Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d017607_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:5:201446152:201457676:1 gene:Zm00001d017607 gene_biotype:protein_coding transcript_biotype:protein_coding description: protein; Pentatricopeptide (PPR) repeat-containing protein-like
Sequence

ATGATTCTCATGTTCATATTTGAGACGTATCTTGACATCCGTCAGCATAGGGCCCTCAAG
CTGCCAACTTTGCCCAAACCCCTGCTGGGAGTAATCAGTGATGAAAAGTTTGAACGCTCT
AGAGCTTATAGCCTTGATAAAAGCTACTTCCATTTTGTCCATGAGTTTGTGACTATTTTA
ATGGATACCACAATACTGTACTACAGATCCGTTCCCTGGTTTTGGAAGAAATCTGGAGAG
TTAGTTACCAATGTTGGGCTGAATGCTGAGAATGAGATAATACACACCCTTGCATTCTTA
GCTGGTGCCATGGTTTGGTCAAAGATTACAGACTTGTCGTTCTCTATTTATTCAACTTTT
GTTATAGAGGCTCGACATGGTTTTAACAAGCAAACTATATGGCTCTTCATCAGGGATATG
ATCAAAGGAGTTTTACTATTCATGATACTGGGGCCACCAATCGTGGCTGCTATCATCTAC
ATAGTACAGATTGGAGGACCCTACCTGGATATATATCTCTTTGGTTTTATGTTTGCATTA
GCTCTTCTGATGATGACAATATACCCCATTGTGATAGCTCCTCTGTTCAACAAGTTCACC
CCTCTTCCTGAAGGAGTCCTCAGGGAGAAAATAGAGAAGCTGGCAGCTTCCCTCAAATTT
CCTTTGAAAAAACTTTTCGTGGTAGATGGGTCTACCAGATCAAGCCACAGTAATGCTTAC
ATGTATGGATTTTTTAAGAATAAACGCATAGTACTCTATGACACATTGATTCAGCAGTGT
ACCAATGAGGATGAGATAGTTTCTGTTATTGCACATGAACTTGGGCACTGGAAACTCAAT
CATATTGTCTATTCCTTTGTAGCTGTCCAGCTGCTTATGTTTCTTCAATTTGGAGGATAT
ACTCTAGTAAGGAACTCCAAAGATCTATTTCAAAGTTTTGGCTTCGAGGATCAGCCAATA
ATAACTGGACTGATCATTTTCCAGCACACCAGAATACCCATCCAACACCTTCTGAGCTTT
TGCCTGAACCTTGTCAGCAGAGCATTTGAATTTCAGGCTGATGCCTTTGCCAAGAACCTT
GGATATGCCCCTCAGCTCCGAGCGGCCCTTGTTAAACTACATGAGGAGAACTTGTCTGCA
ATGAACACCGATCCTTGGTATTCGGCATATCACTACTCCCACCCACCTCTCGTCGAAAGG
CTGCAAGCTCTTGAAGATTCAGACGCCAAAAAAAATGACTAA

Peptide Sequence

PEP ID

Zm00001d017607_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:5:201446152:201457676:1 gene:Zm00001d017607 transcript:Zm00001d017607_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description: protein; Pentatricopeptide (PPR) repeat-containing protein-like
Sequence

MILMFIFETYLDIRQHRALKLPTLPKPLLGVISDEKFERSRAYSLDKSYFHFVHEFVTIL
MDTTILYYRSVPWFWKKSGELVTNVGLNAENEIIHTLAFLAGAMVWSKITDLSFSIYSTF
VIEARHGFNKQTIWLFIRDMIKGVLLFMILGPPIVAAIIYIVQIGGPYLDIYLFGFMFAL
ALLMMTIYPIVIAPLFNKFTPLPEGVLREKIEKLAASLKFPLKKLFVVDGSTRSSHSNAY
MYGFFKNKRIVLYDTLIQQCTNEDEIVSVIAHELGHWKLNHIVYSFVAVQLLMFLQFGGY
TLVRNSKDLFQSFGFEDQPIITGLIIFQHTRIPIQHLLSFCLNLVSRAFEFQADAFAKNL
GYAPQLRAALVKLHEENLSAMNTDPWYSAYHYSHPPLVERLQALEDSDAKKND

Transcript Sequence

Transcript ID

Zm00001d017607_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:5:201446152:201457676:1 gene:Zm00001d017607 gene_biotype:protein_coding transcript_biotype:protein_coding description: protein; Pentatricopeptide (PPR) repeat-containing protein-like
Sequence

GCTTTATGATTCTCATGTTCATATTTGAGACGTATCTTGACATCCGTCAGCATAGGGCCC
TCAAGCTGCCAACTTTGCCCAAACCCCTGCTGGGAGTAATCAGTGATGAAAAGTTTGAAC
GCTCTAGAGCTTATAGCCTTGATAAAAGCTACTTCCATTTTGTCCATGAGTTTGTGACTA
TTTTAATGGATACCACAATACTGTACTACAGATCCGTTCCCTGGTTTTGGAAGAAATCTG
GAGAGTTAGTTACCAATGTTGGGCTGAATGCTGAGAATGAGATAATACACACCCTTGCAT
TCTTAGCTGGTGCCATGGTTTGGTCAAAGATTACAGACTTGTCGTTCTCTATTTATTCAA
CTTTTGTTATAGAGGCTCGACATGGTTTTAACAAGCAAACTATATGGCTCTTCATCAGGG
ATATGATCAAAGGAGTTTTACTATTCATGATACTGGGGCCACCAATCGTGGCTGCTATCA
TCTACATAGTACAGATTGGAGGACCCTACCTGGATATATATCTCTTTGGTTTTATGTTTG
CATTAGCTCTTCTGATGATGACAATATACCCCATTGTGATAGCTCCTCTGTTCAACAAGT
TCACCCCTCTTCCTGAAGGAGTCCTCAGGGAGAAAATAGAGAAGCTGGCAGCTTCCCTCA
AATTTCCTTTGAAAAAACTTTTCGTGGTAGATGGGTCTACCAGATCAAGCCACAGTAATG
CTTACATGTATGGATTTTTTAAGAATAAACGCATAGTACTCTATGACACATTGATTCAGC
AGTGTACCAATGAGGATGAGATAGTTTCTGTTATTGCACATGAACTTGGGCACTGGAAAC
TCAATCATATTGTCTATTCCTTTGTAGCTGTCCAGCTGCTTATGTTTCTTCAATTTGGAG
GATATACTCTAGTAAGGAACTCCAAAGATCTATTTCAAAGTTTTGGCTTCGAGGATCAGC
CAATAATAACTGGACTGATCATTTTCCAGCACACCAGAATACCCATCCAACACCTTCTGA
GCTTTTGCCTGAACCTTGTCAGCAGAGCATTTGAATTTCAGGCTGATGCCTTTGCCAAGA
ACCTTGGATATGCCCCTCAGCTCCGAGCGGCCCTTGTTAAACTACATGAGGAGAACTTGT
CTGCAATGAACACCGATCCTTGGTATTCGGCATATCACTACTCCCACCCACCTCTCGTCG
AAAGGCTGCAAGCTCTTGAAGATTCAGACGCCAAAAAAAATGACTAACGCCAACTGTCAG
AGCTGTTGTTCCTGATGGGGCGAAGCCTTGATCCTTGTACGAGGTTTCCATGAGGGTACG
ATTCATTGGTTGAGTGTTGTAAAAGCTCTGTAAGCATCCAGCACGAAGATGCTTACATGC
ACGTTGAGAAATATTA