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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d017608_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:5:201460778:201462840:-1 gene:Zm00001d017608 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:methyl erythritol cyclodiphosphate synthase2 description: methyl erythritol cyclodiphosphate synthase2
Sequence

ATGGCCACCGCGCCCTACGCCTCCTCCCTCTTCCTGGCTTCCTCCCCCATCTCCACCGCG
CCACGAATCCGCGCCGGGCCCTGCCCTCCGTCCGCCCAGCCATCCCTGCGGCTCCGGCCG
AGGCCGTCCCCGGCAGCCGCGGCCGCCGTCCAGGCGGAGCACCAGCCCGCGTTGACCGCG
GCGCCGAAGCCACCCGCGCTACCGTTCCGCGTGGGCCACGGCTTCGACCTCCACCGCCTG
GAGCCCGACCTCCCGCTCATCATCGGCGGCATCAACATCCCCCACGACCGCGGCTGCGAG
GCTCACTCTGACGGCGACGTGCTGCTGCACTGCGTGGTGGACGCGATTCTCGGCGCGCTG
GGGCTGCCAGACATCGGCCAGATTTTCCCGGACTCCGACCCCCGTTGGAAGGGCGCCGAT
TCTTCGGTGTTCATGAGGGAAGCTGTGAAATTGATGCATGAAGCAGGCTACGAGCTGGGC
AACCTTGATGCTACGCTGATCTTGCAAAAACCAAAAATTAGCCCATTCAAGGAGACAATC
CGATCGAATTTGTGCGACCTACTTGGGGCAGATCCATCTGTGGTCAATCTCAAGGCCAAG
ACGCACGAGAAAGTTGACAGTCTAGGGGAGAACAGGAGCATAGCTGCTCATACTGTAGTT
CTCCTGATGCGAAAGTAG

Peptide Sequence

PEP ID

Zm00001d017608_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:5:201460778:201462840:-1 gene:Zm00001d017608 transcript:Zm00001d017608_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:methyl erythritol cyclodiphosphate synthase2 description: methyl erythritol cyclodiphosphate synthase2
Sequence

MATAPYASSLFLASSPISTAPRIRAGPCPPSAQPSLRLRPRPSPAAAAAVQAEHQPALTA
APKPPALPFRVGHGFDLHRLEPDLPLIIGGINIPHDRGCEAHSDGDVLLHCVVDAILGAL
GLPDIGQIFPDSDPRWKGADSSVFMREAVKLMHEAGYELGNLDATLILQKPKISPFKETI
RSNLCDLLGADPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRK

Transcript Sequence

Transcript ID

Zm00001d017608_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:5:201460778:201462840:-1 gene:Zm00001d017608 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:methyl erythritol cyclodiphosphate synthase2 description: methyl erythritol cyclodiphosphate synthase2
Sequence

AAAAACGCAAGGATTTCTCGGTTCCTCCTCGTCCTCGCGCTCTCCCGGTCTCCTCTCCCC
CGAGCATCCCAAAAAATACTCGGCCACTGCGCTATCTCGCCCACCAAGCCAGCACCAGCA
GCGGCGCGCGATGGCCACCGCGCCCTACGCCTCCTCCCTCTTCCTGGCTTCCTCCCCCAT
CTCCACCGCGCCACGAATCCGCGCCGGGCCCTGCCCTCCGTCCGCCCAGCCATCCCTGCG
GCTCCGGCCGAGGCCGTCCCCGGCAGCCGCGGCCGCCGTCCAGGCGGAGCACCAGCCCGC
GTTGACCGCGGCGCCGAAGCCACCCGCGCTACCGTTCCGCGTGGGCCACGGCTTCGACCT
CCACCGCCTGGAGCCCGACCTCCCGCTCATCATCGGCGGCATCAACATCCCCCACGACCG
CGGCTGCGAGGCTCACTCTGACGGCGACGTGCTGCTGCACTGCGTGGTGGACGCGATTCT
CGGCGCGCTGGGGCTGCCAGACATCGGCCAGATTTTCCCGGACTCCGACCCCCGTTGGAA
GGGCGCCGATTCTTCGGTGTTCATGAGGGAAGCTGTGAAATTGATGCATGAAGCAGGCTA
CGAGCTGGGCAACCTTGATGCTACGCTGATCTTGCAAAAACCAAAAATTAGCCCATTCAA
GGAGACAATCCGATCGAATTTGTGCGACCTACTTGGGGCAGATCCATCTGTGGTCAATCT
CAAGGCCAAGACGCACGAGAAAGTTGACAGTCTAGGGGAGAACAGGAGCATAGCTGCTCA
TACTGTAGTTCTCCTGATGCGAAAGTAGAAAGAACAAATGGCAGCTAATTGTATCATGCT
ACACGGAAAAGGTTGTTATCTTATACTTGTGATTGTTGAGTGATCTAGCCAGTATGGAAA
ATCTTCATGTGGTAGAAACAATAAAGCTGATTGCAATGAGAATTTTTCTGTATTTCACTT
GTGCTGTCAATTTGCTTCATGGATTCCCCCCCTTCTAC