Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d017540_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:5:199061996:199063027:-1 gene:Zm00001d017540 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:geranylgeranyl pyrophosphate synthase4 description: geranylgeranyl pyrophosphate synthase4
Sequence	ATGGCTCTCTCCTCCCTCTTCATCACCCTCCCCATCCCCAATGTCCCTTCCCCCAAACCC CGCCGCATGCTCACCTCCCGGGCATCCTCCGATGCTCCCGCCGCCTCTGCTTCCTTTGAC CTGCGCCGCTACTGGACCTCTCTGATCGCCGATGTGGAGTCCGAACTCGACGCGGCGATG CCCATGCAACCTCCGGAAAGCATCCACTACGCCATGCGCTACGCGGTGCTCCCGGGCGCC GGCAAGGAGGGAGCCGCCAAGCGGGCGCCCCCCGTGCTCTGCGTCGCCGCGTGCGAGCTC CTCGGCGCCCCGCGAGCGGCCGCACTCCCGGCCGCCGCGGCGCTGGAGATGCTCCACGCG GCGTCGCTCGTGCTCGTGCACGACGACCTGCCCTGCTTCGACGCAGCACCCACGCGACGC GGACGCCCATCCACGCACGCGGCGTACGGCACCGACATGGCCGTCCTCGCGGGCGACGCT CTCTTCCCGCTGGCCTACACCCACGTCATCTCCCACACCCCGTCCCCGGACCCGGTCCCC CACGCCGTCCTCCTGCGCGTCCTCGCGGAGCTCGCGCGCGCTGTCGGATCCACCGGCATG GCGGCCGGTCAGTTCCTCGATCTGGCCGGTGCTACCGCCCTTGGCGAGGCCGAGGTCATG CAGGTCCTGACGAAGAAGTTCGGGGAGATGGCCGAATGTTCCGCGGCCTGTGGCGCCATG CTCGGTGGGGCCGGGCCAGACGAGGAGGCCGAGCTGCGACGCTACGGCCGCACCATCGGC GTCCTGTACGAGCTTGTCGACGACATCCGGAGCGCATCGGGAAACGGCAAGATGAGGAGC AACGCTAGCGTCCTGCGCTCCCTGGGGATGGACCGCGCGCTTGGCATTGTGGAGGAGCTC AAGGCTCAGGCCAAGACAACGGCTGACAGGTTCGCGGAAAAATACGGCGATCGGGTGCTG CCCTTGTACAGCTTCGTGGACTACGCGGTGGAGAGGGGGTTTGAGCTACAGGATGCAGCG GCAACTCCATAG

Peptide Sequence

PEP ID	Zm00001d017540_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:5:199061996:199063027:-1 gene:Zm00001d017540 transcript:Zm00001d017540_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:geranylgeranyl pyrophosphate synthase4 description: geranylgeranyl pyrophosphate synthase4
Sequence	MALSSLFITLPIPNVPSPKPRRMLTSRASSDAPAASASFDLRRYWTSLIADVESELDAAM PMQPPESIHYAMRYAVLPGAGKEGAAKRAPPVLCVAACELLGAPRAAALPAAAALEMLHA ASLVLVHDDLPCFDAAPTRRGRPSTHAAYGTDMAVLAGDALFPLAYTHVISHTPSPDPVP HAVLLRVLAELARAVGSTGMAAGQFLDLAGATALGEAEVMQVLTKKFGEMAECSAACGAM LGGAGPDEEAELRRYGRTIGVLYELVDDIRSASGNGKMRSNASVLRSLGMDRALGIVEEL KAQAKTTADRFAEKYGDRVLPLYSFVDYAVERGFELQDAAATP

Transcript Sequence

Transcript ID	Zm00001d017540_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:199061996:199063027:-1 gene:Zm00001d017540 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:geranylgeranyl pyrophosphate synthase4 description: geranylgeranyl pyrophosphate synthase4
Sequence	ATGGCTCTCTCCTCCCTCTTCATCACCCTCCCCATCCCCAATGTCCCTTCCCCCAAACCC CGCCGCATGCTCACCTCCCGGGCATCCTCCGATGCTCCCGCCGCCTCTGCTTCCTTTGAC CTGCGCCGCTACTGGACCTCTCTGATCGCCGATGTGGAGTCCGAACTCGACGCGGCGATG CCCATGCAACCTCCGGAAAGCATCCACTACGCCATGCGCTACGCGGTGCTCCCGGGCGCC GGCAAGGAGGGAGCCGCCAAGCGGGCGCCCCCCGTGCTCTGCGTCGCCGCGTGCGAGCTC CTCGGCGCCCCGCGAGCGGCCGCACTCCCGGCCGCCGCGGCGCTGGAGATGCTCCACGCG GCGTCGCTCGTGCTCGTGCACGACGACCTGCCCTGCTTCGACGCAGCACCCACGCGACGC GGACGCCCATCCACGCACGCGGCGTACGGCACCGACATGGCCGTCCTCGCGGGCGACGCT CTCTTCCCGCTGGCCTACACCCACGTCATCTCCCACACCCCGTCCCCGGACCCGGTCCCC CACGCCGTCCTCCTGCGCGTCCTCGCGGAGCTCGCGCGCGCTGTCGGATCCACCGGCATG GCGGCCGGTCAGTTCCTCGATCTGGCCGGTGCTACCGCCCTTGGCGAGGCCGAGGTCATG CAGGTCCTGACGAAGAAGTTCGGGGAGATGGCCGAATGTTCCGCGGCCTGTGGCGCCATG CTCGGTGGGGCCGGGCCAGACGAGGAGGCCGAGCTGCGACGCTACGGCCGCACCATCGGC GTCCTGTACGAGCTTGTCGACGACATCCGGAGCGCATCGGGAAACGGCAAGATGAGGAGC AACGCTAGCGTCCTGCGCTCCCTGGGGATGGACCGCGCGCTTGGCATTGTGGAGGAGCTC AAGGCTCAGGCCAAGACAACGGCTGACAGGTTCGCGGAAAAATACGGCGATCGGGTGCTG CCCTTGTACAGCTTCGTGGACTACGCGGTGGAGAGGGGGTTTGAGCTACAGGATGCAGCG GCAACTCCATAG