Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d017526_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:5:198707054:198710453:1 gene:Zm00001d017526 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:plasma membrane intrinsic protein1 description:Aquaporin PIP1-2

Sequence

ATGGAGGGGAAAGAGGAGGACGTGCGCCTGGGCGCCAACAAGTTCTCGGAGCGCCAGCCC
ATCGGGACGGCGGCGCAGGGCGCCGCTGACGACAAGGACTACAAGGAGCCCCCGCCGGCG
CCGCTGTTCGAGCCCGGGGAGCTCAAGTCCTGGTCCTTCTACCGCGCGGGCATCGCCGAG
TTCGTCGCCACCTTCCTCTTCCTCTACATCACCATCCTCACCGTCATGGGCGTCTCCAAG
TCCACCTCCAAGTGCGCCACCGTCGGCATCCAGGGCATCGCCTGGTCCTTCGGAGGAATG
ATCTTCGCGCTCGTCTACTGCACCGCCGGCATCTCCGGAGGACACATCAACCCAGCTGTG
ACTTTCGGGCTGTTCTTAGCCAGGAAGCTGTCCCTGACTAGGGCCCTCTTCTACATCATC
ATGCAATGCCTGGGTGCCATCTGTGGAGCTGGAGTGGTGAAGGGCTTCCAGCAGGGACTT
TACATGGGCAACGGTGGTGGCGCCAATGTTGTCGCACCTGGCTACACCAAGGGTGATGGC
CTTGGCGCTGAGATTGTTGGCACCTTCATCCTAGTCTACACCGTCTTCTCAGCCACCGAT
GCCAAGAGGAATGCCAGGGACTCCCATGTTCCTATCCTTGCCCCACTGCCAATTGGGTTC
GCGGTGTTCCTGGTCCACCTTGCCACCATCCCCATTACTGGCACTGGCATCAACCCAGCT
AGGAGCCTTGGCGCTGCCATCATCTACAACAGGGATCACGCCTGGAACGACCATTGGATC
TTCTGGGTCGGCCCCTTCATTGGCGCTGCTCTGGCTGCCATCTACCACCAGGTGATCATC
AGAGCCATCCCGTTCAAGAGCAGGTCTTAA

Peptide Sequence

PEP ID

Zm00001d017526_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:5:198707054:198710453:1 gene:Zm00001d017526 transcript:Zm00001d017526_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:plasma membrane intrinsic protein1 description:Aquaporin PIP1-2

Sequence

MEGKEEDVRLGANKFSERQPIGTAAQGAADDKDYKEPPPAPLFEPGELKSWSFYRAGIAE
FVATFLFLYITILTVMGVSKSTSKCATVGIQGIAWSFGGMIFALVYCTAGISGGHINPAV
TFGLFLARKLSLTRALFYIIMQCLGAICGAGVVKGFQQGLYMGNGGGANVVAPGYTKGDG
LGAEIVGTFILVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPA
RSLGAAIIYNRDHAWNDHWIFWVGPFIGAALAAIYHQVIIRAIPFKSRS

Transcript Sequence

Transcript ID

Zm00001d017526_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:5:198707054:198710453:1 gene:Zm00001d017526 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:plasma membrane intrinsic protein1 description:Aquaporin PIP1-2

Sequence

CAGAAGGGACAGCGTCCGTGTCTTCCTTGCTCACTCTCCTCACCACTACCCTGACCTGAC
CTGCTCCCAAGCTCCCTCTGCCTGCCTTTATAAATCACCGGGGCAGAGCGCCTCAGTGAC
ACACGCCGCTGCTCCAAGAAACCACCGCCGAGCCCAACCGCACAAGCGCGCGAGGCAGGA
GAGAGAGAGAGGCGGGGAGCAAAACAATGGAGGGGAAAGAGGAGGACGTGCGCCTGGGCG
CCAACAAGTTCTCGGAGCGCCAGCCCATCGGGACGGCGGCGCAGGGCGCCGCTGACGACA
AGGACTACAAGGAGCCCCCGCCGGCGCCGCTGTTCGAGCCCGGGGAGCTCAAGTCCTGGT
CCTTCTACCGCGCGGGCATCGCCGAGTTCGTCGCCACCTTCCTCTTCCTCTACATCACCA
TCCTCACCGTCATGGGCGTCTCCAAGTCCACCTCCAAGTGCGCCACCGTCGGCATCCAGG
GCATCGCCTGGTCCTTCGGAGGAATGATCTTCGCGCTCGTCTACTGCACCGCCGGCATCT
CCGGAGGACACATCAACCCAGCTGTGACTTTCGGGCTGTTCTTAGCCAGGAAGCTGTCCC
TGACTAGGGCCCTCTTCTACATCATCATGCAATGCCTGGGTGCCATCTGTGGAGCTGGAG
TGGTGAAGGGCTTCCAGCAGGGACTTTACATGGGCAACGGTGGTGGCGCCAATGTTGTCG
CACCTGGCTACACCAAGGGTGATGGCCTTGGCGCTGAGATTGTTGGCACCTTCATCCTAG
TCTACACCGTCTTCTCAGCCACCGATGCCAAGAGGAATGCCAGGGACTCCCATGTTCCTA
TCCTTGCCCCACTGCCAATTGGGTTCGCGGTGTTCCTGGTCCACCTTGCCACCATCCCCA
TTACTGGCACTGGCATCAACCCAGCTAGGAGCCTTGGCGCTGCCATCATCTACAACAGGG
ATCACGCCTGGAACGACCATTGGATCTTCTGGGTCGGCCCCTTCATTGGCGCTGCTCTGG
CTGCCATCTACCACCAGGTGATCATCAGAGCCATCCCGTTCAAGAGCAGGTCTTAAGCTG
CCGTGGCCGTGCCGAGACATGCCAGTCCGAAGAACGGGCGTCTTCCTGTGATGTCTTCTT
GTCTGCCCACGCCTAGTTTCTCTGTCGATTCCTATTCGTCGTCTCTTCAGGGCTGGTGCT
CACTGCTGCGCCGTTCTGTTAACCGAAACAAGAACTCTGTGTATTCCTGTACCGAGCTGT
GCATGTTTTTTTCTTTCCATCGTGGAGAATTTAAGTTATTATCCGTTTGCTGCAAGGTTT
GCCGTCTCATTTTATGCGTTGGGATGTTGGCAAGAAAGGGCAGATGTCATGTGAGAATTT
AAGTTAAGTGAAATCGATTCAGGGTTTTCTTGGTTTCAGT