Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d017544_T004
CDS Infomation	cds chromosome:B73_RefGen_v4:5:199139746:199141994:1 gene:Zm00001d017544 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pseudouridine synthase family protein
Sequence	ATGGCCGCCGCCTCGCCGCCGCCCTCCCCACCCCACGCAAAGCGCCCCAAGATGTCCTCC TCCTCCGACCCGGAAGCCGATGCTGAGCCCACCTCGGCCTCCGCCGCCGTTGAGGGCGCC GATCCTGCGCAGCGTCGTCCCAGGTACAAGCGCCGCAAGGTCGCCATCCTTCTCGGGTAC TGCGGCGCGGGGTATCAGGGCATGCAGAAGAATCCGGGCGCGCGCACCATCGAGGGGGAC CTCGAGGAGGCGCTCTACCAGGCGGGCGCCGTGCCCGAGGCCGACCGGTCCGCGCCGCGC CGTTACGATTGGGCACGTGCTGCGCGCACCGACAAGGGCGTCAGCGCCGCGGCGCAGGTG GTGTCCGGGCGCTTCTACGTCGACCCGCCGGGCTTCATCGATCGCTTGAACGCGCAGCTC GCGCCGCAGATCCGCGCTTACGGCTACGTGCGCGTTACCAACTCATTCAACGCGAAAAAG TTCTGCGACCGCCGGAGGTACCTGTATCTGCTTCCCGTATTTGCTCTTGACCCCAGCGCA CACCCGGACCGCGAGGCCGTCATGGCGAGCATGGGGAGTGGGAGCGAGCTTACCAAGTGC CTGGAGTGCTCCGAGAGAGGCAGGAAGATTCCTGGTGTCATGGGCCGGGAGGGGAAACTG CCCAGCCCCGGGCAGAATGGTGTTGATGCTCCCGTGGAGGGAAGTAGCCATGACGAATCT GGAACACTTGGGGATGCAAAATGTGACCATACAAGTTCAGATGGTAATAACCCATTTGCC CATGGGGAAGTTGGATCGAACAGCAAGGAGAAGCCTGATTTACCGGTCTCTGGTGATAGA ACTGAAGTTGCAAATGCAAAGATGGGATCAAATGGCGACGGTGCTGTTGTATCATCAGAT ATTTATATTGGGAACGAGGAGAAGAAACTTGAGCCTGCAGCCACTGAAAATAAAGCTCAA GGTATGGAATCTGAGAAGATCAATGGAGAAGAGAAACTGCCAACTAAGAGTACCTTTTCT TACACTGATGAAGTGAAGGAGAGGTTCAACAGGATTCTCAAGTACTATATTGGGACACAC AATTTCCATAACTTCACTACAAGAACCAAAGCAGAGGATCCTGCAGCAAAAAGATTTATC ATTTCCTTTGCTGCTGACCGTGTTGTCAGCCTGGATGGGATTGATTTTGTCAGGTGTGAA GTTGTTGGACAGAGTTTCATGCTCCATCAGATCCGGAAGATGATTGGTCTTGCTGTAGCT GTGATGAGGAACTGTGCACCTGAATCAATTTATGATGTCGCTTTTCGCAAGTATGAATCT TATAAGCTTTTAGGTATTAAGCAATCCATATAA

Peptide Sequence

PEP ID	Zm00001d017544_P004
PEP Infomation	pep chromosome:B73_RefGen_v4:5:199139746:199141994:1 gene:Zm00001d017544 transcript:Zm00001d017544_T004 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pseudouridine synthase family protein
Sequence	MAAASPPPSPPHAKRPKMSSSSDPEADAEPTSASAAVEGADPAQRRPRYKRRKVAILLGY CGAGYQGMQKNPGARTIEGDLEEALYQAGAVPEADRSAPRRYDWARAARTDKGVSAAAQV VSGRFYVDPPGFIDRLNAQLAPQIRAYGYVRVTNSFNAKKFCDRRRYLYLLPVFALDPSA HPDREAVMASMGSGSELTKCLECSERGRKIPGVMGREGKLPSPGQNGVDAPVEGSSHDES GTLGDAKCDHTSSDGNNPFAHGEVGSNSKEKPDLPVSGDRTEVANAKMGSNGDGAVVSSD IYIGNEEKKLEPAATENKAQGMESEKINGEEKLPTKSTFSYTDEVKERFNRILKYYIGTH NFHNFTTRTKAEDPAAKRFIISFAADRVVSLDGIDFVRCEVVGQSFMLHQIRKMIGLAVA VMRNCAPESIYDVAFRKYESYKLLGIKQSI

