGATTGAAACATCGTCCGTGCTTTCTTGCA
TTTGTTTACACGGCAATTGTGGCAATATTGAAATCTTATCCATCGGCTGGAGATTCAGCC
CTGTATCTTGGTCTTCTGGGCTTATTTGTCAACGAATTAGCAGAAATGCAGTTCACATTC
TTCTTGTTTTTTGGATATATTGGAGTCTCCCTACTTAGCCCTGTCATGCATAATCTGTGG
ATCTGGAGGGGCACTGGTAATGCAAATTTCTACTTCGCCACTGGTTTGGCTTATACTTGC
CTTCAGACTGTGTTGCTGGTAGAGAGTGTAAGTTCAATGATAAAGCACGACAGAAAGTTA
AGGCTACTTGTTACAAGCTAA

Peptide Sequence

PEP ID

Zm00001d017654_P009
PEP Infomation

pep chromosome:B73_RefGen_v4:5:203245550:203250828:-1 gene:Zm00001d017654 transcript:Zm00001d017654_T009 gene_biotype:protein_coding transcript_biotype:protein_coding description:GPI transamidase subunit PIG-U
Sequence

MVVIMIYGSCSRLAPLAAFGYVMATHLSLYPAILIVPVILLLGYGLDAPPPKVFVIKGSI
ARKSDVSDNDKTSRQRVVQQFSWKPVLHFIFWLFIWSCHVLLLSSVILKKVGGLHEMFEK
TYGFILTVKDLSPNIGVLWYFFAEVFDFFRNFFLMVFNMNIIFMVLPLAIRLKHRPCFLA
FVYTAIVAILKSYPSAGDSALYLGLLGLFVNELAEMQFTFFLFFGYIGVSLLSPVMHNLW
IWRGTGNANFYFATGLAYTCLQTVLLVESVSSMIKHDRKLRLLVTS

Transcript Sequence

Transcript ID

Zm00001d017654_T009
Transcript Infomation

cdna chromosome:B73_RefGen_v4:5:203245550:203250828:-1 gene:Zm00001d017654 gene_biotype:protein_coding transcript_biotype:protein_coding description:GPI transamidase subunit PIG-U
Sequence

