Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d017603_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:5:201334831:201336336:-1 gene:Zm00001d017603 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat (PPR) superfamily protein
Sequence	ATGCCGCCGCCGCCGCCACCACCAATCACCGCTGCACCCATGATCCCGGCATCCCCAAAA AAGCCGATCCCGTCCCCGCGCCAAATCGCAGCGCTAGTGCTGAGCCATCCGTCCTCCACG CTCACCGCCGCGTCGGCGCGCTCCCTCTCGGCGTCCCTCCTGGCCGCCGGCCCCGCGTCC GCGTTCCCGATCCCGACCCCCGTGGCCAACGCCGTCATCAAACTCCTGTGGCACCACGCC CCACGCGCGCTCCTCTTCTTCCACGCTCTCCTCCGCCTCCCAGAGCGCTCGCGCGACCTC TCCCCGTGCACGGTCGACCTCGCGCTCGACCTCGCCGCGCGCCTGCGCCACCCACGTCAG CTCACGAGCTCCATCCTCGCGCTCTTCCCGCGCCACGGCCTCGCCTTCACCCCGCGCACG TTCCCCATCCTGTTCGAGCGGTTTGCGATGTCCCACCGCCGCCCCGACCTCGCCATCCGG CTCTTCCTCTCTCTCCACCGCTCCCACGGCATCGCGCAGGACCTCCCGTTGTTCAATTCC CTCCTCGACGCGCTCGTCAAGTCGCGGCGCGCGAGCAAGGCGGCCTCCCTCGTCCGTGCC CTCGAGCAGCGGTTCCCTCCTGACGCGGTCACGTACAACACCCTGGCTGACGGATGGTGC CGCGTCAAGGACACCTCCCGTGCGCTCGACATCTTGCGGCAGATGGTCGAGTCAGGGATT GCCCCAACGAAAGCAACCTATAACATCATCCTCAAAGGTTTCTTCCGTTCTGGACAGTTG CAGCACGCATGGGACTTCTTCCTCCAGATGAAGAGGAGAGGCAGCAATGACGAGAACTGT AAGCCTGACGTCGTATCGTACACCACCGTACTGCACGGGCTCGGTGTTGCCGGGCAGCTG GACAAAGCCCGCAAAGTGTTTGACGAAATGTCTATAGAAGGATGCAAGCCATCGACTGCG ACTTATAACGCATTAATTCAGGTAACCTGTAAGAAGGGCAACTTGGAGGATGCCGTGGCA GTGTTTGATGATATGGTCAGAAAGGGTTACATTCCAAATGTGGTTACCTATACTGTCTTG ATCCGAGGCCTCTGCCATGCTGGGAAGGTTGTTCGAGCTATGAAGCTTTTGGATAGGATG AAGAGTGAAGGTTGTGAGCCTAATGTTCAGACATACAACGTTCTTATCAGGTATTCACTT GAGGAAGGGGAGATTGAGAAAGGCTTGGATTTGTTCGAGACAATGAGCAAGGGAGAGGAA TGCTTGCCCAACCAAGATACATATAATATTATAATAAGTGCAATGTTTGTGCGTAAGAGG GCAGAGGACATGGCGGTGGCTGCCAGAATGGTGGTGGAAATGGTGGATAGGGGCTACTTG CCAAGAAAGTTTATGTTCAATCGTGTACTGAATGGATTAATGTTGACTGGAAATCAAGAG CTTTCTAGAGAGCTCTTGAGAATGCAGGAGAAATATACGCGCTTGCGACGAGAAATAAGA TTGTGA

Peptide Sequence

PEP ID	Zm00001d017603_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:5:201334831:201336336:-1 gene:Zm00001d017603 transcript:Zm00001d017603_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat (PPR) superfamily protein
Sequence	MPPPPPPPITAAPMIPASPKKPIPSPRQIAALVLSHPSSTLTAASARSLSASLLAAGPAS AFPIPTPVANAVIKLLWHHAPRALLFFHALLRLPERSRDLSPCTVDLALDLAARLRHPRQ LTSSILALFPRHGLAFTPRTFPILFERFAMSHRRPDLAIRLFLSLHRSHGIAQDLPLFNS LLDALVKSRRASKAASLVRALEQRFPPDAVTYNTLADGWCRVKDTSRALDILRQMVESGI APTKATYNIILKGFFRSGQLQHAWDFFLQMKRRGSNDENCKPDVVSYTTVLHGLGVAGQL DKARKVFDEMSIEGCKPSTATYNALIQVTCKKGNLEDAVAVFDDMVRKGYIPNVVTYTVL IRGLCHAGKVVRAMKLLDRMKSEGCEPNVQTYNVLIRYSLEEGEIEKGLDLFETMSKGEE CLPNQDTYNIIISAMFVRKRAEDMAVAARMVVEMVDRGYLPRKFMFNRVLNGLMLTGNQE LSRELLRMQEKYTRLRREIRL

