Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d017518_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:5:198526127:198527905:-1 gene:Zm00001d017518 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein
Sequence	ATGCCCCAACCGGCCTCGGTTTCCGTCTCTAACACCCTCCTTCGCTCCTACTCCGGTCTC GGCTTCCACCGACAGGCCCTCGCTCTCTACTCACAGATGCGCCACTTCGACCACCTCACC TTCACCTTTGCCGCCAAAGCATGTGCCGGCCTCCGCCTCAGGCGCCATGGGCGCGCCGTG CACGGCCGCGCCCTCGCCGCGGGCTTCGGCAGCGACGCCTACGTGCAGAACGCGATCGTT TCCATGTATATGCGATGCAGAGACGTGGCCGCAGCGGAGGCAGTGTTCGTCGCGCTGCCG AGCCGAACAACCGTGTCGTGGAATACCGTCATTACCGGGTGTGTCAAGGACGGCCGCGCG GAGAGGGCGTTGGAGGTGTTCGAGACGATGGTTGATCGTGGCGTGTGCATTGACCGTGCC TCTGTTGTTTCAGTGCTGCCAGCTTGTGCACAAGCCAGGGACTTGCACACGGGGAGAGCT GTGCACCGGTTGGCTGTGGTGAGAGGCTTGGGGAAGTATGTCGCGGTGAAGAACGCTCTG ATCGACATGTATGGCAAGTGCGGGAGCCTGGAGGATGCAAGAAGGGTGTTCGATGAAGAC AGCTACGATAAGGATGTTGTTTCTTGGACGGTGATGATTGGTGCATACGTGTTGAATGAC CATGCGAGCAAGGCCTTCGCGCTTGGTTCTGAGATGCTGGTGAGCAGTGAAGCACAGCCT AATGCTGTGACCATGGCGCATCTGCTCTCAGCTTGCGCCAGCTTGCTCTCAGGGAAGCAT GCCAAGTGCACACATGCATTGTGCATTAGACTTGGGCTTGGATCAGATATTGTTGTTGAA ACTGCACTTGTTGACTGTTACGCAAAATGTGGATATATGGGAGTGATAGACATGGTGGTC GAGAAAGGATCACGACGGACTGAAACATGGAATGCAGCAATCTCTGGTTATACTCAAAGA GATCAGGGAAAGAAAGCCCTAGCTCTGTTTAAACGAATGCTTGCAGAATCAGTGCGTCCA GATTCTGCAACGATGGCAAGCGTCATCCCAGCTTATGCAGAGTCCGCGGACCTGGTACAG GCGAATAACATCCACTGCTGCCTACTGGTTCGTGGATGTCTTGTGAGTACAGATATTGCC ACGGGTCTAATCGATCTGTATGCCAAGGCTGGTGACTTGGGTGTCGCATGGGAGCTCTTC CAGTGCTTACCTGAAAAGGATGTTGTTGCCTGGACAACTGTCATCGCCGGATACGGCATG CACGGGCATGCCCAAACTGCCATGCTGCTATATTCCAGGATGGTGGAGCTGGGGGTGATG CCGAACACCGTCACCATCGCCTCATTGCTGCACTCTTGTAGCCACGCTGGCATGGTAGAT GAAGGGCTTCGGCTGTTCAACGACATGCACGGCGTCCATGGCCTGATGCCAAACGCAGAG CACTACTTGTGCCTGGTTGACATGCTTGGGCGTGCTGGGAGGATAGAGGAGGCTTACCGC CGCATCGAAGACATGCCATTTGAGCCGACTGTGTCGGTGTGGAGCTCTCTGCTGGGTGCC TGTGTTCTCCACGAGAATGTTGAGTTCGGCGAGGTCGCTGCTAAACATCTGTTTGAGCTT GAACCGGATAACGTTGGGAATTATGTGCTCCTTGGGAAGGTATATGCTGCAGCTGAGAGA TGGAGCGATGTTCAACATCTGAGGAGAGTGATGGAAGGAATGGATCTTCACAAAGATCCA GGATATTGTGTAGTCGATGCAAAGTCTGAAGTGTGCTGA

Peptide Sequence

PEP ID	Zm00001d017518_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:5:198526127:198527905:-1 gene:Zm00001d017518 transcript:Zm00001d017518_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein
Sequence	MPQPASVSVSNTLLRSYSGLGFHRQALALYSQMRHFDHLTFTFAAKACAGLRLRRHGRAV HGRALAAGFGSDAYVQNAIVSMYMRCRDVAAAEAVFVALPSRTTVSWNTVITGCVKDGRA ERALEVFETMVDRGVCIDRASVVSVLPACAQARDLHTGRAVHRLAVVRGLGKYVAVKNAL IDMYGKCGSLEDARRVFDEDSYDKDVVSWTVMIGAYVLNDHASKAFALGSEMLVSSEAQP NAVTMAHLLSACASLLSGKHAKCTHALCIRLGLGSDIVVETALVDCYAKCGYMGVIDMVV EKGSRRTETWNAAISGYTQRDQGKKALALFKRMLAESVRPDSATMASVIPAYAESADLVQ ANNIHCCLLVRGCLVSTDIATGLIDLYAKAGDLGVAWELFQCLPEKDVVAWTTVIAGYGM HGHAQTAMLLYSRMVELGVMPNTVTIASLLHSCSHAGMVDEGLRLFNDMHGVHGLMPNAE HYLCLVDMLGRAGRIEEAYRRIEDMPFEPTVSVWSSLLGACVLHENVEFGEVAAKHLFEL EPDNVGNYVLLGKVYAAAERWSDVQHLRRVMEGMDLHKDPGYCVVDAKSEVC