ATCACGGTTCCCCATTGCTCCTGTCTGTTCTTGGTCCATTAACTAGTAGCAGGCCTGACG
GACATCATGCTCATATTTACTGCAGGTAGACATATGTTGGTATCTACCTTTCCGTTGCAA
TTAATCTGTGCTTTTTAGCCTTTTACAAGATTTACAAAATGTCGATGTATAGTTGACATT
TGTTGAAAAAGTATTTTTCCTATAGCCTTCTTTTATTTGTCTCATCATGTGAAAAAATAA
AATAAAATCCTCAGACATCTTCCATAGCTTTTTTGTGACAAAGTAAATATATGGATATGC
ATTGTTGGAGAACTTCTAAGCATTGGGGGGCATTTCTGCCAAGATGGTGTTTTGCACACA
ATATTTTCCCAACTTAAAAGTCTTATAAACTGCAAAATTTAAAAATAAAAACAATTTATT
CACAAAGTGGTTGGCATGTTGCTATTCTTTATTTTCATAGTATTATCTAGAAGACACAAC
CCATTTTTTCTTTCTTGTAATGATCAAGTAATAAAGTAGTTACGAATTTCTCATATTCAA
ACTAAAGGGACATATTCAAAGTTGTACCAATTATAAGAGAATTAAGTTGATGAGCCACAC
AATGAAGCTATAGGAGAGAGTTATCGAGCATCGTTTGAGAGGAATACCGAGGATCTCTAT
GAACCAATTTGATTTCATTCCTAGAAGGTCAACAATGGAAGCCGTTTTTTAAAATAGGTG
AAGTCGTGGTGTAGAAAGACTTAGACATGGTTTTCATCAACTTGGAATAGGCTTATGTCA
AAATACCAAGGAATGTTACGCGTTGAACTTTGGACAAACATAAAATTCCAACAAAACATG
TTAGTCTCATTAAGGACATGTACAACAATGTTGTTACTAGTGTTCGAAGAAGTAATGGGG
ACACGAATGACTTCCCGATTGGCCGATTAGAATAGGACTATATGAAGGGTCAGCTTTGAG
CCCTTACCTTTTTGTCATGGTGATGGATGAGGTCACAAGGGACATACAAAGGAATATTCC
TTGGTGTATGCTTTTGTAGAGGATGTAGTGCTAGTTGATGAAAACCAGACATGAGTAAAT
AGGAAACTAGATGTGTGGCAGGAGAATAGAGTTTGAAGGTTTTAGAACAATAGAATTAAA
ACCGAATACATAATATGTGACTTCGAAGTTCAAATACTACACATGAGGAAGGAGATGTTA
GTTTGGAAGGTCAAGTAGTGCTCAGGAAGGATGCCTTTCGGTATTTAGGATCAATGCTAC
AGAGAGATGGAGATATTGTTGAAGATGTTAGCCGCAAAATTAAAGCAGGGTGGAGGTAGT
GGCGTCAAGCATCTGATGTGCTATGTGACAAGTGGGTACCACAGAAGCTAAAAGGCAAGT
TTAATGACTGTGGTTAGATATGCTATATTGTATGGTGCAAAATGTTGGCCTAAAAAAGAC
GCCATATTCAGTAGATAAGTGTTGCGGAAATGTGTATGCTGGGTTTATGGCCATACAAGA
ATGAATCGAGCCTAGAACGATAATATACATGATAGGCTAGGTGTAGCAATTGAAGAAGTT
TGAACATGTTCAATGGGGACCTCTAGAGGCACGAGTGCATAGTGGGATCCTAAGGTGCAA
TAGTAATGTGAAGAGAGGCAGGGGAAGACCGAAGTTGATATGGAATGATAGAAACAGACA
ATAAAATGAGACTCAAAAGAACGGAATAATCTAAAGAATTAGGTTTGAAACTTTGAATAG
AACCGGATGAAAAACAACTATCCACATGCTTGAACCTTGATTTATGGCTTTTTTTTGTTT
CAAGTCTAGCCTACCCCAACTTACTTGGGACTAAAAGACTTTGTTGTTGTAGTAAGATGA
AATTGTGTAGCCTCTGCTTTCATGGTAGCGATCATTTTGCTGTCTGTATGTATGGACAAC
CTATTGTGGAAATGTTCTTAGTACTTAACACTCTAATGCTTTCAGGTTTTGCTTACTATT
TGTTAGATTGGTACTCATTATTCATAACGATATTATCGATGCAGTTAATGTAAGCGCTGG
AGATGTTGCTTCTCTCATATATTTGTGGAACCCTTGGGCAATAGTCACTTGTGTGGGATC
ATGTACATCACCAATCGAGAATCTAATGGTTGTAATAATGATCTACGGATCCTGTTCACG
TCTGGCTCCTCTTGCTGCTTTTGGATATGTTATGGCCACACACCTCTCTCTTTATCCTGC
AATTCTCATAGTACCGGTCATTCTGTTGCTGGGTTATGGTCTAGATGCTCCTCCTCCAAA
AGTATTTGTTATAAAAGGGTCAATTGCCAGAAAAAGTGATGTGTCAGACAATGATAAAAC
AAGCAGACAGAGAGTTGTTCAGCAGTTTTCATGGAAACCAGTACTTCACTTTATATTTTG
GCTGTTCATCTGGTCGTGCCATGTGTTGTTATTGAGCAGCGTGATTTTGAAGAAAGTTGG
TGGCCTCCACGAGATGTTTGAAAAGACGTATGGTTTTATACTTACAGTGAAAGACCTATC
ACCAAATATTGGTGTTTTGTGGTACTTCTTTGCTGAAGTTTTCGACTTCTTTAGAAATTT
CTTTCTTATGGTATTCAATATGAACATCATTTTTATGGTCTTACCATTGGCCATCCGATT
GAAACATCGTCCGTGCTTTCTTGCATTTGTTTACACGGCAATTGTGGCAATATTGAAATC
TTATCCATCGGCTGGAGATTCAGCCCTGTATCTTGGTCTTCTGGGCTTATTTGTCAACGA
ATTAGCAGAAATGCAGTTCACATTCTTCTTGTTTTTTGGATATATTGGAGTCTCCCTACT
TAGCCCTGTCATGCATAATCTGTGGATCTGGAGGGGCACTGGTAATGCAAATTTCTACTT
CGCCACTGGTTTGGCTTATACTTGCCTTCAGACTGTGTTGCTGGTAGAGAGTGTAAGTTC
AATGATAAAGCACGACAGAAAGTTAAGGCTACTTGTTACAAGCTAATTTGGTCCTCATAA
TCAGAAGCTCAAGTGGTGGACAGCTCCGATGCTTGCAATTCCCTACATGGTGCTCTTGAT
TCTTGAACACAAACAGCTCCTCATCTTGGAGTTCGTAGATGTAGGTCATATTCGATGTAG
CATGTTGTACTGTAGACCCCACACTTGTACAATACTAGGACCGCAACTCTTTC