Transcript Sequence

Transcript ID	Zm00001d017603_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:201334831:201336336:-1 gene:Zm00001d017603 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat (PPR) superfamily protein
Sequence	ATGCCGCCGCCGCCGCCACCACCAATCACCGCTGCACCCATGATCCCGGCATCCCCAAAA AAGCCGATCCCGTCCCCGCGCCAAATCGCAGCGCTAGTGCTGAGCCATCCGTCCTCCACG CTCACCGCCGCGTCGGCGCGCTCCCTCTCGGCGTCCCTCCTGGCCGCCGGCCCCGCGTCC GCGTTCCCGATCCCGACCCCCGTGGCCAACGCCGTCATCAAACTCCTGTGGCACCACGCC CCACGCGCGCTCCTCTTCTTCCACGCTCTCCTCCGCCTCCCAGAGCGCTCGCGCGACCTC TCCCCGTGCACGGTCGACCTCGCGCTCGACCTCGCCGCGCGCCTGCGCCACCCACGTCAG CTCACGAGCTCCATCCTCGCGCTCTTCCCGCGCCACGGCCTCGCCTTCACCCCGCGCACG TTCCCCATCCTGTTCGAGCGGTTTGCGATGTCCCACCGCCGCCCCGACCTCGCCATCCGG CTCTTCCTCTCTCTCCACCGCTCCCACGGCATCGCGCAGGACCTCCCGTTGTTCAATTCC CTCCTCGACGCGCTCGTCAAGTCGCGGCGCGCGAGCAAGGCGGCCTCCCTCGTCCGTGCC CTCGAGCAGCGGTTCCCTCCTGACGCGGTCACGTACAACACCCTGGCTGACGGATGGTGC CGCGTCAAGGACACCTCCCGTGCGCTCGACATCTTGCGGCAGATGGTCGAGTCAGGGATT GCCCCAACGAAAGCAACCTATAACATCATCCTCAAAGGTTTCTTCCGTTCTGGACAGTTG CAGCACGCATGGGACTTCTTCCTCCAGATGAAGAGGAGAGGCAGCAATGACGAGAACTGT AAGCCTGACGTCGTATCGTACACCACCGTACTGCACGGGCTCGGTGTTGCCGGGCAGCTG GACAAAGCCCGCAAAGTGTTTGACGAAATGTCTATAGAAGGATGCAAGCCATCGACTGCG ACTTATAACGCATTAATTCAGGTAACCTGTAAGAAGGGCAACTTGGAGGATGCCGTGGCA GTGTTTGATGATATGGTCAGAAAGGGTTACATTCCAAATGTGGTTACCTATACTGTCTTG ATCCGAGGCCTCTGCCATGCTGGGAAGGTTGTTCGAGCTATGAAGCTTTTGGATAGGATG AAGAGTGAAGGTTGTGAGCCTAATGTTCAGACATACAACGTTCTTATCAGGTATTCACTT GAGGAAGGGGAGATTGAGAAAGGCTTGGATTTGTTCGAGACAATGAGCAAGGGAGAGGAA TGCTTGCCCAACCAAGATACATATAATATTATAATAAGTGCAATGTTTGTGCGTAAGAGG GCAGAGGACATGGCGGTGGCTGCCAGAATGGTGGTGGAAATGGTGGATAGGGGCTACTTG CCAAGAAAGTTTATGTTCAATCGTGTACTGAATGGATTAATGTTGACTGGAAATCAAGAG CTTTCTAGAGAGCTCTTGAGAATGCAGGAGAAATATACGCGCTTGCGACGAGAAATAAGA TTGTGA