Transcript Sequence

Transcript ID	Zm00001d017518_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:198526127:198527905:-1 gene:Zm00001d017518 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein
Sequence	ATGCCCCAACCGGCCTCGGTTTCCGTCTCTAACACCCTCCTTCGCTCCTACTCCGGTCTC GGCTTCCACCGACAGGCCCTCGCTCTCTACTCACAGATGCGCCACTTCGACCACCTCACC TTCACCTTTGCCGCCAAAGCATGTGCCGGCCTCCGCCTCAGGCGCCATGGGCGCGCCGTG CACGGCCGCGCCCTCGCCGCGGGCTTCGGCAGCGACGCCTACGTGCAGAACGCGATCGTT TCCATGTATATGCGATGCAGAGACGTGGCCGCAGCGGAGGCAGTGTTCGTCGCGCTGCCG AGCCGAACAACCGTGTCGTGGAATACCGTCATTACCGGGTGTGTCAAGGACGGCCGCGCG GAGAGGGCGTTGGAGGTGTTCGAGACGATGGTTGATCGTGGCGTGTGCATTGACCGTGCC TCTGTTGTTTCAGTGCTGCCAGCTTGTGCACAAGCCAGGGACTTGCACACGGGGAGAGCT GTGCACCGGTTGGCTGTGGTGAGAGGCTTGGGGAAGTATGTCGCGGTGAAGAACGCTCTG ATCGACATGTATGGCAAGTGCGGGAGCCTGGAGGATGCAAGAAGGGTGTTCGATGAAGAC AGCTACGATAAGGATGTTGTTTCTTGGACGGTGATGATTGGTGCATACGTGTTGAATGAC CATGCGAGCAAGGCCTTCGCGCTTGGTTCTGAGATGCTGGTGAGCAGTGAAGCACAGCCT AATGCTGTGACCATGGCGCATCTGCTCTCAGCTTGCGCCAGCTTGCTCTCAGGGAAGCAT GCCAAGTGCACACATGCATTGTGCATTAGACTTGGGCTTGGATCAGATATTGTTGTTGAA ACTGCACTTGTTGACTGTTACGCAAAATGTGGATATATGGGAGTGATAGACATGGTGGTC GAGAAAGGATCACGACGGACTGAAACATGGAATGCAGCAATCTCTGGTTATACTCAAAGA GATCAGGGAAAGAAAGCCCTAGCTCTGTTTAAACGAATGCTTGCAGAATCAGTGCGTCCA GATTCTGCAACGATGGCAAGCGTCATCCCAGCTTATGCAGAGTCCGCGGACCTGGTACAG GCGAATAACATCCACTGCTGCCTACTGGTTCGTGGATGTCTTGTGAGTACAGATATTGCC ACGGGTCTAATCGATCTGTATGCCAAGGCTGGTGACTTGGGTGTCGCATGGGAGCTCTTC CAGTGCTTACCTGAAAAGGATGTTGTTGCCTGGACAACTGTCATCGCCGGATACGGCATG CACGGGCATGCCCAAACTGCCATGCTGCTATATTCCAGGATGGTGGAGCTGGGGGTGATG CCGAACACCGTCACCATCGCCTCATTGCTGCACTCTTGTAGCCACGCTGGCATGGTAGAT GAAGGGCTTCGGCTGTTCAACGACATGCACGGCGTCCATGGCCTGATGCCAAACGCAGAG CACTACTTGTGCCTGGTTGACATGCTTGGGCGTGCTGGGAGGATAGAGGAGGCTTACCGC CGCATCGAAGACATGCCATTTGAGCCGACTGTGTCGGTGTGGAGCTCTCTGCTGGGTGCC TGTGTTCTCCACGAGAATGTTGAGTTCGGCGAGGTCGCTGCTAAACATCTGTTTGAGCTT GAACCGGATAACGTTGGGAATTATGTGCTCCTTGGGAAGGTATATGCTGCAGCTGAGAGA TGGAGCGATGTTCAACATCTGAGGAGAGTGATGGAAGGAATGGATCTTCACAAAGATCCA GGATATTGTGTAGTCGATGCAAAGTCTGAAGTGTGCTGA