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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d017639_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:5:202840915:202841791:-1 gene:Zm00001d017639 gene_biotype:protein_coding transcript_biotype:protein_coding description:Chitinase 1

Sequence

ATGACGAACGGCTTCCTGTTTCGGGAGTACATCGGCGCGCAGTTCACCGGCGTCCAGTTC
AGCGACGTGCCCATCAACTCCAAGCTCGCCTTCAACTTCATCCTCGCCTTCGCCATCGAC
TACACGCCGGTGAACCAGCATCCCACGCCGGCGCCCACCAACGGCGTGTTCAGCCCGTTC
TGGGACACGGGGAACCTGTCCCCGGCCGCCGTGGCCGCCATCAAGGCCGCGCACCCGAAC
GTGGCCGTCATGGCGGGGCTCGGCGGCGACAGCGTGCAGGACATCGTCAAGGCCGTCTTC
ACCCCGACCTCCATCGACTCGTGGGTGGCCAACGCCGTGACGTCGCTCACGGGCATCATC
AACACGTACGGGCTCGACGGCGTCGACGTCGATTACGAGCACTTCTCCCGCGGCGCTGAC
GTGAACACCTTCGTCGAGTGCATCGGCCGCCTCCTGACGCAGCTCAAGAAAAACATGCCG
TGGATCACCACCTCCATCGCGCCGTTCGAGGACCCCGTGGTCCAGAAGTACTACCAGCCG
CTGTGGGGCAAGTACTCCGGCGTCATCGACTACGTCAACTTCCAGTTCTACGGCTACGGC
GACAACACCGACGTCGCCACGTACGTCCAGTTCTACGACCAGCAGTCGGCGAACTACCCC
GGCGGCAAGGTCCTCGCCAGCTTCATGACTGGCAACACCACCGGCCTGATCTCGCCGGAC
CTCGGCATCAGCGCCGCCAAGGAGCTGCAGCGGCAGAACAAGCTGCCGGGCCTCTTCATC
TGGTCAGCCGACAGCTCCAAGAGGAGCAGCTATGGCTTCAAGTACGAGATCGAGGGGCAG
CAGATCATTGCCAACCATTGA

Peptide Sequence

PEP ID

Zm00001d017639_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:5:202840915:202841791:-1 gene:Zm00001d017639 transcript:Zm00001d017639_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Chitinase 1

Sequence

MTNGFLFREYIGAQFTGVQFSDVPINSKLAFNFILAFAIDYTPVNQHPTPAPTNGVFSPF
WDTGNLSPAAVAAIKAAHPNVAVMAGLGGDSVQDIVKAVFTPTSIDSWVANAVTSLTGII
NTYGLDGVDVDYEHFSRGADVNTFVECIGRLLTQLKKNMPWITTSIAPFEDPVVQKYYQP
LWGKYSGVIDYVNFQFYGYGDNTDVATYVQFYDQQSANYPGGKVLASFMTGNTTGLISPD
LGISAAKELQRQNKLPGLFIWSADSSKRSSYGFKYEIEGQQIIANH

Transcript Sequence

Transcript ID

Zm00001d017639_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:5:202840915:202841791:-1 gene:Zm00001d017639 gene_biotype:protein_coding transcript_biotype:protein_coding description:Chitinase 1

Sequence

TCTATCTAGGTCAACCATGACGAACGGCTTCCTGTTTCGGGAGTACATCGGCGCGCAGTT
CACCGGCGTCCAGTTCAGCGACGTGCCCATCAACTCCAAGCTCGCCTTCAACTTCATCCT
CGCCTTCGCCATCGACTACACGCCGGTGAACCAGCATCCCACGCCGGCGCCCACCAACGG
CGTGTTCAGCCCGTTCTGGGACACGGGGAACCTGTCCCCGGCCGCCGTGGCCGCCATCAA
GGCCGCGCACCCGAACGTGGCCGTCATGGCGGGGCTCGGCGGCGACAGCGTGCAGGACAT
CGTCAAGGCCGTCTTCACCCCGACCTCCATCGACTCGTGGGTGGCCAACGCCGTGACGTC
GCTCACGGGCATCATCAACACGTACGGGCTCGACGGCGTCGACGTCGATTACGAGCACTT
CTCCCGCGGCGCTGACGTGAACACCTTCGTCGAGTGCATCGGCCGCCTCCTGACGCAGCT
CAAGAAAAACATGCCGTGGATCACCACCTCCATCGCGCCGTTCGAGGACCCCGTGGTCCA
GAAGTACTACCAGCCGCTGTGGGGCAAGTACTCCGGCGTCATCGACTACGTCAACTTCCA
GTTCTACGGCTACGGCGACAACACCGACGTCGCCACGTACGTCCAGTTCTACGACCAGCA
GTCGGCGAACTACCCCGGCGGCAAGGTCCTCGCCAGCTTCATGACTGGCAACACCACCGG
CCTGATCTCGCCGGACCTCGGCATCAGCGCCGCCAAGGAGCTGCAGCGGCAGAACAAGCT
GCCGGGCCTCTTCATCTGGTCAGCCGACAGCTCCAAGAGGAGCAGCTATGGCTTCAAGTA
CGAGATCGAGGGGCAGCAGATCATTGCCAACCATTGA