Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d017653_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:5:203227844:203228980:1 gene:Zm00001d017653 gene_biotype:protein_coding transcript_biotype:protein_coding description:E3 ubiquitin-protein ligase ATL4
Sequence	ATGGACGCCCTCCCGCCGCCCGCCGCCGTCCACCCGTTCGCGGCTACGCTCCCGCCCTCA TTGTCGCCGCCGTCCTCGTCGTCGTCCCTCAACCTCTCCCCCTCGCTGCTCATCATCGCC GCGCTGCTCGCGTTCGTCTTCTTCGCCTCCGTGTCGATCCACTTCCTCCTCCGCTGCCTC GCCCGCTCGTCGGCGTCGTCGTCGTCGCATCGGGGCCCAAGCCCGCTGCCAACCAGGGCC CGCCGCGCGTCGGAGGAGGAGGCGGAGGCGGAGGAGGTGGTAGGGTCCACGAGGAGGAGC GCCGCGGCGGTGGGGCCGGAAGAGGCGCATGCTGCGGAGGTGGACGACGAGAAGGAGCGC CTGATCGCATCTCTGCCGCTGTTCACGATGGCGTCGGCGCTGGCGGCGCTTCCAAAGAGC TCCCCCGACTGCGCCGTCTGTCTCTCGCCCTTCTCCCCCGACGCCGACCTGCGGCTGCTC CCGGCGTGCCGGCACGCCTTCCACGCCGCCTGCGTCGACGCCTGGCTGCGCACTACGCCG TCGTGCCCGCTATGCCGCGCCGCCGTCTCGCTCCCGCACCCGCCGCTCCCCACCGCGCCA CCGCTCGCCGCGGGGAGCGCCCAGGAGGCGCTCGACTCGCGGGTCAGCAGCAGCAGCAAC TCGAGGAGTTTCCGCGTCGAGATCGGCAGCGTCAGCAACCGCCGCTCCTCTGCCGCGGGC GACGACCGCCGCACCTACTCGCTCGGCTCCTTCGACTACCGCGTCGACGAGGAGGTGGAG GCCGTCGTGTCCCGCATCACCCGCCCCGCGGTGTCGGCGGCGGCCAAGTCGGAGACACAG GCGGCGCCCGGAGAGGCGCTAGCGGAGGCAGCCGGGTCCCGCGGCTGGCTGCGCGAGTAC GTGGACCGCCTCGCGTCCTCGGCCTCCTCCCTCTCCGGGCGGTGGAGCGCGCGGTGGAGC CAGGGACACCACAGCGCGCGGTGGAGCCAGGGACACCACAGCCGCAGCCATAGCAACCGG CAGGAAGACTCGTTGTGGTGGGACCCGGAGGCGGCGGCGGGCGCGGCGATGCACCGCGCG CCGGACGAGGAGGAGCCGGGGTTCGTCGCCCTGTACCGTTGGATCGTCGGGGTGTAG

Peptide Sequence

PEP ID	Zm00001d017653_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:5:203227844:203228980:1 gene:Zm00001d017653 transcript:Zm00001d017653_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:E3 ubiquitin-protein ligase ATL4
Sequence	MDALPPPAAVHPFAATLPPSLSPPSSSSSLNLSPSLLIIAALLAFVFFASVSIHFLLRCL ARSSASSSSHRGPSPLPTRARRASEEEAEAEEVVGSTRRSAAAVGPEEAHAAEVDDEKER LIASLPLFTMASALAALPKSSPDCAVCLSPFSPDADLRLLPACRHAFHAACVDAWLRTTP SCPLCRAAVSLPHPPLPTAPPLAAGSAQEALDSRVSSSSNSRSFRVEIGSVSNRRSSAAG DDRRTYSLGSFDYRVDEEVEAVVSRITRPAVSAAAKSETQAAPGEALAEAAGSRGWLREY VDRLASSASSLSGRWSARWSQGHHSARWSQGHHSRSHSNRQEDSLWWDPEAAAGAAMHRA PDEEEPGFVALYRWIVGV

Transcript Sequence

Transcript ID	Zm00001d017653_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:203227844:203228980:1 gene:Zm00001d017653 gene_biotype:protein_coding transcript_biotype:protein_coding description:E3 ubiquitin-protein ligase ATL4
Sequence	ATGGACGCCCTCCCGCCGCCCGCCGCCGTCCACCCGTTCGCGGCTACGCTCCCGCCCTCA TTGTCGCCGCCGTCCTCGTCGTCGTCCCTCAACCTCTCCCCCTCGCTGCTCATCATCGCC GCGCTGCTCGCGTTCGTCTTCTTCGCCTCCGTGTCGATCCACTTCCTCCTCCGCTGCCTC GCCCGCTCGTCGGCGTCGTCGTCGTCGCATCGGGGCCCAAGCCCGCTGCCAACCAGGGCC CGCCGCGCGTCGGAGGAGGAGGCGGAGGCGGAGGAGGTGGTAGGGTCCACGAGGAGGAGC GCCGCGGCGGTGGGGCCGGAAGAGGCGCATGCTGCGGAGGTGGACGACGAGAAGGAGCGC CTGATCGCATCTCTGCCGCTGTTCACGATGGCGTCGGCGCTGGCGGCGCTTCCAAAGAGC TCCCCCGACTGCGCCGTCTGTCTCTCGCCCTTCTCCCCCGACGCCGACCTGCGGCTGCTC CCGGCGTGCCGGCACGCCTTCCACGCCGCCTGCGTCGACGCCTGGCTGCGCACTACGCCG TCGTGCCCGCTATGCCGCGCCGCCGTCTCGCTCCCGCACCCGCCGCTCCCCACCGCGCCA CCGCTCGCCGCGGGGAGCGCCCAGGAGGCGCTCGACTCGCGGGTCAGCAGCAGCAGCAAC TCGAGGAGTTTCCGCGTCGAGATCGGCAGCGTCAGCAACCGCCGCTCCTCTGCCGCGGGC GACGACCGCCGCACCTACTCGCTCGGCTCCTTCGACTACCGCGTCGACGAGGAGGTGGAG GCCGTCGTGTCCCGCATCACCCGCCCCGCGGTGTCGGCGGCGGCCAAGTCGGAGACACAG GCGGCGCCCGGAGAGGCGCTAGCGGAGGCAGCCGGGTCCCGCGGCTGGCTGCGCGAGTAC GTGGACCGCCTCGCGTCCTCGGCCTCCTCCCTCTCCGGGCGGTGGAGCGCGCGGTGGAGC CAGGGACACCACAGCGCGCGGTGGAGCCAGGGACACCACAGCCGCAGCCATAGCAACCGG CAGGAAGACTCGTTGTGGTGGGACCCGGAGGCGGCGGCGGGCGCGGCGATGCACCGCGCG CCGGACGAGGAGGAGCCGGGGTTCGTCGCCCTGTACCGTTGGATCGTCGGGGTGTAG