Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d017616_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:5:201801849:201802910:-1 gene:Zm00001d017616 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:pale aleurone color1 description:Anthocyanin biosynthetic gene regulator PAC1
Sequence	ATGGACCCACCCAAGCCGCCGTCCTCGGTCGCCTCGTCGTCGGGGCCGGAGACGCCGAAC CCGCACGCCTTCACCTGCGAGCTCCCGCACTCGATCTACGCGCTCGCCTTCTCCCCCGTC GCGCCCGTCCTCGCCTCCGGCAGCTTCCTCGAGGACCTCCACAACCGCGTCTCCCTGCTC TCCTTCGACCCCGTCCGCCCCTCCGCCGCCTCCTTCCGCGCCCTCCCGGCGCTCTCCTTC GACCACCCTTACCCACCCACCAAGCTCCAGTTCAACCCCCGCGCCGCCGCGCCGTCCCTC CTCGCCTCCTCCGCCGACACGCTCCGCATCTGGCACACCCCGCTCGACGACCTCTCCGAC ACCGCCCCCGCGCCCGAGCTCCGCTCCGTTCTCGACAACCGCAAGGCCTCCTCCGAGTTC TGCGCACCCCTCACCTCCTTCGATTGGAACGAGGTCGAGCCCCGCCGTATCGGGACCGCC TCCATCGACACCACCTGCACCGTCTGGGACATCGATCGCGGGGTCGTGGAGACGCAGCTC ATCGCGCACGACAAGGCCGTGCACGACATCGCCTGGGGGGAGGCCGGGGTCTTCGCCTCC GTATCGGCCGACGGCTCCGTCCGCGTCTTCGACCTTCGGGACAAGGAGCACTCCACCATC GTCTACGAGAGCCCCCGCCCCGACACGCCGCTACTAAGGCTGGCGTGGAACCGCTCTGAC CTCCGCTATATGGCCGCGCTGCTCATGGACAGCAGCGCCGTCGTCGTGCTCGACATACGT GCGCCCGGGGTGCCGGTGGCCGAGCTGCACCGGCACCGGGCGTGCGCCAACGCAGTCGCG TGGGCGCCGCAAGCCACTAGGCACCTCTGTTCGGCTGGGGACGACGGGCAAGCATTGATC TGGGAACTGCCTGAGACGGCGGCGGCTGTACCCGCCGAGGGGATTGATCCTGTGCTAGTG TACGATGCAGGCGCCGAAATAAACCAACTTCAGTGGGCGGCCGCGCACCCGGACTGGATG GCCATCGCCTTTGAGAACAAGGTCCAGCTTCTTAGGGTCTGA

Peptide Sequence

PEP ID	Zm00001d017616_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:5:201801849:201802910:-1 gene:Zm00001d017616 transcript:Zm00001d017616_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:pale aleurone color1 description:Anthocyanin biosynthetic gene regulator PAC1
Sequence	MDPPKPPSSVASSSGPETPNPHAFTCELPHSIYALAFSPVAPVLASGSFLEDLHNRVSLL SFDPVRPSAASFRALPALSFDHPYPPTKLQFNPRAAAPSLLASSADTLRIWHTPLDDLSD TAPAPELRSVLDNRKASSEFCAPLTSFDWNEVEPRRIGTASIDTTCTVWDIDRGVVETQL IAHDKAVHDIAWGEAGVFASVSADGSVRVFDLRDKEHSTIVYESPRPDTPLLRLAWNRSD LRYMAALLMDSSAVVVLDIRAPGVPVAELHRHRACANAVAWAPQATRHLCSAGDDGQALI WELPETAAAVPAEGIDPVLVYDAGAEINQLQWAAAHPDWMAIAFENKVQLLRV

Transcript Sequence

Transcript ID	Zm00001d017616_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:201801849:201802910:-1 gene:Zm00001d017616 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:pale aleurone color1 description:Anthocyanin biosynthetic gene regulator PAC1
Sequence	ATGGACCCACCCAAGCCGCCGTCCTCGGTCGCCTCGTCGTCGGGGCCGGAGACGCCGAAC CCGCACGCCTTCACCTGCGAGCTCCCGCACTCGATCTACGCGCTCGCCTTCTCCCCCGTC GCGCCCGTCCTCGCCTCCGGCAGCTTCCTCGAGGACCTCCACAACCGCGTCTCCCTGCTC TCCTTCGACCCCGTCCGCCCCTCCGCCGCCTCCTTCCGCGCCCTCCCGGCGCTCTCCTTC GACCACCCTTACCCACCCACCAAGCTCCAGTTCAACCCCCGCGCCGCCGCGCCGTCCCTC CTCGCCTCCTCCGCCGACACGCTCCGCATCTGGCACACCCCGCTCGACGACCTCTCCGAC ACCGCCCCCGCGCCCGAGCTCCGCTCCGTTCTCGACAACCGCAAGGCCTCCTCCGAGTTC TGCGCACCCCTCACCTCCTTCGATTGGAACGAGGTCGAGCCCCGCCGTATCGGGACCGCC TCCATCGACACCACCTGCACCGTCTGGGACATCGATCGCGGGGTCGTGGAGACGCAGCTC ATCGCGCACGACAAGGCCGTGCACGACATCGCCTGGGGGGAGGCCGGGGTCTTCGCCTCC GTATCGGCCGACGGCTCCGTCCGCGTCTTCGACCTTCGGGACAAGGAGCACTCCACCATC GTCTACGAGAGCCCCCGCCCCGACACGCCGCTACTAAGGCTGGCGTGGAACCGCTCTGAC CTCCGCTATATGGCCGCGCTGCTCATGGACAGCAGCGCCGTCGTCGTGCTCGACATACGT GCGCCCGGGGTGCCGGTGGCCGAGCTGCACCGGCACCGGGCGTGCGCCAACGCAGTCGCG TGGGCGCCGCAAGCCACTAGGCACCTCTGTTCGGCTGGGGACGACGGGCAAGCATTGATC TGGGAACTGCCTGAGACGGCGGCGGCTGTACCCGCCGAGGGGATTGATCCTGTGCTAGTG TACGATGCAGGCGCCGAAATAAACCAACTTCAGTGGGCGGCCGCGCACCCGGACTGGATG GCCATCGCCTTTGAGAACAAGGTCCAGCTTCTTAGGGTCTGA