Gene sequences

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SNP Detection
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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d017525_T019
CDS Infomation	cds chromosome:B73_RefGen_v4:5:198715367:198720800:-1 gene:Zm00001d017525 gene_biotype:protein_coding transcript_biotype:protein_coding description:Mitogen-activated protein kinase kinase kinase YODA
Sequence	ATGCCACCATGGTGGGGAAAATCTTCATCCAAAGAAGTGAAAAAGTCTGCCAAAGAAAAC CTCATCGACACATTTCAGCGTCTCATAAGTTCAAATGAGCAAAAGGGAAGCAGAAAATCA CGAAGTAGTCGTAGACATGGTAAAGACACAGCTGGTGACAAAGGTTGCTGGTCCACTGCC CAATCCCGCTCAACATCCCCTTCAAAAGAGGTCTCTCGATGTCAGAGCTTTGCAGCAGAT AGACCACATGCACAGCCACTTCCTCTTCCCAAATCACGTGCTAAGGTGACACGTACTTCT TCTGATATTACCAACTCAAAGTCCACTTTGGAAAAGCATGGCAAAGGACAACTGCTTCCA CTCCCTCCAATTCAGCCTAAAAAAAGACCTGAAGCTACTGAACCTGTTACTGAAGTAGCT ACTGCTTCGGTCTCCAGCAACTGTTCTATTGACAGTGATGATCCTGGTGATTCTCAGCTT CAGAGTCCTGTGGGAAATGAGGCTGAAAATGCGACTAGAATTACTGCAACAAGTAGTTCA AGTGTTGTGCGCAAAGAATGTTCTAGTGCTATTACCAGAAAGAACACAAAGGAAGTTGCA AAGCCAAACAGTGCTTTTCTCAGTAACCAAATCCTGTCAACATCTCCAAGAGGTACCTTT GCTGATGGTTATCAATCCAATTTACAAAGCCCCCGACAGATTGCCCTGGAGAGTGCTCCG AATAGTTTGATGTCAAGTCCTTCTCGAAGCCCAAGAAATATATGTCCTGTTCAGATTCCA ACTTCAGCTTTTTGGGCAATAAAACCTCATACTGATGTAACTTTCCTTGGGTCTGGTCAG TGCTCCAGTCCAGGTTCTGGTCAGACATCTGGGCATAATTCAGTGGGAGGTGATATGCTA GGCCCAATCTTTTGGCAGCCTAGCCGAGGTAGTCCAGAGTGTTCACCAATTCCAAGCCCA AGAATGACGAGTCCTGGTCCAAGTTCTCGGGTGCATAGTGGAAGTGTCTCTCCTTTGCAT CCAAGAGCTGGTGGGGTCACTCCTGAATCCCCAACAAATCGACATGCTGAAGGGAACAAG AAGCAAACCCACAGATTGCCGCTTCCGCCATTAAGCATTGCTAATAGTTCTACCTTTTTG CCAAACAGCTCTAACCCAACTAGTCCTATATCTCGTAGTCCTGGTAGAACAGAGAATCCA CCGAGTCCTGGTTCACGGTGGAAGAAGGGAAAATTGATTGGCCGTGGGACATTTGGCCAT GTATATGCTGGTTTTAACAGTGACAGAGGTGAAATGTGTGCGATGAAGGAGGTTACCCTT TTCTCAGATGATCCTAAATCAAAAGAAAGTGCAAAACAGCTCTGCCAGGAAATATCACTT CTGAGCCGACTGCAGCACCCAAACATTGTGCGATACTATGGATCTGAAACTGTTGATGAT AAGCTTTACATATACCTGGAGTATGTTTCTGGTGGATCTATACATAAGCTTCTCCAAGAG TATGGACAGTTTGGTGAACAAGCCATTTGCAGTTATACTAAGCAAATACTTTTGGGCCTA GCTTATTTGCATGCAAAGAATACAGTACACAGAGACATCAAAGGCGCAAACATATTGGTA GACCCTAATGGCCGCGTGAAGCTCGCTGACTTTGGGATGGCAAAACATGTAGGTTTTCTG CTCGTC

Peptide Sequence

PEP ID	Zm00001d017525_P019
PEP Infomation	pep chromosome:B73_RefGen_v4:5:198715367:198720800:-1 gene:Zm00001d017525 transcript:Zm00001d017525_T019 gene_biotype:protein_coding transcript_biotype:protein_coding description:Mitogen-activated protein kinase kinase kinase YODA
Sequence	MPPWWGKSSSKEVKKSAKENLIDTFQRLISSNEQKGSRKSRSSRRHGKDTAGDKGCWSTA QSRSTSPSKEVSRCQSFAADRPHAQPLPLPKSRAKVTRTSSDITNSKSTLEKHGKGQLLP LPPIQPKKRPEATEPVTEVATASVSSNCSIDSDDPGDSQLQSPVGNEAENATRITATSSS SVVRKECSSAITRKNTKEVAKPNSAFLSNQILSTSPRGTFADGYQSNLQSPRQIALESAP NSLMSSPSRSPRNICPVQIPTSAFWAIKPHTDVTFLGSGQCSSPGSGQTSGHNSVGGDML GPIFWQPSRGSPECSPIPSPRMTSPGPSSRVHSGSVSPLHPRAGGVTPESPTNRHAEGNK KQTHRLPLPPLSIANSSTFLPNSSNPTSPISRSPGRTENPPSPGSRWKKGKLIGRGTFGH VYAGFNSDRGEMCAMKEVTLFSDDPKSKESAKQLCQEISLLSRLQHPNIVRYYGSETVDD KLYIYLEYVSGGSIHKLLQEYGQFGEQAICSYTKQILLGLAYLHAKNTVHRDIKGANILV DPNGRVKLADFGMAKHVGFLLV