Transcript Sequence

Transcript ID	Zm00001d017544_T004
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:199139746:199141994:1 gene:Zm00001d017544 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pseudouridine synthase family protein
Sequence	GATCCGAGCCGCCACCAAACCCTAACTATCTAAACCCCCCGTCTCGCTGTCCGATGGCCG CCGCCTCGCCGCCGCCCTCCCCACCCCACGCAAAGCGCCCCAAGATGTCCTCCTCCTCCG ACCCGGAAGCCGATGCTGAGCCCACCTCGGCCTCCGCCGCCGTTGAGGGCGCCGATCCTG CGCAGCGTCGTCCCAGGTACAAGCGCCGCAAGGTCGCCATCCTTCTCGGGTACTGCGGCG CGGGGTATCAGGGCATGCAGAAGAATCCGGGCGCGCGCACCATCGAGGGGGACCTCGAGG AGGCGCTCTACCAGGCGGGCGCCGTGCCCGAGGCCGACCGGTCCGCGCCGCGCCGTTACG ATTGGGCACGTGCTGCGCGCACCGACAAGGGCGTCAGCGCCGCGGCGCAGGTGGTGTCCG GGCGCTTCTACGTCGACCCGCCGGGCTTCATCGATCGCTTGAACGCGCAGCTCGCGCCGC AGATCCGCGCTTACGGCTACGTGCGCGTTACCAACTCATTCAACGCGAAAAAGTTCTGCG ACCGCCGGAGGTACCTGTATCTGCTTCCCGTATTTGCTCTTGACCCCAGCGCACACCCGG ACCGCGAGGCCGTCATGGCGAGCATGGGGAGTGGGAGCGAGCTTACCAAGTGCCTGGAGT GCTCCGAGAGAGGCAGGAAGATTCCTGGTGTCATGGGCCGGGAGGGGAAACTGCCCAGCC CCGGGCAGAATGGTGTTGATGCTCCCGTGGAGGGAAGTAGCCATGACGAATCTGGAACAC TTGGGGATGCAAAATGTGACCATACAAGTTCAGATGGTAATAACCCATTTGCCCATGGGG AAGTTGGATCGAACAGCAAGGAGAAGCCTGATTTACCGGTCTCTGGTGATAGAACTGAAG TTGCAAATGCAAAGATGGGATCAAATGGCGACGGTGCTGTTGTATCATCAGATATTTATA TTGGGAACGAGGAGAAGAAACTTGAGCCTGCAGCCACTGAAAATAAAGCTCAAGGTATGG AATCTGAGAAGATCAATGGAGAAGAGAAACTGCCAACTAAGAGTACCTTTTCTTACACTG ATGAAGTGAAGGAGAGGTTCAACAGGATTCTCAAGTACTATATTGGGACACACAATTTCC ATAACTTCACTACAAGAACCAAAGCAGAGGATCCTGCAGCAAAAAGATTTATCATTTCCT TTGCTGCTGACCGTGTTGTCAGCCTGGATGGGATTGATTTTGTCAGGTGTGAAGTTGTTG GACAGAGTTTCATGCTCCATCAGATCCGGAAGATGATTGGTCTTGCTGTAGCTGTGATGA GGAACTGTGCACCTGAATCAATTTATGATGTCGCTTTTCGCAAGTATGAATCTTATAAGC TTTTAGGTATTAAGCAATCCATATAACATATGTTTGCACGCTTACGCCATGTGTGTTGCA GGGATGTCAATCTTAATGTGCCTACTGCACCTGAGGTCGGACTGTACCTAGATGAATGTA TGTTCACATCATACAACAAGAAATGGAAGGATTCACATGAGGCAGTTTCCATGGAACCTT ATTCTGAGGAGGCCGAAGAGTTCAAGGTCAAGTATATTTTCACTCATATTGCGGCGATGG AACACAAGGAGGGAGCTGTAGCTTTGTGGTTGCATTCATTGAACCACAGAAATTATCCAG ATTTCCGTTACATGGAAACTGCCGAGCACAATCCTGGTGCTGAAGTTGAGAGTATTGCTG CTGGTGCAGAGCCCAAGGTTGGAGCTGAAGTTGAGAATACTGAAGAAGTACAGATGCCAA GCGACAATCTAAGTGAGTAATAAATTTTGCCAAGGGGCATGCAAAACTGAAGAAAATATC TGTTTGTCGTGTTACTGAGAGGGACCTCAAACATTTCTAATGAGATATCGTAATATAGAG AATGAAAACTCATATGTTCTCCAATGGAATATGAACATCAAGAGGTTAATGTGCATCACT TTATGCCATCATGATCCCTATGTTAATCTTCTGAAATAAGAACCTATAGGTCTATATTAG TCTTATATCTGAACTTCATTAATTGCTTCCAGACAATTGTATGACAAATGGCACTCGGAA ATGTTTCAGCAATGTTTTTGTTTGCTGAAATTATTATGGGATTCACTATTTTCTCT