Transcript Sequence

Transcript ID	Zm00001d017525_T019
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:198715367:198720800:-1 gene:Zm00001d017525 gene_biotype:protein_coding transcript_biotype:protein_coding description:Mitogen-activated protein kinase kinase kinase YODA
Sequence	GGAGCACACAGCAGACAAGGCGAACAATAACTGCCCCCCCTTCATCCTCCCCCGCTCCCG TCGTCGTCTCCTTTCCACCCCCTTTCCCCCGCCCCCTGCATCCTGCATTACCCCCCTCGC GCGTCCCTCTCCGATCCCTCACCCCCCAGATTCCTCCTGCCTACGCTCGCGGGTCTCTCC TGCCCGCCCGATTTCGCCTCGGACCTCGTCGTCCATGGTGTGCTTTTTCTTCGTGGCGAT TTGCTGCGCCTCGTCGCCGGCGACCTTGGCGCTTGCAGGCGGCCGACTGCAGTAGGGCAG GTCTGCTTCCACAGACGTCTTCGCCGTTTGAGAGGTGGCGCCCACCTCCACCGTCTCGTC TGCTGCCTGCTCTAGTGGTGCCGGACCTGGGGTGGAGCGGAGATCCACAAGGGCTTGGAT TGCTTTCGTTGTCTTGCTGGGTGGAGATGACACTAAGTTGAAATTTTTATCACACGAGGA AGCAAGAACAGGAAAAAAAATCACATTTCAGTGTTGCACTCTGTGGAGGGTTCATTGTTG GTCCACCAAACTACTGCAGTGCTGGAGGGTTTTTGTTGAAGTCCTCTTCATGTTCACCAT TTCTAAATTGTCATAGGCTCATAGCATTATCTTCCTATGAGTACATAGATAAATCATCAT CGTATCTGTGTTAAGTATGCCACCATGGTGGGGAAAATCTTCATCCAAAGAAGTGAAAAA GTCTGCCAAAGAAAACCTCATCGACACATTTCAGCGTCTCATAAGTTCAAATGAGCAAAA GGGAAGCAGAAAATCACGAAGTAGTCGTAGACATGGTAAAGACACAGCTGGTGACAAAGG TTGCTGGTCCACTGCCCAATCCCGCTCAACATCCCCTTCAAAAGAGGTCTCTCGATGTCA GAGCTTTGCAGCAGATAGACCACATGCACAGCCACTTCCTCTTCCCAAATCACGTGCTAA GGTGACACGTACTTCTTCTGATATTACCAACTCAAAGTCCACTTTGGAAAAGCATGGCAA AGGACAACTGCTTCCACTCCCTCCAATTCAGCCTAAAAAAAGACCTGAAGCTACTGAACC TGTTACTGAAGTAGCTACTGCTTCGGTCTCCAGCAACTGTTCTATTGACAGTGATGATCC TGGTGATTCTCAGCTTCAGAGTCCTGTGGGAAATGAGGCTGAAAATGCGACTAGAATTAC TGCAACAAGTAGTTCAAGTGTTGTGCGCAAAGAATGTTCTAGTGCTATTACCAGAAAGAA CACAAAGGAAGTTGCAAAGCCAAACAGTGCTTTTCTCAGTAACCAAATCCTGTCAACATC TCCAAGAGGTACCTTTGCTGATGGTTATCAATCCAATTTACAAAGCCCCCGACAGATTGC CCTGGAGAGTGCTCCGAATAGTTTGATGTCAAGTCCTTCTCGAAGCCCAAGAAATATATG TCCTGTTCAGATTCCAACTTCAGCTTTTTGGGCAATAAAACCTCATACTGATGTAACTTT CCTTGGGTCTGGTCAGTGCTCCAGTCCAGGTTCTGGTCAGACATCTGGGCATAATTCAGT GGGAGGTGATATGCTAGGCCCAATCTTTTGGCAGCCTAGCCGAGGTAGTCCAGAGTGTTC ACCAATTCCAAGCCCAAGAATGACGAGTCCTGGTCCAAGTTCTCGGGTGCATAGTGGAAG TGTCTCTCCTTTGCATCCAAGAGCTGGTGGGGTCACTCCTGAATCCCCAACAAATCGACA TGCTGAAGGGAACAAGAAGCAAACCCACAGATTGCCGCTTCCGCCATTAAGCATTGCTAA TAGTTCTACCTTTTTGCCAAACAGCTCTAACCCAACTAGTCCTATATCTCGTAGTCCTGG TAGAACAGAGAATCCACCGAGTCCTGGTTCACGGTGGAAGAAGGGAAAATTGATTGGCCG TGGGACATTTGGCCATGTATATGCTGGTTTTAACAGTGACAGAGGTGAAATGTGTGCGAT GAAGGAGGTTACCCTTTTCTCAGATGATCCTAAATCAAAAGAAAGTGCAAAACAGCTCTG CCAGGAAATATCACTTCTGAGCCGACTGCAGCACCCAAACATTGTGCGATACTATGGATC TGAAACTGTTGATGATAAGCTTTACATATACCTGGAGTATGTTTCTGGTGGATCTATACA TAAGCTTCTCCAAGAGTATGGACAGTTTGGTGAACAAGCCATTTGCAGTTATACTAAGCA AATACTTTTGGGCCTAGCTTATTTGCATGCAAAGAATACAGTACACAGAGACATCAAAGG CGCAAACATATTGGTAGACCCTAATGGCCGCGTGAAGCTCGCTGACTTTGGGATGGCAAA ACATGTAGGTTTTCTGCTCGTCTT